Girardinichthys multiradiatus (darkedged splitfin): 124877803
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Entry
124877803 CDS
T08099
Symbol
snx18a
Name
(RefSeq) sorting nexin-18a
KO
K17923
sorting nexin-9/18/33
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124877803 (snx18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124877803 (snx18a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124877803 (snx18a)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
124877803 (snx18a)
Macropinocytosis
Sorting nexins
124877803 (snx18a)
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124877803 (snx18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
XFP
Vps5
SH3_10
Motif
Other DBs
NCBI-GeneID:
124877803
NCBI-ProteinID:
XP_047237300
LinkDB
All DBs
Position
12:complement(20245475..20268459)
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AA seq
573 aa
AA seq
DB search
MALRAKVIYDFHSENQGELSVQEGEILTLVSEQDIEGWLEGSNSRGVRGLVPATYVEILG
SDAALNSYNTSAEPRYSNVTAGGFDKLENISKPPPVGLTSNTAHHNNNKQHSQGSDDDWD
DDWDDSSTVADEPGTVGGRYRDSEGNGTSTYTVTTHTGQRGIAMQAKSSATVGKNLNRFS
TFVKSGGEAFVLGEASGFVKDGDKICVVMGPYGPEWQENPYPFSCTIDDPTKQTKFKGMK
SYISYKLTPTHTPNPVSRRYKHFDWLYARLAERFPVISVPHLPEKQATGRFEEDFISKRR
KGLIWWMNHMTSHPVLSKCDVFQHFLTCTDEKAWKQGKRKAEKDELVGANFFLTISTPPA
PLDFQEVESKIDGFKTFTKRMDDSTMQLNATINEFARKQMGGFKKEYQKVGMSFKALSQA
FEMDQQMYSLGLNHAISFTGDAYEAIGEYFYEQPSKDLDPVMDLLALYQGHLANFPDVIH
VQKGALTKVKESQKHVEEGKMDRAQANGINDRCNIISCATLAEIQHFHHIRVRDFKAQMQ
HYLQQQITFYKKITGKLEEALQKYDNLEIAPTV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggcgctccgggccaaggtgatctacgacttccactctgaaaaccaaggggagctgtcg
gtgcaagagggcgaaatcctaactttggtaagcgagcaggacatagagggctggctggag
ggctccaacagcagaggggtcagaggactggtccccgccacgtacgtggagatcctgggg
agcgacgctgcgctgaacagctacaacacctccgcggagccccgctactctaacgtcacg
gccggaggctttgacaaactcgagaacatctctaaacctcctcccgtggggttaacctca
aacacagcacatcacaacaacaacaaacagcacagccaaggcagcgatgatgactgggat
gatgactgggatgacagctccactgtggcagatgagccggggactgtgggaggaaggtac
cgggactctgagggcaatggcacctccacatacacagtgacaacacacacggggcaaaga
gggattgcaatgcaggcaaagagctcagcaacagtgggcaagaacctaaacaggttttcc
accttcgtgaagtcaggaggagaggcgtttgtgcttggggaggcatcaggttttgtaaaa
gatggggataagatctgtgtggtgatgggtccgtacggtccagagtggcaggagaaccct
taccccttctcctgcactattgatgaccccactaagcagaccaagttcaaagggatgaag
agctacatctcctacaagctgacccctacgcacaccccgaacccagtgagcagaaggtac
aagcacttcgactggctttacgctcgcctggcggagaggtttccggtcatctcggttcca
cacctcccagagaagcaggccacaggacgcttcgaggaggactttatctccaagaggagg
aagggtctcatatggtggatgaaccacatgactagccaccctgtcctgtccaagtgtgat
gtcttccagcactttctaacctgcacagatgagaaagcctggaagcaggggaagaggaag
gctgagaaggacgagctggtgggggccaacttcttcctcaccatcagcactcctccggct
ccccttgacttccaggaggtggagagcaaaattgatgggttcaagacgtttactaagagg
atggatgacagcaccatgcagctcaacgccaccatcaacgagtttgctcgcaagcagatg
ggtggatttaagaaggagtaccagaaggtggggatgtcatttaaggccctgagccaagcc
tttgagatggaccagcagatgtattcattaggtctcaaccacgccatttccttcactgga
gatgcctatgaagcgattggagaatatttttatgagcagcccagcaaagatctggaccca
gttatggatttgttagctctttaccaaggtcacctggcaaacttcccagatgtcatccat
gtccaaaaaggagccctgacgaaggtgaaggagagccagaagcacgtggaggagggcaag
atggacagggcgcaggcaaacggcatcaacgaccgctgcaacatcatctcctgcgccacg
ctggctgagatccagcacttccaccacatccgtgtaagagacttcaaggcccagatgcag
cactatctccagcagcagatcactttctacaagaaaatcacgggcaagctggaagaggca
ctgcagaagtacgacaacttggagatcgctccaacagtttaa
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