KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124878101
Entry
124878101         CDS       T08099                                 
Name
(RefSeq) RNA-binding protein MEX3B-like isoform X1
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmu03019]
    124878101
   04121 Ubiquitin system [BR:gmu04121]
    124878101
Enzymes [BR:gmu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124878101
Messenger RNA biogenesis [BR:gmu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124878101
Ubiquitin system [BR:gmu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124878101
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 KH_2 KH_DEAH11_2nd zf-RING_5 zf-RING_UBOX
Other DBs
NCBI-GeneID: 124878101
NCBI-ProteinID: XP_047237851
LinkDB
Position
12:28220763..28231906
AA seq 675 aa
MMPSSTSLLEADEGESEVPPPLVHAFAGMGLDEHQGSQSQTPEQSDESVSFHHQLPAVTH
FSILGTVLDLKPLPLYRPPSGDEANKTAEDEELEGIAASSSGSLLAKAHRHQHLPSGQSG
TVMEPPHVETVLLYNGDERDDSGGSSSLPPAGSMVMLPHGVYGDSGYEAEHSLLTRRKSV
NTTECVAVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEQPVFVVTGRKEDVAMAK
REILSAAEHFSLIRASRNKTGPLAAVTGLGTPALPGQTTIQVRVPYRVVGLVVGPKGATI
KRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGSCGGVEAPGVDNS
DFQFNGTDVSFETSAHPIGLGEAGWLHAGASSPGGGSLLPVSISGTQRVNSNISSAVRMS
STYRNDSSSSLGSGSSSADSFYGGGNGNRMADFSPTFPFNANANNNNNSTSSSTSFWFGD
SLLGVGSEELFSLGGELSSSGIEPLTISTAHTSQSTAPQHIWSPFVDQQSLQAIDSLQSQ
TSQPGTPRLSPTFSGTEALEHPQAQRVHQRPFGSAGTLDVHRIPSYSSAFSSSSESTTSS
SPPESSFSYRPALGLSGRGQEICIQCMDNQVIAALVPCGHNLFCLDCATQICRGPEAVCP
VCLSPATQAIQLRNM
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgatgccaagtagcacgtctttgttggaggccgatgagggagagtccgaggtcccaccg
ccgctggtgcacgctttcgccggtatgggcctcgacgagcaccaaggcagccagagccag
actcctgaacagtcagacgagagtgtttcttttcatcatcagctcccagcagtaacccat
ttcagcatcctcggtacggtccttgacttgaagcctcttccgctgtatcggccgccctcg
ggggatgaagcgaacaaaacggcagaggacgaagagctcgaagggatagcggccagttct
tctggctcgttgctggcaaaggcccatcgccatcagcacctcccatcggggcagagcggt
accgtgatggaaccgccgcatgtcgagacggtattgttgtacaacggagacgagcgggat
gatagcggcggcagcagctctctacccccggccgggagcatggtgatgctcccacacggt
gtgtacggggactcggggtacgaggccgaacattcgctcctgacccggagaaagagcgtc
aacacgaccgagtgtgtggcagtgcctagctccgagcatgtcgccgagattgttggcagg
cagggctgtaagatcaaggcacttcgagccaagacgaacacctacataaagacaccagtg
aggggagagcagcccgtcttcgtcgtgacgggacgcaaagaagatgtggccatggctaag
agggagattctgtctgcggccgagcacttctccctgatcagagcctcccggaataagacg
ggccctttggctgctgtgactggtttagggaccccggctctacctgggcagacaaccatt
caggtgcgggttccatatcgtgtcgttggactggttgtgggtcccaaaggagcaaccatc
aaacgcattcagcagcagacccatacctacatcgtaactccaagtcgggacaaagagccg
gtgtttgaggtcacggggatgccagagaacgtcgaccgggcgagggaggagatagaggca
cacattgcccttcgaaccggcagctgcgggggggtcgaggctccgggcgtggacaacagt
gatttccagttcaacgggacagacgtcagctttgaaacctctgcgcaccccattggtctg
ggggaggccggatggctccatgcaggtgcatcatcgccagggggtggaagcttgttgcca
gtcagcatcagtggtactcagcgggtcaatagcaatatcagcagcgctgtcaggatgtct
tccacctaccgcaacgacagctccagctctctgggcagcggctccagctcggccgattct
ttctacggcggtgggaacgggaatcggatggccgatttcagccctaccttccccttcaat
gccaacgctaacaacaataacaacagtacaagcagcagcacaagtttctggtttggcgat
agccttcttggtgtggggtctgaagagctcttcagcctgggaggcgaattgtcctcctca
ggaattgagccgttaaccatttccactgcccatacctcgcagtccactgcaccacagcac
atctggagtccctttgtggaccagcagtcacttcaggccattgattcgctgcagtcccag
accagccaacccggcaccccccgtctctctccaactttttccgggaccgaagccttggag
caccctcaggcccagcgtgttcaccaaaggcctttcgggtcagccggcaccctcgacgtc
cacaggatcccctcttacagctcggccttctcctcctctagtgaaagcaccacctcctcc
tcacctcccgaatcctccttctcttatcgcccggcgcttggtttgtccgggagggggcag
gagatatgcatccagtgtatggataaccaggtgatcgctgcattggttccttgcggccat
aacctgttctgtctcgattgtgccacacaaatctgccggggcccagaggccgtgtgccct
gtgtgcctgtccccagctacgcaggccattcagctgcgcaatatgtga

DBGET integrated database retrieval system