Girardinichthys multiradiatus (darkedged splitfin): 124878232
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Entry
124878232 CDS
T08099
Symbol
cspg4ba
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmu00535
]
124878232 (cspg4ba)
04091 Lectins [BR:
gmu04091
]
124878232 (cspg4ba)
Proteoglycans [BR:
gmu00535
]
Cell surface proteoglycans
Others
124878232 (cspg4ba)
Lectins [BR:
gmu04091
]
C-Type lectins
Others
124878232 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
TMEM154
Laminin_G_3
DUF3377
SIT
Motif
Other DBs
NCBI-GeneID:
124878232
NCBI-ProteinID:
XP_047238042
LinkDB
All DBs
Position
12:20180476..20219986
Genome browser
AA seq
2408 aa
AA seq
DB search
MDSAGINTKKKKLWLCGLLWWSLLLELTSGASFYGDGFIQLKATESSDHNVLRTRFRTSS
TDGLMFLAAGQANYFLLELHAGRLQMKLDIGSGEQVLESEQGIQLNDLAWHSVEVHHVQL
NVTMTVDKNSHTSIKMPGSHHYLHIKDGLYVGGSGGLDKIYLPRDLISFRGCMDEMVFNQ
HDLLSSLRPYTGYKNIYEVSLGCNPQFFANDEDPISFFSSRAYISLPTWNHHHQQATFEC
VVHTSAKEGVILYSSARDGGFVALEIQEGFPVAVVGKGGVKTELHSQTSISDRKWHSLKL
HFSSKNLELTVDKEMVKSSIISHSKRLHLKGFLFVGGIDDGTRLEVRKVGLVSVSGKRVR
GGSFKGCLRNIEINRVKMGLSNAVVTKDISVGCEPDKPAEEPSPVSPTSTPSPVLYIATP
TPSLQMSTLAVGLDKRYGSDFVHLKNLVVQEGGRASLEAKHIKIFLDFKMLGIRQSQIMF
RIEEQPVRGQIRLDVDEDQEENTFSMLDLWHGRVIYVHGGSEELDDFFMFSVSCSSRKPV
PDYLKGSKLYRYNITVTPTNDAPELSLPEGNLFVLLEKSKKHLTTEVLKATDIDSNYTDL
VFSVLGNLNADAGYLEIESNPGKAETSFSYVDLDEMRVFYVHTDVRNSRIVLRVSDGDKV
SNTVVLRVMAVELEYKIANNTGLEITQGETAIISSKQLAMQTNAIKQIVDIRYDIIEPPE
FGELQRLHSSGEWRRTDSFLQRLLEKERLRYVSTFQDIQSSNVTDYFKCKVNVAGRANTE
LLFPIAVNWVKYQLVRNVMINMDKVRKVTLNSEYLLARAEGVALSDDVLYFRVLTTPKKG
KLLLDNTVLMKNSTFSQRDLTDEKVHYELVDRPYEDTTDRFKFQLVSKHAQSENYDFQFS
IKADINTVFMRNKGLSLQEGEGKLITKDELFAETLSTRDMFYTVISSPKHGRLARISQSN
SNASYDNILTFSNQDILQERLMYIHDDSETTRDNFTFIASTSQGFKSSILDDEVGSKEGT
FNISVQLVNDQKPIRIIDKVFHVVRNGQKLLTTEDLFYHDADSDFEDGQLIYTRRGIPIG
DLVLVNDTSHRLFQFPQKDLEEKRVLFIHKGASTGRFVLFVSDGKNFVSGLLDISAYDPF
LKAGNNTGLLVQKGQSVTFTSNNFSIISNLDIRDDQEVIMKLEEPPRYGGLYRNKTKVES
FTQSDLKDGLIFYRHDDGKHLADHFNVTVNAKGQQITQRVNVKVYLESHQRPPIIQHQET
LLVEEGKPVKFDETKLEVTHEDNLPSEIVFAVKVAPSHGFLRRFVEAEERYIGTKQSPVE
TFTQADINKGNIQYVQVEPYKVNDTFVLDATNGVTDVSNIRIPVDIIPLLIPLHVTNFTI
NEGASKALTEDVLKVTTRHFSGLNFFYNLTKPPHHGYIEHSQHPGVPITTFTRRQVEHEF
IYYVHDSSETLVDNFTVEAHDTGLRKQSAAQTAYIELTAVNDEPPVITANKVLRVWVSSV
TEITLEDLRAEDLDTPADELHFMVTPPSNGHLALKSNPMKAVLNFTQAHIDQGQLLFVHK
GAMSGGFNLQVNDGVNFTPRQIFSITAKALVVNLEKNRPLKVFPGSSRPITNEDLQAVTN
DVANPSNRTITFNMVRHPKLGRLARKQSNNSTVDISTFTQDMVDRKEVIYIQTPIELVGW
EAVDSITFSVMSPPASIDSQTFKIDISYENKRPEHNTVLIKNTGAEVTEGENVIIDEYKL
DASNLMSKLPTPERSSYEVWFQVTDLPQHGVIVVGERNLTQEKPNFSQFIVTKYGIVYSH
DNSETTHDSFVFGAWLNPKGRTAQRPQDEKDVIVERFNITVRPVNDQPPVLKTKTPGLKV
VQGDRVAIGPEDLRVEDLDDPPGDITFSVISKPSNGYLALRGGLNESVVAFTQAQINNRS
VYFIHDGSSASGVFYFSVTDGHHKPVYKLFNIDVSEITITLLNYTGLSLQQGKTVAALTQ
DNLAAETNGKSVSIHYMITKPPSFGKILKENQEVTHFTQEDLLAGSLAYHMTSLSSAEDS
FEFTAFTLEANLTGQLLNITVRPLIQVAQGLKIPNGIPVRLNTSFFNVSELAAISDSDPV
FEIMSHPKFGKVVQTSSKRSRKFVPAVSFTFQEVMQEKIALELNGNMTGVEELNDSLVFV
LKADNVQPAKGEFYFTVVPYNPVAIPSTKSPVPTTSPIPQTPVRIFRNGTASPVPSTVFH
PTHQPSKNQQKFKGRNRWGNSNRTSFFSTTLGKPPRTEEFPFRNTPVRVESYPQKTSNPL
LIILPLLALLLLIIIFVVVVVYFRHHRQRKQNTSSPQENPFSVPPNSESHSSLTQRSTTF
PTVTVTPLNPTYSASPVLGRFLASNQASPYDTADSNVLVSSWSNGSLEPTSQIIHAVTPT
LQRNQYWV
NT seq
7227 nt
NT seq
+upstream
nt +downstream
nt
atggactccgctgggatcaacaccaagaagaagaagttgtggctctgcggtctcctttgg
tggtcgctcctgctcgaactgacgtctggggcttctttctacggggatggcttcatacag
ctaaaggcaacagagtcgtcggaccataatgtgctccgtactcgcttccggacctccagc
accgacggcctgatgtttcttgctgccggtcaggcaaactacttcctactagagctccat
gctggtcgcctgcagatgaaactggatattggatcaggggagcaggttttagagtcagag
cagggtattcagctcaacgatttggcctggcactcagtggaggtccaccatgtgcagtta
aatgtcactatgactgtcgacaaaaactctcatacaagtataaagatgcctggctcccat
cactatctccacattaaagatggtctttatgttggaggctcgggaggtttggacaaaatc
tacctccccagagacttaatcagcttccgaggctgcatggatgagatggtgttcaatcaa
catgacttactgtcatcactgaggccctacactggatacaaaaatatttatgaagtctcc
ttaggctgcaatccccagttcttcgccaatgatgaagatcctatcagttttttcagttcc
agggcctatatttcccttccaacttggaatcatcatcatcagcaggctacgtttgagtgt
gttgtgcacacctcagccaaagagggagtaatcctttacagttcagctagggatggaggc
tttgtggctctggagatacaggaaggttttccagtagctgttgtagggaaaggtggagtc
aaaactgagctacattctcaaacatccatcagtgacagaaaatggcattctcttaagttg
catttcagttccaaaaaccttgagctgacagtggataaagaaatggtaaagagcagcatt
atctctcactcaaagaggcttcatctcaaaggttttctttttgttggaggtattgatgat
ggtaccaggttagaggtgagaaaggttggtcttgtttctgtatcaggaaagcgtgtcaga
ggtggttccttcaaaggatgtttaaggaacattgaaataaacagagttaagatgggtctc
tccaatgcagtagtcaccaaagatatctcagtaggttgcgaaccagataaaccagctgag
gaaccaagccctgtgagtcctacaagtacgccaagtccagttttgtacattgcaacacca
acaccatctcttcagatgtcaacccttgcagttggcttggacaaaaggtacggctcagat
tttgtgcatcttaaaaatcttgttgtccaggaaggtggtcgagcctctcttgaggccaaa
catattaaaatattcctggacttcaagatgcttggtattcgacagtctcaaattatgttt
agaattgaagagcagccagttagaggtcagataagacttgatgttgatgaagaccaagag
gagaacaccttcagcatgttggatctttggcatggtagggtgatatatgtccacggaggc
tctgaggagctagatgacttcttcatgttctcagtatcttgtagcagcagaaaaccagtt
cctgattatctgaaaggcagcaaattataccgctacaacataactgtgacaccaaccaat
gatgcacctgaattaagccttcctgaaggaaatctctttgtcttattggaaaaatctaag
aaacatctcaccacagaagttctgaaagcaacagacattgacagcaactacaccgacctt
gtattctctgtactggggaatttgaatgctgatgcaggctacttggaaatagagagcaac
cctggcaaggcagagacttcattctcatatgttgatctagatgaaatgagggtgttctac
gtccacacggatgtgagaaactcgaggatagttctgagagttagtgatggagacaaggtc
agcaacactgtagttttaagggtcatggctgtagagctggaatacaagattgccaacaac
actggtcttgagatcacccaaggagaaactgctattattagttcaaagcagttggccatg
caaacgaatgcaataaagcaaattgtagacatccgctacgacatcattgaaccaccagag
tttggagaactccagagacttcactcaagtggtgaatggcggcgcactgactcattcttg
caaagacttcttgagaaagagcgacttaggtacgttagcacctttcaagatatccagagc
tccaacgtcactgattattttaagtgcaaggttaatgtggctgggagagcaaacactgaa
ttacttttcccaattgctgttaactgggtgaagtatcagttggtgaggaatgtcatgata
aatatggataaagttagaaaagtgacgcttaactcagagtaccttcttgcgagagctgaa
ggtgtggccctctcagatgatgtcctttattttcgggttctcactacaccaaagaaaggg
aaactcctgcttgacaacacagtcttgatgaagaactcaacctttagtcaaagggatcta
acagatgaaaaagtccattatgagctcgttgacagaccttacgaggacacaactgacaga
ttcaaatttcagctggtctctaaacatgctcagtctgaaaattatgattttcagttttca
atcaaagccgatatcaataccgtgtttatgagaaataaagggctctcccttcaggaggga
gaaggtaaacttatcaccaaagatgagctctttgcagagactttaagcacaagggacatg
ttctacacagtcataagcagccccaaacatggaaggctggcccgcattagtcagtcaaat
tccaatgccagctatgataacatcttgacctttagtaatcaggatatcttgcaggaacga
ttaatgtacatccatgatgacagtgaaactacacgggataattttacttttatagcctct
accagccaagggttcaagtcttccattctggatgatgaagttggctccaaagaaggaacc
ttcaacatctctgttcagttagtaaatgaccaaaagccaattcgaatcattgataaagtt
ttccatgtagtaagaaacggacagaagctactcactacagaagatttgttttatcacgat
gccgactctgactttgaggatggccagctcatttacacccgacgtgggataccaattgga
gaccttgtgctggtcaatgacacctctcatcggctgtttcagtttccacaaaaggacttg
gaggaaaagcgggtgttgttcattcacaagggtgctagcactggcagatttgttcttttt
gtgtcagatggaaaaaattttgtatcaggccttttagacattagtgcttatgaccctttc
ctgaaggctggcaacaacacgggtctgttggttcagaaaggacagtcagtaacatttacc
tccaacaatttcagcatcatatcaaatttggatatccgagacgaccaggaggtcattatg
aagttggaagagcctcccagatacggcggtctttatcgtaataaaacaaaggttgagtca
ttcacacagtccgacctaaaggatggcctgatcttctacaggcatgatgatggcaaacat
ctggcagaccatttcaacgtgactgtgaatgccaaaggtcagcaaattacacagagagtt
aatgtgaaggtctatctagaaagtcatcagaggccgcccatcatacagcatcaggagact
ttactggtggaagagggaaaaccagtgaagtttgatgaaactaaactggaggtcacccat
gaggacaacctgccatctgagattgtgttcgcagtcaaggttgctccgtctcatggcttt
ctccggcgctttgtggaagctgaggagcgctacatcggaaccaagcagtcgcctgtcgag
acgtttacccaagctgacatcaacaaggggaacatccagtacgttcaggtggagccgtac
aaagtaaacgacacctttgtcctggatgccaccaatggtgtcactgacgtcagcaacata
aggatacctgttgacatcatcccactgctcattcctctgcacgtcaccaatttcaccatt
aatgagggcgcctcaaaagcactgacagaggatgtgcttaaagtcaccactaggcacttt
tctggattgaacttcttttataatttgacaaaacctcctcaccacggttacattgagcac
tctcaacatcctggtgtgcctataaccactttcaccaggaggcaggtggagcatgaattt
atttactacgtccacgacagcagcgaaaccttggtcgataattttacggtggaggcccac
gatacagggttaaggaagcagagtgccgcccagacggcttacatcgagcttacagctgtt
aatgatgagcctcctgttattacagccaacaaggtcctcagggtttgggtgtcatcagtt
acagaaatcacactggaggatcttagagccgaggaccttgatactccagcagatgagcta
cacttcatggttaccccacccagcaatggacacctggcccttaaaagcaacccaatgaag
gcagtgctaaacttcacacaagcccacatagaccaaggacagctgctgtttgtccacaaa
ggtgccatgtcggggggatttaaccttcaagtcaatgatggtgtgaattttactccaagg
cagatcttcagcattaccgccaaagctttagttgtgaatttggagaaaaaccgcccactc
aaggtgtttcctggttcttccagaccgatcactaacgaggatttacaggctgtgaccaat
gatgtcgccaacccctctaaccgcacgattacgttcaatatggttcgtcatcctaaactg
ggacgtttagcaaggaagcagtctaataactccacagtggatatctccacttttacacaa
gatatggtggacagaaaggaagttatctacattcaaacgccaattgagttggtgggctgg
gaagctgtggattctataaccttctccgttatgtcaccacctgcctctatagacagtcag
actttcaaaatagacatctcctatgaaaataaacgacctgaacacaacactgtcctcatc
aaaaacacaggtgctgaggtgactgaaggggagaacgttatcattgatgaatacaagctg
gatgcctctaacctgatgtccaagctgcccacaccagagcggagctcctacgaggtctgg
tttcaggtgactgatctgcctcagcacggcgttatcgtggtaggtgagagaaatctcacc
caagagaaacccaacttttcccagttcatcgtcaccaaatatggtatcgtctacagccat
gacaactcggagacaactcatgattcttttgtattcggtgcttggttgaatcctaaaggc
agaactgcccaacggcctcaagatgagaaggatgttattgttgagcgttttaacatcaca
gtcaggcctgtgaacgatcaaccacctgtgctaaaaactaaaactccaggtctaaaggtg
gtacagggagacagagtagccatcgggccagaggatctcagagttgaagacttggacgat
cctccaggggatattacattctctgtgattagcaaaccaagcaacggttaccttgctctg
cgaggaggtttgaatgagtcagtggtggccttcactcaagctcaaatcaacaacagaagc
gtctattttatccatgacggaagctctgcctcaggcgtgttttacttcagcgtcacagac
ggacatcacaagccagtatataaactttttaacatagatgtgtcagagatcaccatcact
ctgctcaattacactggattgtcactgcagcaagggaagactgtggcagctctgacccag
gacaaccttgctgcagagaccaatggcaaaagtgtcagcatccactacatgattacaaaa
cctcccagctttggcaaaattctcaaggaaaaccaggaagttacacattttacacaggag
gatcttttggctggaagcttggcctaccacatgacctcactgtcctccgcagaagacagc
tttgagttcactgccttcactttggaggcgaatcttaccggtcaactccttaacataact
gtcagacctctgatccaggttgcccaaggattgaagattcccaatgggatccctgtcagg
ctcaacactagcttttttaatgtgtctgaactggctgctataagtgatagtgaccctgtg
tttgaaattatgtcccatcctaagttcggaaaggttgttcagacaagttctaaaaggtcc
aggaagtttgtcccagctgtgtccttcacatttcaggaagtgatgcaggaaaaaattgca
ttggagctgaatggcaacatgactggagtcgaggagctgaatgattcccttgtgtttgtg
ctgaaagctgataatgtccaacctgctaaaggggaattttactttacagttgtcccctac
aatccagtagctattccatccacaaaaagcccagtcccgaccacatcacccattcctcag
acaccagtcaggatttttaggaatggcactgcttcccctgtcccgtctacggttttccat
cccacccaccaaccgagcaaaaaccagcagaaattcaagggccgtaaccgctgggggaac
tcaaacagaactagctttttcagcacaacccttggaaagccgcctcgaacagaagagttt
cctttcagaaacacaccagttcgagtggagtcctatcctcagaaaacctccaacccactc
ctcatcatcctgccacttctggcccttctgctgcttataattatctttgtggtcgtggtc
gtctattttcgacaccaccggcaaaggaagcagaacacctcttcacctcaggaaaatcct
ttcagtgttcctcccaacagtgagtcccacagcagcctaacccagaggagcaccacattt
cccactgttactgtcactccattaaatcccacctactctgccagccctgtgcttggtagg
tttttggcctcgaaccaggcttcaccttatgacactgctgattcaaatgtactcgtcagt
tcttggagtaatggttcccttgaaccaacttcccaaattattcacgccgtcaccccaact
ttgcagaggaatcagtactgggtataa
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integrated database retrieval system
