Girardinichthys multiradiatus (darkedged splitfin): 124878790
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Entry
124878790 CDS
T08099
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124878790 (ctcf)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124878790 (ctcf)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124878790 (ctcf)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124878790 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_ZN142
zf-C2H2_15
zf-C2H2_ZNF142_18
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
124878790
NCBI-ProteinID:
XP_047238859
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All DBs
Position
2:10048808..10069948
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AA seq
833 aa
AA seq
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MDGGSTEAVGEVDAPPKDFPSIQAVHSQDAMVVDLLQQAAEAGGVVQGQTAVVLEQGHVE
AMVAATQSQQALLEAEVGVSVQRGGVEMLVMDPLDPTLMHMKTEVIDAAVGGSSATVGMV
GAVAGAAHQATMTTVDQTQIITLQVVNMEEQAALGLGELQLVQVPVSAATVGALQQGTYV
DTTTMPKAGAPVICHTLPLPEGFQVVKVGANGEVETVEQEEGVEAHPEEDEEDEEVGQQL
LDEVDEPVQAPNDDQNWIKDPDYQPPSGVVKKSKKGKKSRLRYAEGDKDMDVSVYDFEEE
QQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDE
RPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEKPF
KCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYI
CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIETGKKCRY
CDAVFHERYALIQHQKSHKNEKRFKCDLCDYCCRQERHMVMHRRTHTGEKPFACSQCEKT
FRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNTMARHSENCNGEVEEFENGALTP
KKERRGRKRKMRNRRDEDDSEDDTPEQDEGEDEGEDEAALLQEEEDLENMELDQAPAVIP
VVAPDEPPVKRKRGRPPKNPKPQTPSKSGTTTSVAAAIQVEDELTGAVENIIVKKEEGDG
TTSLKQGVGLTVEGGVGGDEGVETVELTVNEETTAASANGDLTPEMILSMMDR
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgggtcaacagaagctgtaggggaggttgatgccccccctaaagacttccca
tcgatacaggcagttcacagccaggatgccatggtggtggacctccttcagcaggctgca
gaggctgggggcgtggtgcaaggacagactgcagttgttctggagcaaggtcatgtagaa
gcaatggtagcagctacccaatcccagcaggcactgctggaagctgaggtgggggttagt
gtacaacgtggaggtgttgaaatgctggtcatggaccctctggatcccaccctgatgcat
atgaaaactgaggtgatcgatgctgcagttggggggtcatcagccacagtcggaatggtt
ggagcagttgcaggcgcagctcatcaggctactatgacaacagtggaccagactcagatc
atcaccctacaggtggtaaacatggaagaacaagctgccttgggtctgggggagctacag
ctggtccaagtgcctgtttctgccgccacagtgggtgctctgcagcaaggcacatatgtg
gacaccaccacgatgccgaaagccggagccccagtcatctgtcatacacttcctctgcct
gagggttttcaggtagtcaaggttggtgctaatggggaggtggagactgtggagcaagaa
gagggagtagaagcccaccctgaggaggacgaggaggatgaggaggttggacagcagctg
ttggatgaagtagatgaacctgttcaggcgcctaacgatgaccaaaactggattaaagat
ccagactatcagcctccatctggagttgtcaaaaagtccaaaaagggtaaaaagagccgt
ctgcgctatgctgaaggagataaggatatggatgtgagtgtctatgactttgaagaggaa
cagcaggagggccttctatctgaggtcaacgcagagaaagtagtcggcaacatgaagcca
ccaaagccgacaaagatcaagaagaaaggagttaagaagacgttccagtgcgagctgtgc
agctacacgtgtcctcgccgctccaacctggaccgtcacatgaagagccacaccgatgag
aggcctcacaaatgtcacttgtgtggaagagcctttaggacggttactctgctgcgaaac
catctgaacacacacacagggactcgaccacacaagtgcacagactgtgacatggctttt
gtgaccagtggagaacttgtgcgtcatcgtcgatacaaacacacacatgagaaaccgttc
aaatgctccatgtgtgactacgccagtgtggaggtgagcaaactgaaacggcacattcgc
tcccacactggtgagcggcccttccagtgcagtctgtgcagttacgccagcagagacacg
tacaagctgaagagacacatgaggacacactcgggagaaaaaccttatgagtgctacatc
tgccatgcccggttcacccagagtggaaccatgaagatgcacattctgcagaagcacaca
gaaaatgtggccaagttccactgtccacactgtgacacggtcattgcacgcaagagtgac
ttaggggtccatctgcggaagcagcactcattcattgagactggaaagaagtgccgatat
tgtgacgctgtttttcatgagcgctacgctctaattcagcatcaaaagtctcacaagaat
gagaagaggttcaagtgtgacttgtgtgactactgttgccgccaggagcgccacatggtg
atgcatcgtcgaacccacacaggagagaagccatttgcatgcagccagtgtgaaaagacc
ttcaggcagaagcagctcctggacatgcacttcaaacgctaccatgatcccaactttgtt
cccacagcttttgtttgccccaagtgtagcaagacattcacacgcaggaacaccatggct
cgtcattctgagaactgcaatggggaggtggaggagtttgagaatggagctcttacccca
aagaaagagaggaggggaagaaagaggaagatgaggaacagaagggatgaggacgatagt
gaagatgatactcctgaacaagacgagggtgaggatgagggtgaggatgaagcagcgttg
ctacaggaggaggaggacctagaaaacatggaactagatcaagcgcccgctgttatccca
gttgtggctcctgatgaacctccggtgaagaggaaacgaggaagacccccaaaaaacccc
aaacctcagactcccagcaaatctgggacaactacgtctgttgctgccgctattcaggtg
gaggatgagctaacaggtgcagtggagaacatcatagtaaagaaggaggagggcgatgga
acgacttctctgaagcagggagtgggcctgactgtggaaggaggggtgggaggtgatgaa
ggggtggagacggtggagctgactgtgaatgaggaaacaacggcagcttccgctaatgga
gatctcacaccagagatgatcctgagtatgatggaccggtga
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