Girardinichthys multiradiatus (darkedged splitfin): 124878869
Help
Entry
124878869 CDS
T08099
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124878869 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124878869 (snx27a)
Membrane trafficking [BR:
gmu04131
]
Protein recycling
Others
Others
124878869 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
124878869 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
VirE3
SNX17_FERM_C
SNX17-31_F2_FERM
DarA_N
USP7_C2
RBD
Motif
Other DBs
NCBI-GeneID:
124878869
NCBI-ProteinID:
XP_047238994
LinkDB
All DBs
Position
13:37624427..37640535
Genome browser
AA seq
558 aa
AA seq
DB search
MADVGGDEIHPTASRYNGPVVGSSAGQNAATVTSGPRIVRIVKSESGYGFNVRGQVSEGG
QLRSINGELYAPLQHVSAVLPGGAADRAGIAKGDRILEVNGVNVEGATHKQVVDLIRAAE
KELVLAVLSVPPQEADGLEGGEDVQPNYDYSDKQAVPISIPTYKHVEQHSERFVVYNVYM
SGKQLCSKRYREFSILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEYLERVC
SVRVIGESDIMQEFLSESDENYNGVTDVELRIVLPDKTTISVRVRKNSTTDTVYQALVLK
VGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSIREE
ELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRTCEGYNEV
VFPHCSCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWAEMQRWDTDEEGMAFC
FEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCSNSEYLPP
LETQQKGWRHLGGEIATS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttggaggcgatgaaattcaccccaccgcgtcccgctacaacggtccagtc
gtcggttcgtccgcgggccagaacgcagcaacggtaacgtctggtcctcggatagtgcgg
atcgtcaagtcggagtctggctacggtttcaatgttcgcggtcaggttagcgaaggaggg
cagctccggagcatcaacggggaactgtacgctccccttcagcacgtcagcgctgttcta
cccggaggtgcagcagaccgagcggggatagcgaagggggacaggatccttgaggtgaat
ggggtgaacgtggaaggtgcgacccataagcaggtggtggacctgatccgtgcagcggag
aaggagctggttctggccgtgctgtctgttccacctcaggaagctgatggattagaagga
ggggaggatgttcagcctaactatgactacagcgacaagcaggctgtgcccatttccatt
cccacgtacaaacatgtggagcagcactcggagaggtttgtggtgtacaacgtgtacatg
tcgggcaaacagctgtgctcgaagcgctatcgagagttttccatcctgcaccagaaccta
aagagggaattctccaacttcaacttcccaaagcttcctggtaaatggcccttctctctc
tccgaacagcagctggatgctcggcgtagaggtctggaggagtatctggagcgagtgtgt
tctgtgcgggtgataggggagagtgacatcatgcaggagtttctctctgaatcagacgag
aactacaatggagtcacagatgtggagctgcggatagtgctgcccgacaaaaccaccatc
tctgtcagagtgcgtaaaaacagcacaacggacacagtgtaccaggcgttagtcctcaag
gttggaatggacagtattatggcaagctactttgctctttttgaagtcatcaaccattct
tttgtgaggaagctcgccccaaatgagttcccccacaaactttatgtgcagaactacaca
tcagctgttcctggaacatgcttagcgctccgcaaatggttgttcagcatccgagaggaa
gagttgctcagagataacccgctggcactgcactactgcttccaccaggcactggacgat
gtgaagaagggattcataaaaacggaggacaaatcctaccagctgcagaaactggcagag
cagcgcaagatggccacatacctcagcctgctgcggacatgtgagggctataatgaggtg
gtcttcccacactgctcctgtgactccaggaggaagggccatgtcatcacagccatcagc
atccatcacttcaagctgcacgcgtgcaccgaggacggcaccctggagaaccaggtaata
gcttttgagtgggcagagatgcagcgctgggacactgatgaggaaggcatggctttctgc
tttgagtacgccagaggagaaaagaaacctcgctgggttaagattttcactccatatttc
aactacatgcatgaatgcttcgagcgtgtcttttgtgagctgaagtggaggaagcaggtg
gaggaagaggcttctgataaagacaacaaaaactgcagcaacagcgagtatctgcctcct
ctggagacgcaacagaagggatggcgccacctagggggggaaatcgcaacgtcctaa
DBGET
integrated database retrieval system
