Girardinichthys multiradiatus (darkedged splitfin): 124878960
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Entry
124878960 CDS
T08099
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124878960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124878960
03021 Transcription machinery [BR:
gmu03021
]
124878960
Transcription factors [BR:
gmu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124878960
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
124878960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
124878960
NCBI-ProteinID:
XP_047239133
LinkDB
All DBs
Position
13:complement(29093223..29218211)
Genome browser
AA seq
748 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSSLVPRSSPDIRMSKAPGEEKPGAKYPGDSSDSDRN
SPDDQLQVQTMKSSPYNLSPSAAGSKVKSEESSEITHSTAAPPSQQQQQQQQQQQQAQHH
HTQLMLAGSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAAHAAAQQQANQQQ
QQQPQQQQPNKQEQPVQAPPPQLALSQPIQLTAQDIQQLLQLQQLVLMPGHPLQSPAQFL
LSQPTQAQQPQQGLLSTANLIQLPQQSAGGLLTSPPRMGLQAQREKSSDAGNSSGSSAAS
VAASGSSSGVTSVGATSASSSAMASSLTSGLNPGGQTAHMSEEPSDLEELEQFARTFKQR
RIKLGFTQGDVGVAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLGDAETMAV
DSMLPSPSSISSPLLGIEGLPGRRRKKRTSIETNVRVALERNFSTNQKPTSEEILLMAEQ
LNMEKEVIRVWFCNRRQKEKRINPSSSSTPPLPSQTSPVVTHKAHCYSPHMISSQSLSQV
TTSLSTTGASLSPSASCPMTPVSSVVMSSSVTPPPLPPHSTASPAPSSLGTSGLTTGNTM
IGVSAGMNQALIGSNPLATMQALAASGGQLPISGLEGGPGHMFLSGHGGHSVPPSLRSSL
FLNRPSLLPMVTGSTATSSMPTMGLVSSSGGGGCGPRLTYCQSSPTGTSNLMSPTSCPEE
SASPCSSPASFCSFSEASPPPLGGAMAE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccccctgccggtccccttcgtctttcagagaacagcgtccgacttcagcgcc
tggagactcaagtcctcgctggtcccgcggtccagccccgatatcaggatgtccaaagca
ccgggggaggagaagccgggagctaaatatccaggtgacagttcagactctgacagaaac
agtcctgatgaccagctgcaggtccagacgatgaaaagcagcccttacaacctttctccc
tctgcagcaggcagcaaggtaaagagcgaagagagctcagagataacacacagcactgct
gctcctccctcccagcagcagcagcagcagcagcagcagcagcagcaggctcagcatcac
cacacacagctgatgctcgcaggcagtcagctcgcagggcttgctgctctcctcccggcc
cagcagcagctgctcctccagcaggctcaggctcagctcctggcggctgccgttcagcag
tcaaacgccgctcacgctgccgcccacgccgccgcgcagcaacaggccaatcagcagcag
caacaacagcctcagcagcaacagccaaacaaacaggagcaaccagtgcaggctccgcct
ccacagctggctctgtcccagcctatccagctcacagcgcaggacatccagcagctgctg
cagctccagcagctggttctgatgccgggtcatcccctccagtccccagcccagttcctc
ctttctcagcctacacaggcacagcagccacagcagggtttgctctcaacagcaaatctg
atccagctacctcagcaaagtgcaggaggacttcttacaagcccacctcgcatgggactc
caagcacagagggagaagagcagcgatgcaggaaacagcagcggcagcagcgcagcctct
gtagcggccagtggaagcagcagcggtgtaacatctgtaggagctacctccgcatccagc
agtgccatggcctcctccctaacctccggcctgaaccccggcggtcagacagctcacatg
agtgaagaaccgagcgatctggaggagctggagcagttcgcccgaaccttcaaacagcgg
cgcataaagctgggattcacgcagggtgatgtgggagtggccatgggaaaactttatgga
aatgacttcagccagaccaccatctctcgctttgaagcactaaacttgagctttaagaac
atgtgcaagctgaagccgctgctggagaagtggctaggtgacgcagaaacgatggcggtg
gacagcatgctgcccagcccctcctccatctcctcccccttgctgggcatcgagggcctt
cccggccggcgcagaaagaaacgcaccagcatcgagacgaacgtacgagtggctctggag
cgcaacttcagcacgaaccagaagccgacgtcggaggagatcctgctgatggcagagcag
ctcaacatggagaaggaggtgatccgtgtttggttctgcaaccgccggcagaaggagaaa
cgtatcaacccatctagcagcagcactcctcccctgcccagccagacctcgcctgttgtg
acgcacaaagcccactgctacagcccccacatgatatcgagtcagagtctgtcccaggtc
accaccagcctcagcacaacaggagccagtttgtcaccttcagcttcctgccccatgact
cccgtcagctcggttgtcatgtcctcgtctgtgactcctcctcctcttcctcctcacagc
acagccagcccggctccttccagcctcgggacatctgggctcaccactgggaacacaatg
ataggagtaagtgcagggatgaaccaggccctcattggcagtaatcctctggctaccatg
caagcgctggcagccagcggcggtcagctgcccatctctggcctggaggggggaccgggc
cacatgtttctgagtggacatggtggtcactctgtccccccctccctccgttcttctctc
ttcctgaaccgccccagcctcctgccaatggtgactggctcaacagcaacttcctccatg
cccaccatggggctggtcagcagcagcggaggtggcggctgtggacctagactcacctat
tgccagtcttcacccactggcaccagcaacctcatgagccccacttcatgcccagaggag
tctgcgtctccctgttcaagtcccgcctctttctgctccttcagcgaagcttcgccgccg
cccctgggaggagccatggctgaatga
DBGET
integrated database retrieval system
