Girardinichthys multiradiatus (darkedged splitfin): 124879012
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Entry
124879012 CDS
T08099
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124879012 (vps50)
Membrane trafficking [BR:
gmu04131
]
Protein recycling
Others
EARP complex
124879012 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
124879012
NCBI-ProteinID:
XP_047239220
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Position
13:complement(20110816..20269104)
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AA seq
992 aa
AA seq
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MQKIKSLMARQGLKSPQESMADLSPVENLRIPSTEELRELRQQPIDPQAEQEIIDSIEEV
YFSNDSFDMVRHELEKLPPELNLQELEEYREKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTALQTNLQLGAVICTNARRQLRVAKEEFTEASLGLLANQKRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVLHYTKVQKAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLMDLCKALWEVMLSYHRTMQWHEEHDKQKATSSQDD
AAAEPDESTVDRSYVKKKLEHGLTRIWQDVQLKVKVYILGTDMSNFKYDDFIVVLDVISR
LMQVGEEFCGSKSEVLQESIKRQSVNYFKNYHRARLEELRMFLENETWELCPVKSNFNID
QLHEFKFMGQCRSPSVSPSRQAASSVSPALEEPSLFQQYHQDGNPFEMHIEHKEEETEDV
LASNGYESDELEKSVYQDYDSDSDVPDELKQDYVDEQTGDAPLKSVSRETIRSKKKSDYN
LSKASAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRND
MPVPSPSLPTYSGREAAPARVVGPACLYESSGLGLISSRLRTTLNRIQESLIDMDSVGEN
AGVHGPPEDRKEKVPSPHLSQMVVLTDSATLYGLAQRVVATESLVFLAEQFESLQFHLDT
MMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLMMAGVKWDIKEIMSQH
NIYVDVLLKEFEQFNKRLSDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSNE
GRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQL
ANLVNVCLGSHINKRARQKLLAAIDDIDRPKR
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagataaagtctcttatggcccgacagggcctcaaaagcccccaggagagcatg
gctgatctaagtccagtggagaacctcaggatccccagtacggaggagttgcgggagctg
aggcagcagcccatcgacccccaggcggagcaggaaatcattgacagcatcgaggaggtc
tacttttccaatgactccttcgacatggtgcggcacgaactggagaagctcccacctgag
ctgaacctgcaggagcttgaggagtacagagaaaagctcaagagacagcaggctgcagtt
tctaaaagggtcgccgatctcattctggagaaacagccttcttatgtcaaggaactggaa
agagtaacagcattacagaccaatctacagctgggagcagtcatttgcactaatgcaaga
agacaactcagagttgcaaaggaggagttcacagaggccagcctgggtctgttagccaat
cagaagagacgacagctgctgacaggcctcctcaagtctcttaggaccatcaagactctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctagaatgtcagaaggctgccagcaccttcaaacactacagctgcatcagt
gagctgaactctaagcttcaagacactcttgagcaaatagaggagcagcttgatgtcgcc
ctgtcaaagacttgtaagcactttgatgtgttgcactacaccaaggtccagaaggcctac
acgctccttgggaaaacccagactgcaatggatcagctacacatgcacttcacccaggcc
atccacaacacagtgttccaggtcgtgctgggatacgttgagctgtgtgctggcaacgcg
gacaccaagttccaaaagatgcagtataaggacctctgcacgcacatcaccctcgacagc
tacattccctgcctgatggatctctgcaaggctctgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcatgaagagcatgacaaacagaaggccacatcctcacaagatgat
gcagcagcagagcctgatgagtcgaccgtggaccgcagctacgtgaagaagaagctggag
cacggactaacgcggatctggcaggatgtccagttaaaggtgaaggtgtacattctggga
acggacatgtccaacttcaaatacgatgatttcatagtggtactggatgtcatcagcagg
ttgatgcaggttggtgaggagttctgtggcagtaagtcagaggtcctgcaggagtcaata
aaacgccagagtgtgaactacttcaaaaactatcacagggcacgactggaagagctcagg
atgtttctggaaaatgagacgtgggaactatgtccagtcaagtccaactttaacattgac
cagctccatgagttcaagtttatgggccagtgtcgctctccctccgtttccccaagcaga
caggctgcgtcgtcagtttccccggccctggaggagccgtcccttttccagcagtatcat
caggacgggaacccctttgagatgcacattgagcacaaggaagaggagacggaggatgtg
cttgcttctaacgggtacgaatcagacgaactggagaagagtgtctatcaggactacgac
agtgacagcgatgtccccgatgagctcaagcaggactacgttgatgagcagacaggcgat
gcccctctgaagagcgtgtcccgggagaccataagaagcaagaaaaagtctgattacaac
ctcagcaaagccagcgccccgattctcaccaacaccaccctcaacgtcatccggcttgtt
ggaaagtacatgcagatgatgaacattctgaagccgattgcctttgacgtcatccactgt
gtatcgcagctctttgactactacctttatgccgtgtacaccttcttcgggcgcaatgac
atgcccgtcccaagcccatctctgcccacctatagtggcagagaggcagccccagccagg
gtggtgggccctgcctgcttgtatgagtcatcaggtctgggccttatcagcagccgactg
agaacaacactgaaccggatccaggagagtctcattgacatggattctgtcggggagaat
gcaggagtccatggtccaccagaggacaggaaggaaaaggtccccagtcctcacctgagc
cagatggtggttctcacagacagcgcaactctctatgggctggcacagagggtggtggcc
actgagtctcttgtgtttttggccgagcagtttgagtctctgcagttccacttggacaca
atgatgcctgcagccaaaaaaccgttcctacagcagttttattcccagacggtgtccaca
gccagcgaactgcgtaaaccgatatactggatagtggcagcaaaggctatagactacgaa
caaatgctgcttatgatggccggagttaaatgggacatcaaggagataatgtcacagcac
aacatatacgtggatgttctgctgaaggagtttgagcagtttaacaagcggctcagtgat
gtttccagacatgtgcgcattcctctgcctgtgtccaacgtcctctgggagcactgtatc
cgcctggcaaacaggactctggttgaggggtatgctaacgtaaagaaatgcagcaacgag
ggccgagccttgatgcagctggactttcagcagtttctgatgaagctggagaaattgaca
gacctgcggcccatccctgacaaggagtttgtagaaacctacatcaaggcctattacctg
actgaaaatgatatggagcagtttatcaaaaatcacagggagtactccatgaagcagctg
gccaacttggtgaacgtgtgtctgggctcacacataaacaaaagggctcgtcagaaactt
ctagctgccatcgatgatattgacaggcccaagagatag
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