Girardinichthys multiradiatus (darkedged splitfin): 124879046
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Entry
124879046 CDS
T08099
Name
(RefSeq) integrin alpha-11-like isoform X1
KO
K06587
integrin alpha 11
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
gmu04810
Regulation of actin cytoskeleton
gmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124879046
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124879046
09142 Cell motility
04820 Cytoskeleton in muscle cells
124879046
04810 Regulation of actin cytoskeleton
124879046
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124879046
Cell adhesion molecules [BR:
gmu04515
]
Integrins
Integrin alpha subunits
124879046
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
VWA_2
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
124879046
NCBI-ProteinID:
XP_047239272
LinkDB
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Position
2:12306753..12453233
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AA seq
1194 aa
AA seq
DB search
MDYQHIIVLWTCTLWPDLHLCFNFDKKNYKIFHGSIDAQFGYTVQQHEAGGHQWLLVGAP
FEYTGQLQTGDVYKCPLDIKSSANCSRLDLGKLSLDNVTERKDRMGLGMTLTSNSKDNSF
VTCGPLWSHECGSSLYSTGICTKANWNFRLTQTFAPALQRCETFMDIVIVLDGSNSIYPW
YEVQDFIINILQRFYIGPGQTQVGVVQYGSTVVHEFSLGEYQTVEDVLDAARNIDQRGGE
ETRTALGINVARSEAFQRGGRSGAQKVMIVITDGESHDSPQLMEAVSQSKRENITMYAIA
VLGYYNRRGINPETFLKEIKFIASDPDEEHFFKVTDESALKDIVDALGERIFYLEGISSQ
GRGFDLQMAQAGFSSHLVNDGVLLGAVGAYDWNGAVLKKTKHGKVFSPKSSYKDEFPEAL
KNHAAYLGYSVDAVISPDGSQLYIAGAPRFNHTGKVIIFTMKNNGNLTILQALLGQQIGS
YFGSGLLSMDIDEDGQTDFLMVAAPMYYNQGLERGRVYIYSMSLEAIFIFHGVLEVSHHS
QNSRLGSALAQIADMNGDGFKELVVGAPLEDDHQGAIYIFHSKDKMIGPHYKQRLSGAVI
STGLQYFGQSLHGVLDVNGDGLVDLAVGALGAVIIIWSRGVVRIDAKMTFEPEKINIFNK
NCQRGGKEVTCMSVAVCLRVDSRIKTKQDNRNEVAVWYSLVFDEKRFPPWAVMDESHRQQ
PRTLFLHTGNQKCEYLGFFVQDIADYRRPIVVVMEAGLQSQDKGPVLDPDWPTTLRTELP
FWNGCEGDTCIPDLILHSHTDLLNVLQFCSTWKHATYSLCNHQKGDEEKVFVFENGRRKI
TVFAQLENRGENAYRATLNISTTPNLLFSSLLVKEQSDIQIECSTENRTSSLRSCNISAP
FMRSLAQVTFHLELEISRSIFLDFVQLSMVTTSEGKDGYPDDNTNNISLPLKYQADLLFT
RDPNPHRFEIRGSLYSSSEEEPDTAFPAFNLTFNVWNMGIFLVKDIMLKADIWAVTKEGN
QLVAITDYSIEEQGTDSSCMLPHTKTTILGKPEDLTNLSQLNYSNSVSILLQCRLSLSPS
KGLKLTFIGRLQLPALHAVSFRSLELLTVASIQLEKSNPMFLQEDNLVIQTILDLRKEGH
NSIPIWIILGSSLGGLLLLCLIIFGLWKLGFFKTQRREEEEEQPVTNGKAEKQL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggattatcaacacattattgtgctgtggacatgcaccctctggccagatcttcacctc
tgcttcaactttgacaagaagaactataagatcttccatggctctatagatgctcagttt
ggatacacagtccagcagcacgaggcaggaggacaccaatggttgctcgttggtgctccc
tttgaatacacaggacagcttcaaactggtgatgtatataaatgtccactggatatcaaa
agttctgcaaactgcagccgtcttgacctgggcaaactttctctggacaatgtgacagaa
aggaaggacaggatgggactaggaatgacactgacctccaactccaaagataacagcttt
gtgacttgtggtcctctctggtctcatgaatgtggaagttctctgtacagcactggaatc
tgcactaaagccaactggaacttcagactcacccagacctttgcacctgctctacagagg
tgtgaaacatttatggacattgttatcgttctggatggttccaattctatttacccctgg
tatgaggtgcaggactttatcataaacatcttgcagaggttctacattggcccaggtcaa
acacaggtaggagttgttcagtatggctccacagtagtccatgagttcagtttaggtgaa
taccaaacagtggaggatgtgctagatgctgccagaaacattgaccaacgaggtggagag
gaaacgaggacagcactggggatcaatgtggcacgatcggaggcattccagcgtggcggc
aggtcaggagcacagaaggtgatgattgtgatcacagatggtgaatcacatgacagtcct
cagctgatggaagctgtcagtcaaagcaagagagaaaacatcaccatgtatgctattgct
gttctaggttattacaaccgccgtggaataaacccagagacctttcttaaagaaatcaag
tttattgcaagcgaccctgatgaggagcacttcttcaaagtcaccgatgagtcagcactg
aaggacattgtggatgctcttggagaaagaattttctatctggaaggcattagcagtcag
ggtcgggggtttgatctgcagatggctcaagctggtttctcttcacatttagtcaatgat
ggtgttctgcttggagcagtaggtgcttatgactggaatggtgctgtgctaaaaaaaact
aaacatggtaaagttttttcaccaaaatcctcctacaaagacgagtttccagaagccctg
aagaaccatgctgcttatttgggatattctgtggatgcagttatttcacctgatggctct
cagctttatatagctggagctccaaggttcaaccacactggcaaggtcatcattttcacc
atgaagaacaatggaaacctcactatcctgcaggcacttctgggacagcagattggttca
tattttggcagtggactgttatcaatggacattgacgaagatggccaaactgactttctt
atggttgcagcacccatgtattacaatcaaggcttggagagaggaagggtttatatatac
tccatgtcactggaggcaatcttcatcttccatggagtgcttgaagtgtcccatcattct
caaaactctcgtctgggttcagcactggcacaaatagctgacatgaatggagatggattt
aaggagcttgtggtgggagctcccctagaggatgaccatcagggggcaatctacatcttt
catagcaaagacaagatgataggaccacactacaaacagcgcctgtctggagctgttatt
tcaacaggtttgcagtattttggtcagagtcttcatggagttcttgacgtcaatggcgat
ggtcttgttgatttagcagtgggagcactaggagctgttatcattatctggtcccggggc
gtagtgcggattgatgccaaaatgacttttgaaccggagaagatcaacatctttaacaag
aactgtcagcgaggtgggaaggaggtcacttgcatgtcagttgctgtctgtctgagggta
gacagcaggataaaaaccaagcaagataacagaaatgaagttgctgtttggtacagtctg
gtttttgatgagaagcgttttcccccctgggcagtcatggatgaatcacatcgacagcag
cccagaactctttttttacacactgggaatcagaaatgtgaataccttggcttttttgtg
caggacatagcagattacaggcggcctatagtggttgttatggaggcaggacttcagagc
caggacaaggggccagtgttggatccagactggccgacaaccctaagaactgagcttccg
ttctggaatggatgtgagggggatacctgcattcctgaccttatactccacagtcacact
gaccttttaaatgttctgcagttctgcagcacatggaaacatgccacctactcactctgc
aaccatcaaaagggagatgaagagaaagtgtttgtttttgagaatgggcggaggaaaatt
actgtgtttgctcagctagaaaaccggggagagaatgcatacagagctacactcaacatc
tccactacccctaacctacttttctccagtctcttagtcaaggaacaatcggatatccaa
attgaatgttccactgagaacagaacatcctccctgaggagctgtaacatcagtgctcca
ttcatgaggtcactggcccaggtaaccttccatctggagttggagatcagccgttctatc
tttcttgattttgtacaactcagcatggtaactactagtgagggaaaggatggataccca
gatgacaacaccaataacatcagcctcccattaaaatatcaagctgaccttctcttcacc
agagaccccaatcctcatcgttttgagatcagaggtagcctttactcttcgtccgaagaa
gaaccagatacagccttccctgccttcaacctcacctttaatgtttggaatatgggcatc
ttcttagtaaaggacatcatgttaaaagctgatatctgggctgtaaccaaggagggcaat
cagctggtggccattactgactacagcattgaagagcagggaacagattccagctgcatg
ctacctcataccaaaacaaccattctaggtaaaccagaggacctaactaatctctctcag
ctgaactacagtaacagtgtgagtatactgctccagtgcagactcagcctgtcaccatcc
aaggggctgaagctcacattcataggaagacttcagctacctgctctgcatgctgtgagt
ttcaggtccttagagctgctgactgttgcctcaatccagcttgagaagtccaatccaatg
tttcttcaagaagacaaccttgttatacagaccatcctggatctgagaaaggagggacac
aactccatccctatctggattatcctgggaagctcactgggaggcctgttgctgctttgc
ttaatcatctttggcttatggaagcttggattcttcaaaacacaaagacgtgaggaagaa
gaggagcagcctgtaaccaatgggaaggcagagaagcagctataa
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