Girardinichthys multiradiatus (darkedged splitfin): 124879055
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Entry
124879055 CDS
T08099
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmu01009
]
124879055 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmu03021
]
124879055 (sfpq)
03041 Spliceosome [BR:
gmu03041
]
124879055 (sfpq)
Protein phosphatases and associated proteins [BR:
gmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124879055 (sfpq)
Transcription machinery [BR:
gmu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124879055 (sfpq)
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124879055 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
124879055
NCBI-ProteinID:
XP_047239281
LinkDB
All DBs
Position
13:complement(41755035..41784887)
Genome browser
AA seq
696 aa
AA seq
DB search
MSRFNNNRGGFGMNHYQPRRGGGPGGPMRGSLMGNPHYRNHPFQNSHQNRRGGNNFITSQ
NNNVPQKSEVKQSTPIIPPPSPGPALTMKGPMQQEQQKPSAQQEQQKPSAQQAPQKPNPS
VDQPKTQTSPQTPEVSSAQPNIQANQNQQIKSPAGNANAQQHKQQPLQQSPRPSPQQGQK
PAPPQSPKPIPQQSPKPNPQQNQKPGPQQNLRPGPQQNQKPSPPQGPRPGQQKGQRSGPQ
QGPKTGHPQGHGLAPKPAQRAEPMEDGSKSGPANPGMSQETTFKAALSMLLKPGEKSYTQ
RCRLFVGNLPNDITEEDFRKLFAKYGEPSEVFINKAKGFGFIRLESRALAEIAKAEMDDH
PMKGRPLRVRFATHSAALSVKNLSPYVSNELLDEAFSQFGMVERAVVVVDDRGRSAGRGI
VEFASRAAAKKALDRCNEGVFLLTSSPRPVVVEPLEQFDCDDGLPEKFAQKNPKFQAARE
QPPRFARPGSFEFEYSKRWKSMDEMEKQQREQVEKNMREAREKLESEMEDAYHEHQANML
RQELLRRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMLRKREMEEQMRRQREEN
YRMGNFMDRDIDIRMHTSGSMGIGEMSFSGSSQNFSMSGLGFESQSGLGSSPGGLMGGEM
RNERFAQGGARGIGAGTSGYGRVREEFDGPLKKPRF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtttcaacaataaccgcggtgggttcgggatgaatcactaccagccacgccga
ggcggaggtcccggtggtccaatgcgtggcagcttaatgggaaacccgcattaccgtaac
caccctttccaaaactcccaccagaaccggaggggaggcaacaacttcatcacgtcccaa
aacaacaatgtcccacagaagtccgaagttaagcagtcgacgccgattattcctccaccg
agtccaggaccggccctcaccatgaaaggcccgatgcagcaggagcagcagaagccctcg
gcccagcaggagcagcagaagccctcggcccagcaggcgccgcagaaaccgaatccctct
gtggaccagccgaagacccagacctcacctcaaacacccgaggtatcctccgctcagccc
aatatccaggccaaccagaaccagcagatcaagtctccggcagggaacgctaacgcacag
caacataagcagcagcctcttcagcaaagcccgaggccgagtccccagcaaggccagaaa
cccgcaccgccacagagcccgaagccgattccacagcagagcccgaaacccaacccccaa
cagaaccagaagcccggtccacagcagaacctgaggcctggtccccagcagaaccagaag
cccagtccaccacagggcccgagaccaggccaacagaagggccaacggtctggtcctcaa
caaggcccgaagactggccatccacagggccatggcctggctcctaagccggcccagagg
gcagaaccgatggaggatggcagtaaaagcggcccagcgaacccgggaatgagccaggaa
acgacattcaaagcggccttgtccatgttgttgaagcccggagaaaagtcatacacacag
agatgccgtttgtttgttggtaacctgccaaatgacatcacagaggaggatttcaggaag
ctctttgctaagtacggagaaccttctgaagtcttcatcaacaaagcaaaaggctttgga
tttatccgactggagtccagggcacttgcagaaatagctaaggctgagatggatgaccat
ccaatgaaaggcagaccactgcgtgttcgatttgctacacactctgcagccctgtctgtg
aagaatctgtcaccgtatgtttccaacgagctcctggatgaagcgttctcgcagtttggc
atggtcgagagggccgttgtcgttgttgatgaccgcggtcggtctgcagggcgcgggatt
gtcgagttcgcttccagggcagctgccaaaaaggctctggaccggtgcaacgagggtgtt
ttccttcttacctcgtcaccccgtcctgtagttgttgagcctctggagcagtttgattgt
gatgatggtcttccagagaaatttgctcagaagaacccaaaatttcaagctgcgcgcgag
cagcctccccgttttgctcgccctggctcctttgagtttgagtattcaaaacgttggaag
tctatggatgaaatggagaagcagcagagggagcaggtggagaagaacatgcgcgaggcc
cgcgaaaaactggagagtgagatggaagatgcttatcatgagcatcaggccaatatgcta
cgtcaggaacttctgaggcggcaggaagagctaaggcgcatggaggaactgcacaaccaa
gaaatgcaaaagagaaaggaaatgcagctcagacaggaagaagaacgacgcagacgggaa
gaagagatgcttcgaaagagggaaatggaggaacagatgcgccgtcagcgtgaagaaaac
tacagaatgggaaatttcatggacagagacattgacataagaatgcacaccagtggctct
atgggcataggggagatgtccttcagtgggtccagccagaacttctcaatgagtggactt
ggctttgagagtcagtctggattgggatcatcaccaggaggcctgatgggcggtgaaatg
cgcaatgagcgctttgcccagggtggtgctagaggaatcggagcgggtacctcagggtat
ggccgcgtccgtgaagagtttgatggcccccttaagaaaccccgtttttaa
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