KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124879073
Entry
124879073         CDS       T08099                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    124879073 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmu03019]
    124879073 (wdr61)
Messenger RNA biogenesis [BR:gmu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     124879073 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_SCAP Beta-prop_ACSF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_VPS8 eIF2A Beta-prop_WDR41 Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_HPS5 Tricorn_2nd NBCH_WD40 Beta-prop_SPT8 PROPPIN Ge1_WD40 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Cytochrom_D1 WD40_like WDR54 WD_LRWD1 VPS8_N Beta-prop_IFT122_2nd Nucleoporin_N DUF2415 Beta-prop_pof12
Other DBs
NCBI-GeneID: 124879073
NCBI-ProteinID: XP_047239335
LinkDB
Position
2:complement(13734747..13745989)
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSEADGSETIITGSLDDMVKVWKWSDEKMELQWTL
EGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKY
IATGSHLGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDHTHFVSSSSDKSVKVWDASSRACINTFFDHQDQVWCVKYNSNGSKIVSAGDDRAIHI
YDCPL
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtacacagtacagcattctgttcaagcaagaacatgctcatgacgatgccatttgg
acagcggcatggggcaaaagtgaagcagatggctcagaaaccatcatcaccggttcactg
gatgatatggtcaaagtctggaaatggtcagatgagaagatggagctgcagtggactctg
gagggccaccagctgggagtggtgtctgtagacatcagccacaacggagccatcgctgcc
tccagttccctcgacgcacacatccgtctgtgggacctggaatcaggaaaacagatcaag
tccatggatgctggaccagttgacgcgtggacggttgccttctctccagactctaaatac
atcgccacaggaagccatcttggcaaagtgaacatctttggtgtagaaagtggcaagaag
gaatattccctggacactcgaggaaaattcatcctgagcatagcttatagccccgatggg
aagtatttagccagcggagctattgatgggatcatcaacatctttgacattgccactgga
aagctactccacacacttgaaggtcacgccatgcccatcagatccctcaccttctccccg
gactcccagctgctggtcacagcctccgatgacggatacatcaaaatatacgatgtacaa
catgccaaccttgccggcacgctgagcggtcatggatcctgggttcttaatgttgcgttt
tctccggatcacacccactttgtctcgagctcatctgacaagagcgtgaaagtttgggac
gccagctccagagcttgtatcaacactttcttcgaccatcaagaccaggtgtggtgcgtg
aagtacaacagcaacggctcaaagatcgtctcggccggtgacgaccgcgccatccacatc
tacgactgcccgttatga

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