Girardinichthys multiradiatus (darkedged splitfin): 124879111
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Entry
124879111 CDS
T08099
Symbol
tdp2b
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 2
KO
K19619
tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124879111 (tdp2b)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
124879111 (tdp2b)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
UBA_4
Exo_endo_phos
Exo_endo_phos2
UBA_8
TAP_C
Motif
Other DBs
NCBI-GeneID:
124879111
NCBI-ProteinID:
XP_047239396
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All DBs
Position
13:complement(24331880..24341521)
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AA seq
359 aa
AA seq
DB search
MASTSNCDTPSVSDVEKSRSGLCEEFAGITGTDSAVAQCYLAENDWKMERALNSFFEADM
ERVFEEDFEESDSSPQKKRQKVEKDPPKECIDLTGDSPAAQRPSDEDDGKLSLISWNVDG
LDTDNLAERARGLCSYLVLYTPDVVFLQELIPPYVQYLRKRAVSYLIIEGGEDAYFTGMM
LKKSRVKFLESEIVTYPTTQMMRNLLVAQVTFKGQRLCLMTSHLESCKGHSQERMKQLQT
VMQRMKDAHDEVTVLFGGDTNLRDTEVAKVGLPSSVCDVWERLGKQEHCRYTWDTKANNN
KTVPFVSRCRFDRIYLRPASKEGVPCLAPDHMALIGLEKLDCGRYTSDHWGIYCSFTAG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacgtcaaactgtgacacaccgtctgtctccgacgtggaaaaaagcaggagt
ggactttgcgaggagtttgctgggataacgggaactgacagcgccgtggctcaatgttac
ctggctgaaaatgactggaagatggagcgagctttaaactcattctttgaggcagacatg
gagagagtatttgaggaagactttgaggagagtgacagcagccctcaaaaaaagaggcaa
aaggtcgagaaagatcctccaaaggagtgcatcgatttgaccggagacagtccagctgca
caaagaccatcagatgaagatgacggcaaactgtcgctgatctcctggaatgtggatgga
cttgacacagacaatctggcagagcgtgccagaggcctctgttcctatttagtcttatac
acccctgatgtggtattcctgcaggaactcattccaccttatgttcaatacttgaggaaa
cgggctgtcagctacctcatcattgaaggtggtgaagatgcttacttcacagggatgatg
ctaaagaaatctcgagttaagttcttggagagtgagatagtaacctatcctaccactcag
atgatgaggaatctacttgtagctcaggtgacgttcaaaggtcagaggttgtgcctgatg
acttcccaccttgaaagctgcaaaggccactctcaggagcggatgaaacagctgcagacg
gtgatgcagaggatgaaggatgctcatgatgaagtcaccgtcctgtttggaggggacaca
aatctgagagacacggaggtagccaaagtaggcctaccttctagcgtctgtgacgtgtgg
gagcgactgggcaagcaggagcactgccgctacacatgggacaccaaagccaacaacaac
aagaccgttcccttcgtcagccgctgccgcttcgaccgcatctacctccggccagcttcc
aaggaaggagtcccatgtctggccccggaccacatggccctaattggactggagaagctg
gactgtggtcgctacacgagtgatcactggggaatttactgcagcttcactgcagggtag
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