Girardinichthys multiradiatus (darkedged splitfin): 124879171
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Entry
124879171 CDS
T08099
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124879171 (tdrd12)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
124879171 (tdrd12)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124879171 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
124879171
NCBI-ProteinID:
XP_047239525
LinkDB
All DBs
Position
2:complement(13106766..13247567)
Genome browser
AA seq
1356 aa
AA seq
DB search
MLKISILKVESPSCLWGRVVCSNEETMEHYINLQAQMNLFYHDLTQDLQRLKPKSLEEGQ
VYVVFWAVKRSWCRAVVESIITDPSCCRVICFLVDHGEMIVVSSDKIRVLVQKFLQLPFW
VRKFHLARIKPTTLRVSLFVEKAELEPSSQWDCSATLYLHNLLQASTQTEAVIHDLESES
TAIELYLTISNIKICVNDDLVANRFAYYSSSGLEACDRFPLMMSSNILTQTISKSFDHHT
EQNLHSSSQHRGSSESPDTSEVGDWLPQSRLLELVTCEEGSRSEATKELTSFKNQSKYGP
NVSGAERFLKFLNPGTGNQLVLSNMGQKAELKNCQPEVTILSESCTDQELHATSMLSETN
DLNKTVDCRHKTELRRSEEDRVCSRLLEWLNPEPFTSDSNTGDEVPLLSDPWVKGILCHS
AISVEPCKTLEDAPITDSLRQVLNRKNYHTLFPSDRYSWPAVARGCNTLIISQNADEPLG
YLIPLLTHILLNSILLSQLSSSGPIAVLLCPGWEKAQVVYDLLEDSKVSRSLHPVIVLVG
TGKDEVKAVKIPKNCLVLVTTPFTFVRLLSCHCFLFLRLHHLLLDEADQLFTLAPDQMAT
ILQHFQKVSASEEKTSCPRQLVAAAKKWTSPMEDLISCHMPNPSIVITVPEEAALYGNIQ
QVILMTFESNKISVLLGALDFSPDVGQKTLIVANSVQEVEDVFKAVRNKSAFCLKTHEGL
LDKLDFVIQQWKKNIGPGTHVILVSTSECLKFLGIRDATCVVHYGFPSSPKQFGSRLFCM
AKNFRNLSEQDQTDGCSLVTRSVLLISEENARHVVGILRYLERTDAPLPPVLLTFAEGVH
VAREDLKTNRPFCSYLKSFGMCRDRSVCPDRHRFNPQLDQSAFPAAGVIEVLPLYIKTAS
VYYGRLVRQNHEEFESMASEMFSYYADKKPGAKELLEGALYAVQEEGIFHRVKILSLPDR
GESLFYNVLVQFIDIGKEVDVKSHQILELPEQFHSLPYQAIEMVVCRVKPVDAEIEWHPK
VTRAISQKIRGLQHRARVVLGLGNTVFVDPMVRVTQMPGTKTLINEYNVQSEILKTGMGV
SNPEHLDFMRGLGQDSVVKCCTYGGHTSRMMDSSLSEEHTLAMAFRVAEVKKVAALDPSH
QQAPAGPEVPLLSVRNQKSHLDSDIDFKQKNVNLVEKIKSIENGREIYKSNPAASLSLHE
NGMPDGDEQVVSSDGKVSKNLSKSLYPHIIWYQTCDSLIVTVKLMNPESQRCDFYTDRVV
YSGRVNGRSYKADLELHQNIAADSCHWEMKSNQPVLKLVKQQLGYWQRLIRSKNIFVSYD
MEHVDEEEDKSSCLWFVENTGEENCYVNMESGSESD
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaatatcaattttgaaggtggagagtccatcttgcctctggggtcgggttgtt
tgcagcaatgaggagaccatggaacattacattaatctccaggctcagatgaaccttttc
taccatgatctcactcaagacctacagcgactgaaacctaagtcattagaggaaggacag
gtttatgtggtattctgggccgtaaagaggtcctggtgccgtgctgtggtggagtccatc
atcacagacccgtcatgctgtcgggttatctgtttcctagttgaccacggagaaatgatt
gtggtctcctcagacaagataagagtattagtacagaagttccttcaacttcctttctgg
gtgaggaagttccatttggcaagaatcaaaccaacaactctgcgagtatctctatttgta
gaaaaagcagaacttgagccttcgagtcagtgggactgctctgctacactatacctgcac
aacttgcttcaagcatccacccaaacagaagctgtgattcatgacttagagtcagagtct
actgccattgagctctatctgaccatcagcaacatcaagatctgtgtgaacgatgacctg
gtggctaataggtttgcatattacagcagcagtggcctggaggcatgtgacagatttcct
ctcatgatgtcctccaacatcttaactcagaccatttccaaatcgtttgaccaccacact
gagcagaatctacattcttctagtcaacatcgagggtcatcagaaagtcctgatacttca
gaagtaggggattggctgcctcagagccgactccttgaactggttacttgtgaagaaggc
agcaggtcagaggccacaaaagaactaacttcttttaaaaaccaatctaagtatggccca
aacgtttctggagcagagaggttcttgaagtttttgaatcctggcacaggcaatcaattg
gtgctgtcaaacatgggtcagaaggctgagcttaagaactgtcaacctgaggtgactata
ctctctgaatcttgcacggatcaagagctgcatgctactagcatgttgtcagaaaccaat
gatttgaataaaacagtggactgcagacacaaaacagaactgcggaggagtgaagaggac
agggtctgttcacgccttttagagtggctgaacccagagccttttacctctgactcaaac
acaggagatgaggtgcctttactcagcgatccctgggttaagggtattctatgtcattca
gccatttcagtggaaccatgcaaaactttggaggatgctcccatcacagattctctacgt
caggtcttgaatcggaaaaactaccacactctttttccatctgaccgctacagttggcca
gctgtggcgcgtggatgcaatactttaattatttcccagaatgctgacgagccacttggc
taccttatccctctcctcacccacatacttttgaattccatcctcttatcccagctctct
agctcagggcccatagcagtgctgctgtgtccaggctgggagaaggctcaggtggtatac
gacctactggaggacagcaaggtttctcgcagcctccacccagttattgtcctggtgggc
actgggaaagatgaagtcaaggctgtaaaaatccccaaaaactgcctggttttagtgacc
acccctttcactttcgtgcgtctgctgtcttgtcactgctttcttttcctgcggctgcat
catctgctattagatgaggctgaccagctcttcactcttgcacctgatcagatggcaacc
atcttacaacattttcagaaggtgagtgccagtgaagagaagacatcctgtcctcggcag
ctggttgctgcagccaaaaaatggactagtcccatggaagatctaatctcttgtcatatg
ccaaacccctcaattgtcataactgtccctgaggaagctgcgctctatggtaacattcag
caggttatcctaatgacctttgagagcaacaagatatcagtactgctgggagcgttggat
ttcagtcctgatgttggccagaagacactgattgttgcgaactctgttcaggaggttgaa
gatgtgtttaaggctgtcaggaacaaatcagcattctgtctcaagacccatgagggatta
ctggacaaacttgactttgtcatccagcagtggaagaaaaacattggtcctggcactcat
gttattctagtgagcaccagtgagtgtttgaagttccttggcatcagagatgcaacttgt
gttgtccactatggatttccatcttctcccaaacagtttggcagcagactcttctgcatg
gctaagaacttcagaaacctatctgaacaagatcaaacagatggttgttctctggtcacc
aggtcagtgctactgatctcagaagaaaatgctcgccatgttgtgggaattctccgttac
ctggaacgaactgatgcaccactccctcctgtgctactgacttttgctgagggtgtacat
gtggcccgtgaagacctgaagaccaatcgacctttctgtagctatctgaagagctttgga
atgtgcagggacagaagtgtgtgtcctgatcggcacaggttcaaccctcagttggatcag
tcagcattccctgccgctggagtcattgaagttttgcctctctacattaagacggcatct
gtctattatggtcgcttggtcagacagaatcacgaagaatttgaatcaatggcctctgag
atgttctcttattatgctgacaagaaacctggagccaaggagctgctggaaggagcttta
tatgcggtgcaagaggaggggatcttccacagggttaagatcctttcgttacctgaccgt
ggtgagagcctgttttacaatgtcttggttcagttcattgatattggaaaggaggttgac
gtcaaatcccatcagatccttgaactaccagaacagtttcattctctaccttaccaagcc
attgagatggtggtctgccgggtgaagccagttgatgctgagattgagtggcatccaaag
gtcacaagagctatcagccagaagatccgaggtctgcagcatcgagccagagttgtcctg
ggcctaggaaacacagtttttgtcgatcctatggtgcgggttactcagatgccgggtaca
aaaactctcatcaacgagtacaatgtccagtctgagatccttaagacagggatgggagtg
agcaacccagagcatctagacttcatgagaggattgggtcaagatagtgtagtcaagtgc
tgcacatatggaggtcacacatcaagaatgatggatagttcgctgtcagaggaacacaca
ctggctatggctttcagagttgctgaggtcaagaaagttgctgctttagatccttctcat
cagcaggcgccagcaggacctgaagtccccctgctctcagttcgcaatcagaaatcccat
ttggacagtgacattgacttcaaacagaaaaacgtgaatcttgttgagaagattaaaagc
atcgaaaacggaagagaaatttacaaaagtaatcctgctgcctctttgagccttcatgaa
aatggcatgcctgatggagatgagcaggttgtatccagtgatggaaaagtcagcaaaaat
ctttctaagagtttataccctcacatcatttggtaccagacctgtgactctttaattgta
acagtgaagttgatgaacccagagagtcaacgctgtgatttctacactgacagagttgtt
tacagtggcagagtgaacggtcgatcttacaaggctgacctggagcttcaccagaacata
gcagctgactcttgccactgggaaatgaagtccaatcagcctgttcttaaactggtaaaa
cagcagctaggatactggcagagactcatcagaagtaagaatatttttgtgagttatgac
atggaacatgttgatgaagaggaagacaaatcaagttgtctgtggtttgtggagaataca
ggagaggaaaactgttacgtgaacatggagagtggcagcgagagtgactga
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integrated database retrieval system
