Girardinichthys multiradiatus (darkedged splitfin): 124879174
Help
Entry
124879174 CDS
T08099
Symbol
yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124879174 (yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gmu01007
]
124879174 (yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124879174 (yars1)
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124879174 (yars1)
Enzymes [BR:
gmu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
124879174 (yars1)
Amino acid related enzymes [BR:
gmu01007
]
Aminoacyl-tRNA synthetase
Class I (A)
124879174 (yars1)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124879174 (yars1)
Prokaryotic type
124879174 (yars1)
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
124879174 (yars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
124879174
NCBI-ProteinID:
XP_047239536
LinkDB
All DBs
Position
13:14213536..14220026
Genome browser
AA seq
528 aa
AA seq
DB search
MADQLSPEEKFTLITRNLQEVLGEEKLKQVLQERELKVYWGTATTGKPHVAYFVPMSKIA
DFLKAGCEVTVLFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLQKLRFIKG
TDFQLSREYTLDVYRLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLQVD
AQFGGVDQRKIFTLAEKYLPSLGYAKRAHLMNPMVPGLTGAKMSSSEEESKIDLLDSKED
VKKKLKKAFCEPRNIQNNGVLSFVKHVLFPLRGEFCIKRDPKWGGDKVYTGFEEVEKEFA
EEMIHPGDLKASVEAALNQLLDPIRKKFESPELRKLTNSAYPDPSKTKAGGKGAKTGGED
GELVPSRLDIRVGKVISVEKHPDADSLYLEKIDVGEPEPRTVVSGLVAYVSQEDLQDRMV
LVLCNLKPQKMRGIESQAMLLCASVEGEPRKVEPLDPPEGSSPGERVFVEGYESEKPDEK
LNPKKKVWEKLQVDLKISDGCVAQWKDKKLLTKLGHITCKTLKGGNIS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcagctcagtcccgaggagaagttcaccctcattaccaggaacctccaggag
gtcctcggtgaggagaagctgaagcaggttcttcaggagagggagctgaaggtgtactgg
gggacggcgaccactggcaaaccgcatgtggcttattttgttcccatgtctaagatagca
gatttcctgaaggccggctgtgaggtaacagttctgtttgcagacctgcacgcttacctt
gacaacatgaaggctccctgggagctgctggagctccgggtgaagtactacgagcaggtg
atcaaggccatgttggagagcatcggcgttcctctgcagaagctgcgtttcatcaaaggc
accgatttccagctcagccgagagtacaccctggatgtgtaccgcctatcctccatggtg
actgaacatgatgctaaaaaggctggagctgaagtggtgaagcaggtcgagcatcctctg
ctgagtggtctgctttatcctggactacaggctttggacgaggagtacctgcaagttgac
gcccagtttggaggagttgaccagaggaagatcttcactctggcagagaagtaccttccc
tccctcggatatgcaaagcgtgcacatctgatgaacccaatggttccaggactgactggg
gctaaaatgagctcctcagaagaagagtcaaagatcgacctactggactccaaagaggat
gtcaaaaagaagctgaagaaggctttctgtgagccacgcaacatccagaacaacggagtt
ctctcttttgttaaacacgtcctctttcctctacgaggagagttctgcatcaaacgggat
ccgaaatgggggggggacaaagtttataccgggtttgaggaagtggaaaaggaatttgct
gaagagatgatccatccaggagacttgaaggcctcagtggaagctgctctaaatcaactc
ctggatccaatcagaaagaagtttgagtctccggagctccgcaagctcaccaactctgct
tatcccgatccatcgaagacaaaagcaggaggaaaaggtgctaaaaccggaggagaagat
ggtgagctggtgccctccaggctggacatcagggtgggcaaggttatcagcgtggagaag
catccggacgctgactcgctgtacctggagaagatcgacgtgggagagccagagccgagg
acggtggtcagcggactggtggcctacgtttcccaggaagaccttcaggacagaatggtg
ttggtcctgtgcaacctaaaaccacagaagatgcgagggatcgagtcccaagccatgctg
ctatgtgcctcagtagaaggtgagccccggaaggtggagcctctcgacccaccagagggt
tcttcgccaggggaacgagtgtttgtggaggggtacgagtcggagaaaccagacgaaaaa
ctgaacccaaagaagaaggtgtgggagaagctgcaggtggacctaaagatctcagacggg
tgtgtggctcagtggaaagataaaaagctgctgaccaaactgggacacatcacatgtaag
acgctgaaaggaggcaacatcagttaa
DBGET
integrated database retrieval system
