Girardinichthys multiradiatus (darkedged splitfin): 124879359
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Entry
124879359 CDS
T08099
Symbol
col28a1a
Name
(RefSeq) collagen, type XXVIII, alpha 1a
KO
K23619
collagen type XXVIII alpha
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmu01002
]
124879359 (col28a1a)
Peptidases and inhibitors [BR:
gmu01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
124879359 (col28a1a)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
124879359
NCBI-ProteinID:
XP_047239838
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Position
13:complement(4228538..4348970)
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AA seq
1176 aa
AA seq
DB search
MDVLELVKICTLTLVLSCPIRCQNIRRKGQRDDNQVIEYKAKSLLCPVEIMFMVDSTERA
KSVRFEQQKEFILRFSIKLMQLHSAGWHVRLRLAALQYSSKVSVEHNFRDWQDLDVFQSR
VASMVFIGHGSYSAYAITNATKVFRQETSSSSLRVALLMTDGSDHPRSPSAVTAAAEAKQ
HNIRVFTIMLSALPQPGAMDTNLRSIASAPPQQHVLSLSDSELDYKLFSEINTVVTTGCP
KLKDCMCERGEKGHIGSPGKPGETGLAGALGPVGSQGEPGHNERPGAEGPQGRPGSKGEK
GKQGKSGDFGAIGEKGIAGLPGLAGPKGEQGARGAPGDPGQEGPPGPQGAGGSRGAPGAP
GENGVGLPGPKGDKGGKGRSGPAGPMGFGVPGTQGPRGPSGIQGPPGFLGEGHVGPKGDR
GYEGPKGSPGPPGLGNKGDKGNTGEPGLPGLIGVPGAGAQGEKGDPGIVGPSGPRGPPGL
LIAGPKGDQGFPGEPGPQGEKGTGEPGPKGETGPDGSLGIPGIPGEDGSVGPKGEMGLPG
LRGPDGAPGTGTSGEKGDRGERGSRGLSGSLGPVGPAGAKGEPGSQGMIGLPGPPGRGYP
GTKGDPGPVGQSGPVGEPGVGIIGPKGNKGSIGPFGPKGAKGDSLTGPQGPPGLPGLQGE
KGPEGKRLPGAKGDRGLPGVPGPSGPPGVGYYGPKGSTGQPGPPGMPGPPGAGLPGPKGE
PGFQGPMGPRGLPGEGLSGKKGNQGSPGERGKNGDTGDFGPPGSPGLMGRPGKKGEAGLT
RDEVIRIIKEIFGCGIMCRGSPLELVFVIDSSERVGPENFEMVKDFVNAIIDQFTVSKEA
SRIGVVLYSHLNSVVVSLHWQPSQDEIKAAIRAMPYLGKGTFTGSAIHQAKQLFQASRPH
VRKVAVVFTDSQSDQRDFLQFKKTATDAHAEGIEVFVIGVVKKTDLLNEEFLSEIKTIGS
DPDEDHVYLIDDFRLLPGLKDNILKQICDQDATTAFPPKCFFSSVETNPNSPEDSDSKMI
LEKENLKQWLPVEPVSPQAPQPTESLWPYENHVDPELTVETSNRQPDLSFISHGDKGKRR
PEQNFDVHPQSPTDWPGEVESTQTTFSPPPPTLAPSRISGKGCSQSLEPGPCRQYTVRWY
YDPEANACAQFWYGGCQGNANNFENEVKCRNTCIYT
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgctggaacttgtgaagatttgcactctcactcttgtgctgtcatgcccaatc
agatgccaaaacataaggaggaaaggtcagagagatgacaaccaggtcatcgaatataaa
gccaaaagcctgctctgcccggtggaaatcatgttcatggtggacagcacagagagagcc
aaatctgtgcggtttgagcagcagaaggagtttatcctacgcttcagcatcaagctcatg
cagctccactctgcaggctggcatgtacgcctgcgcttagctgctttgcagtatagtagt
aaagtttcagtagagcacaacttcagagactggcaggacctagatgtcttccaaagtcgg
gtggcctcaatggtttttattggccatggttcctactcagcctacgctatcaccaatgcc
accaaggtattcaggcaagagacgtcctccagcagtctcagggtggcgctgctgatgaca
gatggaagtgaccacccacgcagccccagtgctgtgacagcagctgcagaggccaaacag
cacaacataagggtgttcaccatcatgctgtctgcactgccccaaccaggtgccatggat
acaaacctgcgatccattgccagcgcccccccacagcagcatgtgctcagtctctctgac
agtgagcttgattacaaactcttcagtgaaataaatacagttgttacgacagggtgccca
aagctaaaggattgtatgtgtgagagaggggagaagggacacattggaagcccagggaaa
ccgggggagacaggattggctggtgccctaggaccagtgggatctcagggcgaacctggt
cataatgagcgtccaggagcagagggccctcaggggaggcctggcagcaaaggtgaaaag
ggcaaacaaggcaaatctggagattttggtgcaataggagaaaagggtatagctggactt
cctggcttggcaggccccaaaggagagcagggagccagaggggcaccaggagacccgggt
caggagggaccacctgggcctcaaggtgcggggggatcaaggggtgcacctggagctcca
ggagaaaatggtgttggcctccctggtccaaagggtgacaaggggggcaaaggaagatca
ggtccagctggaccaatgggttttggtgtgccaggaactcagggtccacgagggccttca
ggaatacaaggtcctccaggatttctaggtgagggtcatgtaggaccaaagggtgacagg
gggtatgagggtcccaaaggcagtcctggacctcctggacttgggaacaaaggtgataag
ggaaacacaggtgaacctgggcttccaggtttgatcggggttccaggtgccggggcacag
ggagaaaagggtgacccaggaattgttggcccttccggtcccagaggacctcctggactg
ctaattgctggaccaaagggtgaccaaggtttccctggagagccaggtcctcaaggagaa
aaaggcacaggtgaaccagggcccaagggtgagacaggaccagatgggtctcttgggatt
cctggcattcctggtgaagatggaagtgttgggcctaagggagagatgggtttgccagga
ctgcgaggcccagatggagcaccaggaacaggcacatctggagaaaagggagatagaggt
gaacgaggttccaggggactctccggctcgctaggcccagttggacctgcaggtgccaag
ggagagcctggcagccaaggaatgatcggcctacctggacctcctgggcgaggctatcca
ggaaccaagggagaccctgggcccgtgggacaatctggacctgttggagagcctggagtg
ggaataattggacccaaaggaaataaaggaagtattggaccttttgggccaaagggggca
aagggagactctttgactggaccacagggtccaccgggtttaccaggactacaaggagaa
aaaggacctgagggaaaaagactaccaggagcaaagggtgacagaggcttaccaggtgtt
ccaggaccatcaggtcctcctggggttggatattatggaccaaagggctctacaggacag
cctggtccaccgggcatgcctgggcctccaggagcaggactaccaggacctaagggagag
cctggatttcaagggccaatgggtccaagagggcttcctggggaaggtctttcaggaaag
aagggtaatcaaggatctcctggagaaagggggaaaaacggagacacaggggactttgga
ccacctggttcccctggacttatggggaggcctgggaaaaaaggagaggcaggacttaca
agagacgaggtcatccggatcataaaggaaatatttggatgtggtatcatgtgcagaggg
agtccactagaacttgtatttgtgattgacagttctgagagagtggggcctgaaaacttt
gagatggtgaaggactttgtgaacgccattattgaccagttcacagtcagcaaagaagcc
agccgtattggtgttgtactctacagccatttgaactcggtggtggtcagtctgcattgg
cagcccagccaggatgagatcaaggctgctataagagccatgccctacctaggcaagggc
acttttaccggcagcgccatccatcaagctaagcagctgttccaagcctctcggccccat
gtgagaaaagtggcagtggttttcacagatagtcagtcagatcagcgggatttcctacag
tttaaaaagacagccacagatgcccatgcagaggggattgaggtgtttgtgataggtgtg
gtcaaaaagactgatcttcttaatgaagagttcctgagtgagataaagactattggctct
gatcctgatgaagatcatgtctaccttattgatgacttccgactgctacctggtctgaag
gataatatactgaagcagatttgtgatcaagatgcaacaacagcatttccaccaaaatgt
tttttttcatctgtggaaaccaatccgaacagtccagaagacagcgactctaaaatgatc
ctagaaaaagaaaacctaaagcaatggcttccagtagaaccagtatccccacaagctcca
cagcccactgagtcactgtggccttatgagaaccatgttgatcctgagttgacggtggag
acctcaaacagacagccagatctatcatttatctctcatggtgacaaggggaagcggagg
ccagagcagaactttgatgttcacccgcagagtcccactgactggccaggtgaggtggaa
agcacccaaacaacttttagccctcctcctccaactctggctccatcacgcatatcaggt
aaggggtgcagccagtctcttgaacctggtccatgtcggcagtacacagtcaggtggtac
tacgacccagaggccaatgcctgtgcccagttttggtatggaggttgtcagggcaacgca
aacaactttgagaatgaagtcaagtgcaggaatacctgtatctacacgtaa
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