Girardinichthys multiradiatus (darkedged splitfin): 124879396
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Entry
124879396 CDS
T08099
Name
(RefSeq) lysine-specific histone demethylase 1B-like isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124879396
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
124879396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
SWIRM
DAO
zf-CW
Thi4
Pyr_redox_2
Pyr_redox
HI0933_like
FAD_binding_3
Pyr_redox_3
FAD_binding_2
FAD_oxidored
Lycopene_cycl
AlaDh_PNT_C
NAD_binding_9
GIDA
MurD-like_N
TrkA_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
124879396
NCBI-ProteinID:
XP_047239898
LinkDB
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Position
13:41991364..41998581
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AA seq
655 aa
AA seq
DB search
MLSDAEKACFLQSSTVPLTPFVIVAADYSGDGSSARRARKRSSGDSPGDGQALRSSGRQS
TARVKRSNNPPPGQSKRKATETEEEDEQAEKKYRKCEKAGCSAMYPVCFASASDRCAKNG
YTSRWYHLSCGEHFCNECFDHYYRSHKDGYETFASWKKVWTSNGKSEPSLKAFMADQQLP
FWVQCTKPDCRKWRQLTKEIQLTYRCGLKVNDIKSEAPDQCSQPEDLRVAEVSDSWWHSM
LILPPLLKESPAGAFLSAYYPDCVGVSPSGSPCDVSMAELRTDPCRAVQPQIPGLCPYFQ
PFYQPNECGKALCVRPDMMELDELYEFPEFSRDPTMYLALRNLILASWHKNCQEVLTAEK
CAQHIVVRGLVRVCCVQELDRVLHFMTRKGLVNTGVLAVKQPLLPEKYCSKKVIIGAGAS
GLAAARQLQNFGTQVVVLEARDRIGGRVWDDTSLGVTVGRGAQIVNGCVNNPIALMCEQV
HLLELTTVCSRLCRIALQFPNRFWDSKIQGADYFGHIPPSPERRGMFSVFYDLDPQGKRA
VLMSIMSGDAVSAVGELEDLEVVDECMKVLRELFKDQEVPDPLNYFVTHWNKDIWSQMSY
SFVKTGGSGEAYDILAEDVQGKVFFAGEATNRHFPQTVTGAYLSGVREASKMAAV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcggacgcagaaaaggcctgttttctgcagagctccactgtccccctgacaccg
tttgttattgtggctgcagattactccggggacgggtccagtgctcgcagagccaggaag
cggagctccggggactccccgggggacggacaggccctgcgctcctccgggaggcagagc
acggcccgggtaaagcgcagcaacaaccctccacctggacagagtaaaagaaaagccaca
gaaacggaggaggaagatgagcaggctgagaagaagtacagaaagtgtgagaaggccgga
tgctcggccatgtatcctgtttgttttgcgagtgcatcagacaggtgtgcaaaaaacgga
tacacatctcgctggtatcacctgtcgtgtggtgaacacttttgcaacgagtgctttgat
cactactatagaagtcacaaggacggctacgagacctttgcttcctggaagaaggtctgg
actagtaacgggaaaagtgagcccagtcttaaagccttcatggccgaccagcagctgcca
ttctgggttcagtgcaccaaaccggactgcaggaagtggcgccagctgaccaaagagatc
cagctcacatatcgctgtgggttgaaggtcaacgacatcaagagtgaggcacctgaccag
tgttcccaaccagaggacctgagggtcgcagaggtgagcgacagctggtggcactccatg
ctgattctaccgccgctgttaaaggaaagcccggccggcgcgtttctctcagcatattat
cctgactgtgtgggggtgagtccgtcagggtctccctgcgacgtgtccatggccgagctc
aggacggacccctgcagagccgtgcagccacagattccaggtctgtgtccatacttccag
ccgttctaccagcctaatgagtgcggcaaggctctgtgtgtgcggcctgacatgatggag
ctggatgagctttacgagtttccagagttttcccgtgatcccaccatgtatctggctcta
aggaaccttatcctggcctcctggcacaagaactgccaggaagtgctaactgctgagaag
tgtgcccagcacatcgttgtccgtgggttggtgcgtgtgtgctgcgtgcaggagctggac
cgggttctccacttcatgaccaggaagggcttggtcaacactggcgtgctggcagtgaaa
cagcctctgctgcctgaaaaatactgctctaagaaggtgatcatcggtgctggtgcctca
ggactggctgctgcccggcagctgcagaacttcggcacacaggtggtggtgcttgaggcc
cgggacagaattggcggacgggtgtgggatgacacatctctaggcgtcactgttggccga
ggcgcccagatcgttaacggttgcgtgaacaaccccatcgctctgatgtgtgaacaggtt
catctgctcgaactgacaacagtctgttcacgcctctgcaggattgctcttcagttcccg
aaccgattctgggactccaagatccaaggtgcagactactttggtcacatcccgccgtct
cctgagaggagagggatgttcagcgtcttctacgacctcgatcctcagggaaaacgagct
gtgctgatgtccatcatgtctggtgatgctgtttctgctgttggggaactggaggacttg
gaggtggtcgatgagtgcatgaaggtcttacgagaacttttcaaagaccaggaggttcca
gatcctctgaattattttgtgactcattggaacaaagacatatggtcccaaatgtcgtac
agctttgtaaagacagggggcagtggagaggcctacgacatcctggctgaagacgtgcag
ggaaaagttttcttcgctggcgaggccacaaaccgacacttccctcagactgtgaccgga
gcctacctcagcggggtcagagaggccagtaagatggctgccgtgtga
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