Girardinichthys multiradiatus (darkedged splitfin): 124879425
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Entry
124879425 CDS
T08099
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71 isoform X1
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124879425 (trim71)
04121 Ubiquitin system [BR:
gmu04121
]
124879425 (trim71)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124879425 (trim71)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124879425 (trim71)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124879425 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
ANCHR-like_BBOX
SGL
zf-RING_5
zf-C3HC4
Ig_GEX2_N
zf-RING_2
Invasin_D3
zf_RING_Vps8_fungal
CEBP_ZZ
Motif
Other DBs
NCBI-GeneID:
124879425
NCBI-ProteinID:
XP_047239948
LinkDB
All DBs
Position
13:13719518..13761195
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AA seq
830 aa
AA seq
DB search
MASFPDSDLQTCPLCKELCGSSAPISSSSSTSSSSSHTSNSSNHATKRLHVLPCLHAFCR
QCLEGQRSPSDPLKLRCPTCDQKVSISEAGVDSLPSSNFLFSNLLDVVVSSEDQIQNKNG
HHHLGGLIGGSSGFHPSHGSLLHTQHMGEPQCSSCDEENPATSHCLDCQEYLCDNCVRAH
HRVRLTKDHFIERLGESLRLSRVNPNSGMGQPRVSVSLAQSLQNNFALLSLFQDRMSFCQ
HHDSEVFLFFCETCSVPICRECSVGRHIGHTFVYLQDAVQDYRAITIQLLADAQQGRQAV
QLSMEKVQAMAEQVEIKAKVVQTEVKALVLRHKKALEERECELLWKVEKIRQVKAKSLYL
QVEKLHQSLTKLDSTIAAVSQILDEGHHLDVLLARERMLTQIHELKSLRSLLQPQEDDRF
MFTPPDQALHIAIQSMGLISSGAFAPVTKAHGEGLKNVLRGKPASFTVIGYDHDGEPRLS
GGDPISAMVMSVADGSLSAVEVTDHQNGSYTVSYLPKTEGEHLVSVLVCNQHIQGSPFKV
TVKSGRSYGSLGSQVSSFGCEGEGDGQLCRPWGISVDKEGYVVVADRSNNRIQIFKSCGA
FHHKFGSLGSRPGQFDRPAGVACDSQRRIIVADKDNHRVQVFTFEGQFLLKFGEKGTKNG
QFNYPWDVAVNSEGKILVSDTRNHRVQLFAPDGSFLNKYGFEGALWKHFDSPRGVAFNHE
DHLVVTDFNNHRLLVIRPDCQSARFLGSEGTGNGQFLRPQGVAVDQENRIIVADSRNHRI
QVFEANGNFLCKFGSQGSGYGQMDRPSGVAVMPDGVIVVVDFGNNRILKF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcttcattcccagattctgacctgcagacgtgtccgctatgtaaggagctgtgcggg
tcctctgctcccatctcctccagctcctctacctcatcctcctcctctcacacctcaaac
tcctctaaccacgccaccaagaggctccacgtcctgccctgcctgcatgccttctgcagg
cagtgtctggaggggcagcgcagccccagtgacccactgaagctgcgatgccccacttgc
gaccagaaggtctccatatctgaggctggggtggattccctaccttcctccaacttcctc
ttcagcaacctattggacgttgtggtgagctcagaagatcagatccagaataaaaacggc
caccatcacctcgggggattgattggaggctcctctggcttccacccttcacatgggagc
ttgctgcacacacagcacatgggagagcctcagtgcagctcctgtgatgaagagaaccca
gccacgtcccattgccttgactgccaggagtatctctgtgacaactgtgtacgagcgcac
caccgggtgcggttgaccaaagaccacttcatcgagcgcctgggtgagagcctccgcctg
agccgggttaaccccaacagcggcatgggtcagcccagggtttccgtgtccctcgcccag
tccttgcagaacaactttgccctgctttccttgttccaggaccgaatgagcttctgccag
caccatgacagcgaggtgtttctgttcttctgtgagacctgctcggtgcccatctgcagg
gagtgcagtgtgggccgtcacataggccacacttttgtctacctgcaagatgctgtgcag
gactacagggccatcaccatccagctgctggcagacgctcagcagggacgacaggctgtt
cagctaagtatggaaaaagtccaagccatggcagagcaggtggagattaaggccaaggtg
gtgcagactgaagtaaaggctctcgtcctgagacacaagaaggcactggaggaaagagag
tgtgagcttctgtggaaggtggagaagatccgtcaagtgaaggccaagtctctgtacctg
caggtggagaaactccaccagagtctaaccaaactggatagtaccattgctgctgtaagc
cagatactcgatgagggccaccacctggatgtgctactggccagggagagaatgctgacc
cagatccatgaactgaagagtctcaggagcctgctgcagccacaagaggacgaccgcttc
atgttcactcctccagaccaggctctgcacatagccatccagtctatgggcctgatcagc
agcggcgccttcgcccctgtcaccaaagcccacggtgaaggtctgaaaaatgtactgcgt
gggaagcctgcgtcctttaccgttattggatacgatcacgatggagagccacgtttgtct
ggcggggatcccatctcagcaatggtgatgtctgttgcagatggctctctgtctgcagtg
gaggtgacggaccaccagaacggctcatacaccgtcagttaccttccgaaaactgagggg
gagcacctggtgtctgtgttggtgtgtaaccaacacatccagggcagccccttcaaggtg
acagtcaagtcaggacggagctatgggtccctcggatcccaggtgtcctccttcggatgt
gagggggagggggacggccagctgtgtcgtccctggggcatcagcgtggacaaggaggga
tatgttgtggtggctgatcgcagcaacaaccgcatacagatcttcaagtcttgcggtgcc
ttccaccataaatttggctctttgggttctcggcctggtcagtttgatcgtccagctggg
gttgcctgtgacagtcagagacgaatcattgtggctgataaggacaatcaccgtgtgcag
gtgtttacattcgagggccagttcctgctgaagtttggggaaaaaggcaccaagaacggg
cagttcaactatccctgggatgtggccgtcaactccgagggtaaaatcttggtctcggac
accagaaaccatcgtgtgcaactttttgcccctgacggctccttcctcaacaaatacggc
tttgaaggggctctgtggaaacactttgattctcccagaggagtagcctttaaccacgaa
gaccaccttgtagtgaccgacttcaacaaccacaggctcctggtcatccggccagactgc
cagtcggcacgctttttgggctcagagggcacagggaatgggcaatttctgcgtccccag
ggtgttgccgtggaccaagagaaccgcatcatcgtggcagactcccgcaaccacagaatc
caagtgttcgaggccaacggaaactttttatgcaaatttggcagtcaggggagcggctat
ggacagatggaccgtccctctggggtagctgtgatgcccgacggtgtcattgtggttgtt
gactttggaaataatcgcattctcaagttctaa
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