Girardinichthys multiradiatus (darkedged splitfin): 124879442
Help
Entry
124879442 CDS
T08099
Symbol
nfatc1
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1 isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04010
MAPK signaling pathway
gmu04020
Calcium signaling pathway
gmu04148
Efferocytosis
gmu04218
Cellular senescence
gmu04310
Wnt signaling pathway
gmu04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124879442 (nfatc1)
04310 Wnt signaling pathway
124879442 (nfatc1)
04020 Calcium signaling pathway
124879442 (nfatc1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124879442 (nfatc1)
09143 Cell growth and death
04218 Cellular senescence
124879442 (nfatc1)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
124879442 (nfatc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124879442 (nfatc1)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
124879442 (nfatc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
124879442
NCBI-ProteinID:
XP_047239983
LinkDB
All DBs
Position
13:42996824..43052165
Genome browser
AA seq
861 aa
AA seq
DB search
MKSAEEDAYGFTPNISLSLPLGNPCLPSQYHGLQSSTTISVSITEPQAFDSQDGMRAAGF
YSTVRPNGAPTLESPRIEITAYGQFPEDEAQESRLPTAKRVNSIGTLSLPSADGYRDPSC
LSPASSVSSRSALSDASYESSFSYNYDNSPQNSPWQSPSVSPKGSTLVLPGDGGASCGSP
RHSPSTSPRTSITDDTWMGPRGSRPNSPCGAKRKYSLNGSEASHKSFPYSPTHSPGLSPH
TSPRLSVTEESWLPNTNQYTNSAILAAINALTTDGVSDLGEGIPIKARKTSLEHSPTVSL
KVEPGGGELRHGDLCQDEPSANRMTLKKEGYCGSFLDVPQHPYTWTKPKQYISPSVPALD
WQLPSSSGPYSLQIEVQPKSHHRAHYETEGSRGAVKALAGGHPVVQLHGYMESEPLTLQL
FIGTADDRLLRPHAFYQVHRITGKTVSTPSHEILHNNTKVLEIPLLPENNMRAIIDCAGI
LKLRNSDIELRKGETDIGRKNTRVRMVFRVHVNQSNGRTMSLQVASNPIECSQRSAQELP
LVDKQSLEKCPAPGGERMILDGHNFQHDSKVVFVEKAQDGHHIWETEAKVERDMLKPNSL
LVEIPPYRTQRLSTPVHVNFYVCNGKRKRSQYQRFAYIPTNVPTIKTEPHDDYDSALVCT
QHGSGRSLHPKPHYPPQVVTPMISDLRPCVVGGAYAVSQQRLAAKPSPVTSSCSPSTSPK
LHDLSLSPFSKCLQQSGHQSPTSHISIIQETPGCFQPPELYPPSSSSSPANSQPSTPTDA
SFSQLPDMTPTQSVSDSTSPGTQELPNPAERGQSSLQEDGSPPTVTVNIKEEPQELDQMY
LDDVNEIIRNDLSSISVHSHV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgcagaagaagatgcatatggcttcacgccgaacatcagcctctccctccca
ctgggcaacccatgcctgccctcccagtaccatggcctccagtccagtaccaccatatcc
gtctccattacagagcctcaagcctttgactcccaggacggcatgagagcagccggcttc
tattcaactgtccgtccaaatggggccccgacccttgagagtccccgcatcgagatcacg
gcctacggtcagtttcctgaggatgaggcacaggagagccgcctacccactgccaagcga
gtaaactccatagggacgctgtccctccccagtgctgatggttaccgtgatcccagctgc
ctgagtccggccagcagcgtctcatcacgcagcgccctctccgacgcctcctacgagtca
agcttctcctacaactatgacaactccccccagaactccccttggcagtccccttccgtg
tccccaaaaggctccaccctggtcctgccgggtgatggcggcgcctcctgtggctcccct
cgtcactccccctccacctccccccgtacaagcataacagacgacacctggatggggcct
cgaggttccaggcccaactctccttgtggagccaagaggaagtacagcctgaatggcagc
gaagcatcacacaagagcttcccatattcacccacccactctccaggcctgtcccctcac
acctccccacggctcagtgtgaccgaggagagctggctgccaaacaccaaccagtacacc
aactcggccatcctggcagccatcaacgcgctcaccacagatggagtgtccgaccttggc
gagggaatccccataaaagctcgaaaaaccagcctagagcacagccccacagtcagcctg
aaggtggagcctggaggtggggagctgcgtcatggagacctatgtcaagatgaaccttct
gcaaaccgaatgaccctcaagaaggaaggctactgtggaagcttcctggatgttcctcag
cacccttacacctggacaaagcccaagcaatatatcagcccatctgtgccggcgctggac
tggcagctgccatcgagctcggggccgtacagcttgcagattgaagtgcagcccaaatct
caccatcgagcccactacgagacggagggcagcaggggagcagtgaaggcactggcagga
gggcacccagttgtccagcttcatggctacatggagagcgaacctctgactctgcagctg
ttcatcggcaccgctgacgacaggctgctgaggccccacgccttctaccaagtccaccgg
atcaccggcaaaacggtgtccacgccgagccatgagatcctgcacaacaacaccaaggtg
ctggagatccccctgctgccggagaacaacatgcgggccataatcgactgtgctggaatc
ctgaagcttcgtaactctgacatcgagctgaggaagggcgagacggacatcggccggaag
aacacgcgtgtgcggatggttttcagagttcacgtcaaccagtcgaacggcagaacaatg
tctctgcaagttgcgtcaaaccctatcgagtgctcccagagatcggcccaggaactgcca
ctggtggacaagcagagcctggagaaatgtcccgcccccggaggggagaggatgatcctc
gatgggcacaacttccagcacgactccaaagtggtgtttgtggaaaaggctcaagatggc
caccacatctgggagactgaggccaaggttgagagagacatgttgaagccaaattcactg
ctggttgaaatccctccgtatcggacccagcgactctccacccctgtccatgttaacttc
tacgtctgcaatggcaagaggaaaaggagtcagtaccagcggttcgcctacatccctacc
aacgtcccaacaataaagacggagccgcatgacgactacgattctgccttggtgtgtacc
caacatggatctggccgctccctgcacccaaagccacattacccccctcaggttgtgacc
ccaatgatctctgacctcaggccttgcgttgtaggaggagcttatgccgttagtcaacaa
agattggcggccaagccttcccctgtgacctcctcctgctctccaagtacaagccccaaa
cttcatgatctgtcgctgtcacccttttccaagtgcctccaacagtcgggccatcagtcc
cccacctctcacatctccattatccaagaaactccaggatgtttccagcctccagagctc
tacccacccagcagttcttcttctcctgcgaactcacagccgtccaccccgactgacgcc
tccttctctcaactccccgacatgactccgacccagtcggtcagtgacagcaccagtccc
ggcacccaggagctccctaacccagcagagagaggtcagtcttctctgcaagaagacggc
agcccaccaactgtgacggtcaacattaaagaagaaccacaagagctggaccagatgtac
ctggatgatgtcaatgagatcatccggaatgacttgtccagcatctccgtccacagccac
gtgtag
DBGET
integrated database retrieval system
