Girardinichthys multiradiatus (darkedged splitfin): 124879477
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Entry
124879477 CDS
T08099
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu02010
ABC transporters
gmu04145
Phagosome
gmu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124879477 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124879477 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124879477 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmu02000
]
124879477 (tap2a)
Enzymes [BR:
gmu01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
124879477 (tap2a)
Transporters [BR:
gmu02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
124879477 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
ABC_ATPase
AAA_29
AAA_30
AAA_16
Rad17
DUF3987
Motif
Other DBs
NCBI-GeneID:
124879477
NCBI-ProteinID:
XP_047240035
LinkDB
All DBs
Position
13:30462089..30479591
Genome browser
AA seq
719 aa
AA seq
DB search
MAEKAVTTIHKVVALIVAVCVDLSLFYASGLVVIHSVLGHFAHLWLSAALRWSAVTGLTL
VFLGDLSPLLIRFITAYSLLPAVLETGTRALYREESQCGPVADICCWLMFAGASLGAALF
WEIIIPDSDEKAENKEQKQKSRVLVMRVLHLYKPDYPKLFGGFVFLSLAVMCEMFIPFYT
GRVIDILGSHYQQTEFLTALFFMGLYSVGSSVSAGCRGGILLCAISSFTCRIKVKLFGAL
TKQEIGFFETVKTGEITSRLSKDTTLTGRTVCLNVNVLLRTFIKTMGMISLMMSLSWKLT
FIVLMETPITGLIQNLYDTRYQRLFQAMQDSMARTNDSANEVVFGIRVVRSFNTEKHEAN
RYNKRLLEIHSLKIRRDTVRAIYLLGRRLTGLGMQVFILYYGRLFIQMGQMTTGNLVSFI
IYQSDLGNSIRTLTYIFGDMLNSVMAAGKVFEYIDRKPQISTDGKLTPDQLEGRISYCGV
NFAYPSNPDKTVLQDFSLELKPGQVTALVGPSGEGKSTCVSLLQRLYEPQEGEILLDYEP
LKSYDHHFFHNKIAVVSQEPVLFSGSIRDNITYGLTDCSMEKIEEAARKANAHDFIKQLE
KGYDTEVGESGGQLSKSERQRIGIARALAREPKIIILDEITSSLDAENENKVLQALASCP
NQTLLVIAHRLKTIEKADQIVVVRGGKVEEKGTHQELMELQGSYHKLRNELFDEANSPQ
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaagccgtaacaacaattcacaaagtcgtcgctttgattgtagcagtttgt
gttgatctgtctttattttacgcatcaggattagttgtaattcacagcgttttggggcat
tttgcgcatctgtggctttctgcagctctacgatggtcagcagtaactggtttaactttg
gtgttcctgggagacctgagtccgctgctgatccggttcataacggcctacagtctgctt
ccagcggtgttggagaccggaaccagggctctttaccgggaggagagccaatgtggaccg
gtggcggatatttgctgctggctgatgttcgccggagcgtcgctgggagctgcgctgttc
tgggagatcatcatccctgacagcgatgaaaaggccgagaataaggagcagaaacagaag
tccagagttctggtcatgagggttctccacctgtacaagccggactatcccaagctgttc
ggaggctttgtgttcctctcattagcagttatgtgtgagatgtttatcccattctacaca
ggcagggtcattgacatccttggaagtcattaccaacaaactgaattcctcacagctctc
ttcttcatgggcctgtactctgttggaagctctgtgagtgctggttgcagagggggtatc
ttactttgtgccatcagttcttttacatgcagaatcaaagtgaagctgtttggtgctttg
accaaacaggagattggattctttgaaaccgtaaagacaggtgaaatcacatccaggttg
tctaaagacaccactctgactggaagaacagtatgtctgaatgttaacgtgctgctgaga
acatttatcaagacgatgggcatgatctccctgatgatgagtctgtcatggaagctcaca
tttattgtgctgatggaaacacctataactggtctcatacagaacttgtatgacactcgc
tatcagaggttgtttcaggcaatgcaggactcgatggctcgaacaaatgactctgctaat
gaagttgtgtttggtattcgtgtggtgcgaagtttcaacacagaaaagcatgaagctaat
cgatacaataaaagattactggaaatacactccctaaagattcgacgggacactgtgagg
gcaatttatctgcttggacgcaggttgacaggtttgggaatgcaggtattcattttatat
tatggcagactcttcatccagatgggacagatgaccactggaaacctggtttccttcatc
atctaccagtcagaccttgggaacagcatccggacactcacatatatatttggtgacatg
ctgaactcagtgatggctgctgggaaagtgtttgagtatatagaccgaaaacctcagatt
agcacagatggaaaactcacaccggatcagctggaaggacgtatcagctactgtggtgtg
aacttcgcctatccttcaaaccctgacaaaactgtgctgcaggacttcagcttggagttg
aaaccaggtcaggtgacagctcttgtgggtccatctggagaaggaaaaagcacctgtgtg
agtctcctacagcgattatatgagcctcaagaaggagaaattttactggattatgaaccg
ctgaaatcctacgaccatcatttcttccacaacaagattgcagtggtgagccaggagcct
gttctcttctctggatccatcagagataacatcacctacggactcactgactgctcaatg
gagaagattgaggaagcagcacgcaaagccaacgcccatgattttattaaacaactggag
aaaggctacgacacagaggtgggggagagtggcggccagttatccaagagtgagaggcag
cggatcggcattgctcgagctctggccagagagccaaaaatcatcattctggatgaaata
accagctctctggatgctgagaatgaaaacaaggttcttcaggccctggcaagctgtccc
aaccagaccctcctggtgattgctcacagactgaagaccatcgagaaggcagatcagatt
gttgtggttagaggaggtaaagtcgaggaaaaggggactcaccaggagctgatggagttg
caggggagctaccataaactgagaaatgagctgtttgacgaggcaaactcaccacagtga
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integrated database retrieval system
