Girardinichthys multiradiatus (darkedged splitfin): 124879516
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Entry
124879516 CDS
T08099
Symbol
nup42
Name
(RefSeq) nucleoporin NUP42
KO
K14321
nucleoporin-like protein 2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124879516 (nup42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124879516 (nup42)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124879516 (nup42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
124879516
NCBI-ProteinID:
XP_047240082
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All DBs
Position
13:complement(18186764..18191122)
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AA seq
430 aa
AA seq
DB search
MVVCNFFLQGRCRYGEKCWNEHPRGGGGGGGGGYNDSYSRSRGQHQQQPRGGGGFGNRVW
VNPSQQRGSYIQPSSFASQGSSDWGSGREGGGGGGGGGGGGGGGGGRRENLKSSDFSFSG
PNRFSALNAPNAFDRGGRGGTAGGGMAGDEDDDKKLEVIQMDMDVWESSGQWGFSCYSYF
KTPISGFTDLSPEELRLEYYSTRASGDLQGYLNGVNQLLSQWKSRVQELKIMNPSTRLAL
LAELNGTGPHSSSSGFGSTTVTGFGSSTSSFGSKGFEAPAPAQPNSFGFPAPGAGFGSSS
ASSPSTGFGSLITAPTQPSSGFGSSSTSSASSFSFAAPSADKPTASLGFGSASGFSFSSA
APNPGGGFGSTFGAVSASPAAGSGMVGEATGGLFSPESKLTQEELNQFKAKRFTLGQIPL
KPPPESMLVL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggtcgtatgtaactttttcctccagggccgctgtcgttacggggagaaatgttggaat
gagcacccgagaggaggaggaggaggaggaggaggaggatataacgacagctacagccgc
tcccgtggtcaacatcagcagcagcccagaggaggaggagggtttgggaacagagtttgg
gtgaatccttcccagcaaagaggaagctatattcagccgtcatccttcgcctcacaggga
agcagtgactggggttctggacgagaaggaggaggaggaggaggaggaggaggaggagga
gggggtggtggtggagggagaagagaaaacttgaagagctccgatttcagtttctcaggc
ccgaatcgattttctgccctcaatgctccgaatgcatttgacaggggaggaagaggagga
acagctggaggaggaatggctggggatgaagacgatgataaaaaacttgaagtcattcag
atggacatggatgtttgggagagttcaggacagtggggcttctcgtgttactcgtacttc
aagacgcccatatctggtttcactgatctctcaccagaggagctcaggctggagtactac
tccaccagagcatcaggagatctgcagggctatctaaacggtgttaatcagctgctcagt
cagtggaaaagcagagtccaggagctgaagattatgaatccgtccacgcgtctggctttg
cttgccgaattaaacggaacaggtccgcattcgtcttcgagtggctttggttccacaacg
gtgaccggatttgggtcctccacatccagcttcggaagcaaaggctttgaggctccagca
ccagcccagcccaacagcttcggtttcccagctccgggtgctggatttggttcttcatct
gcatcttcaccctcaactgggtttggtagccttataactgctccaacacaaccttcatct
gggttcgggtcttcctctacatcttctgcttcatccttctcattcgccgccccgagcgca
gacaagcccacagcctctttaggatttggatcggcctcagggttcagcttctcttccgcg
gcaccaaacccagggggagggttcgggagcactttcggggcagtgagtgcttcacctgca
gctggaagtggcatggttggagaggccacaggcggtctgttctcgcctgagagcaaactt
acgcaggaggaactgaatcagtttaaagccaagaggttcaccttaggacagattccacta
aaacctccacctgaaagcatgctagtgctctga
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