Girardinichthys multiradiatus (darkedged splitfin): 124879526
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Entry
124879526 CDS
T08099
Symbol
cnot3b
Name
(RefSeq) CCR4-NOT transcription complex subunit 3b
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124879526 (cnot3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124879526 (cnot3b)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124879526 (cnot3b)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
124879526 (cnot3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
124879526
NCBI-ProteinID:
XP_047240098
LinkDB
All DBs
Position
13:31087713..31125854
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AA seq
907 aa
AA seq
DB search
MADKRKLQAEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKIVERETKTKAYSKEGLGLIQKVDPAQKE
KEEVGTWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIEELKKFIEKHRYHI
RMLETILRMLDNDSLQVDSIRKIKDDVEYYIDSSQDPDFEENDYIYDDLDLDEFPQQLLA
TSPPGPSHLDDEIFQNSSSTPTSTTSSSPIPPSPATCTTENSEDDKKRGRSTDSEVSQSP
VKNGNPSSSLSSSSSSSSSSSSASGLTSSSLVSVVGGGIGSSGGSHHSTVGGPFSNTSAG
SYSNATQQPPHPSVQQQQAKNSASSSAPISISSTSTNSFSASLASSPPSTQGLLTSNSQP
QSQSGFTAVSNSLDLSLGPSLGKGSISTSSGLSGMPASLSTMVGLLSSSTPAPYAQAAAS
GTGSSGLPGSLGGVNTTTTSSGGAGTIGSSSIAVGGPTSSLGGMLGTSPVLGSVGSGILG
LGSGQSGVQGSSLGSQSPVGSLALGSGIGVIGSNGGSSGSGGSGVGGGSSSLSIRPPSQQ
KQNGSTSHSALVADSTTDSALNSATQSQSSQSSTLTSTANQLKETGPSFLGPMGLSSTSP
SPASYSEAKTTSGGSLQNGPLSYSQSSESIKPQEPLSRSMAERAAPSSGTEGDVSSLHLT
SDIFPSSTTAPSGPPSAPQSSLSEVSILPSLGVCPLGPVPLSKDQLYKQAMQEAAWTHMP
HPSDSERIRQYLMRNPCPTQSFHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYL
AAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWGQRKKEGFTFEYRY
LEDRDLQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaggaaacttcaagcggaaatagatcgatgtctgaaaaaagtagcggag
ggagtggagcagtttgaagatatttggcaaaagcttcataatgcagccaatgcaaaccag
aaggagaaatatgaagcagacctcaagaaagagattaaaaagctccagcgcctacgagac
cagattaagacgtgggtggcatccaacgagatcaaagacaaaaggcagctaatagagaac
cgcaaactcatagaaacgcaaatggagcgctttaaaatagttgaaagagaaaccaagaca
aaagcgtactctaaagaaggacttggcctcatccagaaagtggacccggcgcagaaggag
aaagaagaggtcggcacgtggctaacgaacacgatagacacgttgaacatgcaggtggac
cagtttgagagcgaagtggagtctctttcagtccagacgagaaaaaagaaaggagacaag
gagaagcaggaccggatcgaggaactaaaaaagtttattgagaaacatcggtaccacatc
cgaatgctggagacaatactgagaatgctggacaatgactcgctgcaggtcgactccatc
aggaagatcaaggatgatgttgagtactacatagactcatcgcaagatccagactttgag
gagaatgattatatatacgacgacctcgacctggatgaatttcctcaacaactgctcgcc
acctccccaccaggaccctcgcacttggatgacgagatcttccagaactccagcagcaca
ccgacctccaccacttcttcctcgccaatccctccttcacctgccacttgcactacagag
aactcagaagatgacaagaagaggggacgttcgacagacagtgaagtcagtcagtctcca
gtgaagaatgggaatccctcctcgtcattatcttcttcctcctcttcttcctcttcgtct
tcttccgcctcggggctcacctcatcctcgctggtctctgttgtgggtggaggtattggc
agctctggaggcagtcatcatagcactgtggggggtcctttctccaacacttcagctggc
agctacagcaacgccacgcagcagccacctcacccttcggtgcagcagcagcaggccaaa
aactcggcgagctcttcagctcccatctccatctccagcacctccaccaacagctttagc
gcctccttggcgtcctcaccacccagcacacaggggctcctcacttcaaactcccagccc
cagtcgcagtctggttttacggcagtctccaacagccttgacctcagtttggggccctct
ctgggcaaaggctccatctccaccagctccggcctgtcagggatgccggcatccctgagt
accatggtgggccttctatcaagctccacaccagctccctacgctcaggcggctgcctcg
ggcacaggcagctcaggcttaccgggctctctcggcggcgtcaacaccacaacgaccagc
agtgggggagcgggcaccattggtagcagcagcatcgcagtcggcgggccgacatcctca
ctaggaggcatgcttggcacatcccctgtattgggcagtgtcggatctgggattctgggt
ttgggttcaggtcaatcaggggtgcaggggtcttccttagggtctcagagccccgttgga
agcttggctcttggaagcggaataggagttatcggaagcaatggaggcagctcaggatca
ggaggaagtggagttggaggaggaagctcatccctgtccattcgaccgccgagccaacag
aagcagaatggtagcaccagtcacagtgccctggtagcagatagcacaacagactctgcc
ctcaacagtgccacccaatcccaaagcagccaatcctcaactttgacctccacagccaat
cagcttaaggaaactggtcccagttttcttggccccatgggtttgtcgtccacctccccg
tccccggcttcatacagtgaggctaaaacaacgagcggtggaagccttcagaacgggccg
ctgtcctactcccagtcatccgaaagcatcaagccccaggagcctctgagcaggtccatg
gccgagcgagcagcgcccagctcagggactgagggagatgtgtcctccctgcacctcact
tcagacatcttcccaagcagcactacggccccgtcggggcccccgtcagcacctcagtcc
tccctgtcagaagtcagcatcctcccgtcactgggtgtctgtccactggggccggttccc
ctttccaaagaccagctctacaaacaggccatgcaggaggcggcgtggacgcacatgccc
cacccgtctgactcggagagaatcaggcagtacctcatgaggaacccctgccccacccaa
tctttccaccaccagatgccaccacctcattccgacactgtagagttttaccagaggctt
tccacggaaacgttgttcttcatcttttactacctagagggcactaaggcccagtatctg
gcagccaaggccctgaagaagcagtcgtggaggttccacacaaagtacatgatgtggttt
cagaggcacgaagagcccaagaccatcactgatgagtatgagcagggaacatacatttat
ttcgactatgagaagtggggccagcggaaaaaagagggcttcacatttgagtaccggtac
ctagaggaccgagacctccagtga
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