Girardinichthys multiradiatus (darkedged splitfin): 124879547
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Entry
124879547 CDS
T08099
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03082
ATP-dependent chromatin remodeling
gmu03083
Polycomb repressive complex
gmu04110
Cell cycle
gmu04330
Notch signaling pathway
gmu04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124879547 (hdac1)
03083 Polycomb repressive complex
124879547 (hdac1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124879547 (hdac1)
04350 TGF-beta signaling pathway
124879547 (hdac1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
124879547 (hdac1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmu03036
]
124879547 (hdac1)
Enzymes [BR:
gmu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
124879547 (hdac1)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
124879547 (hdac1)
HDAC complexes
Sin3A-HDAC complex
124879547 (hdac1)
BRAF-HDAC complex
124879547 (hdac1)
REST complex
124879547 (hdac1)
SHIP complex
124879547 (hdac1)
MiDAC complex
124879547 (hdac1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
124879547 (hdac1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
124879547 (hdac1)
Chromatin remodeling factors
NuRD complex
124879547 (hdac1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
124879547
NCBI-ProteinID:
XP_047240129
LinkDB
All DBs
Position
13:complement(11801972..11811935)
Genome browser
AA seq
482 aa
AA seq
DB search
MALSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAS
GEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAG
AVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAI
FKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYIKGFNLPLLMLGG
GGYTIRNVARCWTFETAVALDSSIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLE
KIKQRLFENLRMLPHAPGVQMQAIPEDAPHADSGDEDEEDPDKRISIRAHDKRIACEEEF
SDSEDEAEGQGGGRRNAANHKKAKRVKKEEEKEGEEKKEVKEEEKEEEKMDTSGPKEEIK
TT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtctcaaggaacaaagaaaaaagtttgctattattatgacggcgacgtgggg
aactattactatggccaaggtcatcccatgaaaccccacaggattcgcatgacacacaac
ctcctcctcaactatggactgtacaggaaaatggagatctatagaccacacaaagccagt
ggtgaagagatgacaaagtaccacagcgatgactatataaagttcctgaggtccatccgc
cccgacaacatgtctgagtacagcaaacaaatgcagagattcaatgtcggcgaggactgt
ccagtttttgatggtctatttgagttttgccagctctcaacaggtggctccgtcgccgga
gcggtgaagctgaacaagcagcagacagacatcgccatcaactgggctggtggactccac
cacgccaagaagtctgaggcctctggtttctgctacgtcaacgacatcgtcctggccatt
ctggagctgctgaaataccaccagagggtgctgtacatagacattgacatccaccatggt
gatggagtagaagaggccttctacaccacagacagggtcatgaccgtttctttccacaaa
tacggggagtacttccctggcactggagatctgagggacattggagcaggaaagggaaag
tactacgcagtaaactaccctctaagagacggtattgatgatgaatcctatgaagccatt
tttaaacctatcatggctaaagtgatggagatgtaccagccaagtgctgtggttctgcag
tgtggagcagattctctttctggagacagactgggctgcttcaacctcaccatcaaaggc
catgccaagtgtgtcgagtacataaaaggcttcaacctacctctgctgatgctgggcgga
ggtggctacaccatccgcaacgtagcccgttgctggaccttcgagacggccgtggccctg
gactcctccatccccaacgagttgccctacaacgattacttcgaatactttgggcctgat
ttcaagctgcacatcagcccatccaacatgaccaaccagaacaccaacgagtacctggag
aaaatcaaacaacggctcttcgaaaacctccgcatgctgcctcatgcccccggagtccag
atgcaggcgatccccgaggacgctcctcacgccgacagcggagacgaggatgaggaagac
cccgacaaacgcatctccatccgtgcccatgacaagaggatagcctgtgaggaggagttt
tcagactctgaggacgaggcagaagggcagggaggaggccgcaggaatgcagccaaccac
aaaaaggcaaaaagggtgaagaaggaggaagagaaggaaggagaggaaaagaaagaagtg
aaagaggaagagaaagaagaggagaagatggatacatctggaccaaaagaggagattaag
acaacttga
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integrated database retrieval system
