Girardinichthys multiradiatus (darkedged splitfin): 124879874
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Entry
124879874 CDS
T08099
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124879874 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gmu01007
]
124879874 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124879874 (vars2)
Enzymes [BR:
gmu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
124879874 (vars2)
Amino acid related enzymes [BR:
gmu01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124879874 (vars2)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124879874 (vars2)
Prokaryotic type
124879874 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
DUF6266
Val_tRNA-synt_C
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
124879874
NCBI-ProteinID:
XP_047240633
LinkDB
All DBs
Position
13:complement(6284642..6346286)
Genome browser
AA seq
1083 aa
AA seq
DB search
MWSTSHCPRARLVVKTATKLWSSKPPEPFCPVPSAQLRSQAEKHRRRREREKTILSAQHN
KAEDQKLNWSEKEKIVYTTQTPAGTKKDTTLPLPSSYSPEYVESCWYQWWEKEGFFNPDQ
HERLSHSVDQTFSLCIPPPNVTGTLHLGHALTVAVQDALVRWRRMQGYRVLWVPGCDHAG
IATQTVVERRLLRETGKCRQDFNREEFLQEVWKWKNEKGEEIYHQLRRLGASLDWSRACF
TMDPGFSRAVTEAFVTLCDSDLIYRSENLVNWSCALQSAISDIEVETKDVSGPTMMSVPG
YENKVEFGNMFTFAYTVEGCDSEVPVSTTRPETMLGDVAVAVHPDDPRYQAFHGQWCRHP
FTNRLIPIITDTIVDMELGTGAVKVTPAHDFIDFHLSQRHSLLRPSVIRGDGTMEPLCGQ
WLEGVKRFDARQLVVNALAEKKLFRGKKNHTMILPICSRSGDIIEPLLKKQWFVRCDTMA
LKAIQAVEDGQLEIIPSHYTKTWANWLSSISDWCISRQLWWGHQIPAYQVELPSLTTKEE
ELWVWGKSEKEARQRAAVKYGLNPDDISLRQDPDVLDTWFSSALFPFTMLGWPEKSSDFL
RFYPNSVLETGSDLIFFWVARMVMLGSELTGQLPFRQVLFHSLVRDKYGRKMSKSLGNVI
DPLDVIHGVSLKRLQEKVKEGNLDPREQLVALEAQRKDYPNGIPQCGTDALRFALCSHKI
QGEDISLSLSQVLGCRHFCNKMWQTLRFTLGVLNDNTTPVRTLEETTPLNSMERWICSRL
YSTIVQCEQAFEAYELHIVTSALYSFWVHNLCDVYMEYVKPVLLKQNDRPEVLSNKDHIS
NLKQATISVLYHCTSLSLALLSPFMPFITEELWQRLQPFRPEALAQTSLCLQPYPRSAHL
AHWYFPEEEKDFLLVQDVIRITRSLRAQCGLTKEKPVMWVVCSPSQAQTLLRFGSAVRTL
SRISSLQIYCPDQAGPLPSLHSTPPPTGCFIGVVDNTCQLHLHIQSGIDIDKLIRHLSQR
RDKLLPKLEENLCRLQFPNSLTKTPAQIRQQMESRVSALKKELKSIEDQIKVLQEKQSMD
NCS
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcacaagtcattgcccgagggcaaggctggtagtaaagaccgccactaaactg
tggtccagcaagcctccagaaccattctgtcccgtcccctctgctcagctgcgatcccaa
gctgaaaaacacagacgcaggcgagaacgggagaagactatactgtcagcacaacataat
aaagctgaagatcaaaaattaaactggagtgaaaaagagaagatagtgtatacgactcaa
acgcctgctgggacaaaaaaagatacaaccttgcctttgccatcttcctacagtccagaa
tatgtggagtcttgctggtatcagtggtgggagaaagagggattttttaatcctgatcaa
catgagaggttgtctcatagtgtggatcagacgttttctctatgcattcctccaccaaac
gtgactggcactctgcatctgggccatgctttgactgtagctgtacaggacgctctggtt
cgatggagaaggatgcagggttacagagttctgtgggtccctggatgtgaccatgcaggt
attgcaactcagacagtggtggagaggagacttctgagagaaacagggaagtgcagacaa
gattttaacagagaagaatttttacaggaagtctggaaatggaaaaatgagaaaggggag
gagatttatcaccagctgaggaggcttggtgcttctttggactggagcagagcctgtttc
actatggatccaggttttagcagagctgtaactgaggcttttgtcacattgtgcgattct
gatcttatttatcggtcagaaaatttggtcaactggagctgtgctcttcagtctgcaatc
tcagacatagaggttgagacaaaggacgtgtctgggccaaccatgatgtctgtccctggt
tatgagaataaggtggagtttggaaacatgtttacctttgcatatactgtagaaggttgt
gatagtgaggtgccagtgtccaccactcgtcctgagactatgcttggagatgtggctgta
gctgttcacccagatgatcctcgatatcaggcttttcatggacagtggtgtagacatcct
ttcaccaacagactcatccccattattactgatacaattgtggacatggaactaggaaca
ggagctgtgaaggtgactcctgctcatgacttcatagacttccatctgtcgcagaggcac
tctctgctacgtccttctgtcattagaggagatgggaccatggagccattatgtggacaa
tggctggagggtgtgaagcgatttgatgccaggcagctggttgtgaatgcgcttgctgaa
aagaaactttttagaggaaagaagaaccacaccatgattttacccatctgcagccgctca
ggagacatcattgaaccacttctaaaaaagcagtggtttgtccgctgtgatacaatggct
ttgaaagctatacaggctgtagaggatggacagttggaaatcattccttcccactacacc
aagacgtgggcaaactggctgtccagcatcagtgactggtgcatatccaggcagctttgg
tggggtcatcagatccctgcttatcaagtagagcttcccagcttgacaactaaagaagag
gagctgtgggtttgggggaaaagtgagaaggaggcccgacagagagcagctgtgaaatat
ggattgaacccagatgacatctctttgcgacaggacccagatgttctagatacgtggttc
tcctcagcactgtttcctttcaccatgcttggctggccggaaaagtcctctgacttcctg
cgcttctaccccaactctgttttggagactggcagcgacctcatcttcttttgggttgct
aggatggtgatgttgggatctgaactgactggacaactgccatttagacaggttctattt
cactcgctagtacgagacaagtatggcaggaagatgagtaaatctctgggaaatgtcatt
gaccctttagatgttatacatggagtctccctcaagagacttcaggagaaagtgaaggag
ggaaacctagacccaagagagcagctggttgctctggaagcacagaggaaagactaccct
aatggaatacctcagtgtgggacagatgctctgagattcgctctttgctctcacaagatt
cagggtgaagacattagtttgtccttatctcaagttcttggctgcaggcacttttgtaat
aaaatgtggcagaccctgagattcacattgggagttttgaatgataacacaacaccagtg
agaacacttgaagagacaactcctctaaacagcatggagcggtggatctgttcccgactc
tacagcacaattgtacagtgtgaacaggcatttgaagcttatgagctgcatattgtcaca
tctgccctgtattccttttgggtgcacaacctgtgtgatgtttacatggaatatgtaaag
cctgtcctgttgaagcagaatgacaggccagaggtcctgtctaacaaagaccacataagc
aacttgaagcaggcgaccatctccgttctctatcactgcacgtctttgtctttagctctg
ctctctcccttcatgcccttcatcacagaagaactgtggcagagactccaaccattcaga
cctgaggccttggctcaaaccagcctgtgtttacagccctacccccgatccgctcatctg
gcgcactggtatttccctgaggaggaaaaagattttctgctggtccaggatgttatccga
ataactcgttctctgcgagcccagtgtggcctgactaaagaaaaacctgtcatgtgggta
gtgtgttcaccgagccaggcccagacactccttcgctttggttcagctgttaggacttta
agtcgtatctcaagtctccagatctactgtccggatcaagcaggccctctcccctctctc
cactctactcctccacctacaggatgcttcattggtgtggtggacaacacatgtcagcta
caccttcacatccagagtgggattgacattgacaaactgatccggcatctctctcagcgg
agagataagcttcttccaaagctggaagaaaatctttgcagacttcagtttcccaacagc
ctgaccaagactcctgcacaaatcaggcaacagatggaaagtagggtttcagctttgaag
aaggaactaaagagcattgaggatcagataaaagtgctgcaggagaaacagtcaatggat
aactgtagctga
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