Girardinichthys multiradiatus (darkedged splitfin): 124880306
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Entry
124880306 CDS
T08099
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124880306
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124880306
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gmu00536
]
124880306
Glycosaminoglycan binding proteins [BR:
gmu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124880306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
D8C_UMOD
Motif
Other DBs
NCBI-GeneID:
124880306
NCBI-ProteinID:
XP_047241308
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All DBs
Position
14:18411883..18427891
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AA seq
1961 aa
AA seq
DB search
MCSNCCPSGTECITTNGAVQCLNPCANYTILNDTWRSTDNTDQNFLQCDKSITWNGWYRF
YLGQSSAQIPEKCVAERRCGTHAPLWINGTHPVQFNEIVTRTVCNAWLGSCCRFTSHTIQ
IKLCYGYYVYKLQQPSTCWLAYCAELPLFRASSQNETSITLQWNKVNNNTSFVLQFNGTE
TFISSPDGDGPVTHTVSSLTAGTRYTFTLFSVFENVRSSGVQLPAVTAPQNAEGFRSLRQ
DETSITLQWDPVNNNVSFILRYNGTELNVAAPTGNGPVTLTVPSLTAGSRYTFTLFSVFE
NIRSSGVQLPAVTAPENAEGFRSSEQDETSITLQWNKVNNNTSFVLQFNGTETFISSPDG
DGPVTHTVSSLTAGTRYTFTLFSVFENVRSSGVQLPAVTAPENAEGFRPSSQNETSITLQ
WNKVNNNTSFVLQFNGTETFISSPDGDGPVTHTVSSLIAGTRYTFTLFSVFENVRSSGVQ
LPAVTAPQNAEGFRSLRQDETSITLQWDPVNNNVSFIFRYNGTELNVAAPTGNGPVTLTV
PSLTAGSRYTFTLFSVFENIRSSGVSIAAVTAPENAEGFRASKQDETSITLQWNKVNNNV
SFVLQFNDTETFISSPDGDGPVNHTVSSLTAGTKYTFILYHVFMNVRSSAVNITVATAPL
NAEGFRPSSQDETSITLQWNKVNNNTSFFLQFNGTETFISSPDGDGPVTHTVSSLTAGTR
YTFTLFSVFENVRSSGVQLPAVTAPENAEGFRPSSQNETSITLQWNKVNNNTSFVLQFNG
TETFISSPDGDGPVTHTVSSLTAGSRYTFTLFSVFENVRSSGVQLPAVTAPQNAEGFISL
RQDETSITLQWDPVNNNVSFILRYNGTELNVAAPTGNGPVTLTVPSLTAGSRYTFTLFSV
FENIRSSGVSIAAVTAPENAEGFRASKQDETSITLQWNKVNNNTSFVLQFNDTETLISEP
DGDGPVNYTVSSLTAGTKYTFILYHVFMNVRSSAVNITVATAPLNAEGFRPSSQDETSIT
LQWNKVNNNTSFFLQFNGTETFISSPDGDGPVTHTVSSLIAGTRYTFTLFSVFENVRSSG
VQLPAVTAPQNAEGFRSLRQDETSITLQWDPVNNNVSFILRYNGTELNVAAPTGNGPVTL
TVPSLTAGSRYTFTLFSVFENIRSSGVSIAAVTAPENAEGFRSSKQDETSITLQWNKVNN
NVSFVLQFNDTETLISEPDGDGPVNHTVSSLTAGTKYTFILYHVFMNVRSSAVNITVATA
PLNAEGFRPSSQDETSITLQWNKVNNNTSFFLQFNGTETFISSPDGDGPVTHTVSSLTAG
TRYTFTLFSVFENVRSSGVQLPAVTAPENAEVFRPSSQNETSITLQWNKVKNNTSFVLQF
NGTETFISSPDGDGPVTHTVSSLIAGTRYTFTLFSVFENVRSSGVQLPAVTAPQNAEGFR
SLRQDETSITLQWDPVNNNVSFNLRYNGTELNVAAPTGNGPVTLTVPSLTAGTRYTFTLF
SVFENIRSSGVSIAAVTAPENAEGFRASKQDETSITLQWNKVNNNTSFVLQFNDTETFIS
SPDGDGPVNHTVSSLTAGTKYTFILYHVFMNVRSSAVNITVATAPLNAEGFRPSSQDETS
ITLQWNKVNNNTSFFLQFNGTETFISSPDGDGPVTHTVSSLIAGTRYTFTLFSVFENVRS
SGVQLPAVTAPQNAEGFRSLRQDETSITLQWDPVNNNVSFILRYNGTELNVAAPTGNGPV
TLTVPSLTAGSRYTFTLFSVFENIRSSGVSIAAVTAPENAEGFRSSKQDETSITLQWNKV
NNNVSFVLQFNDTETLISEPDGDGPVNHTVSSLTAGTKYTFILYHVFMNVRSSAVNITVA
TAPLNAEGFRPSSQDETSITLQWNKVNNNTSFFLQFNGTETFISSPDGDGPVTHTVSSLT
AGTRYTFTLFSVFENVRSSGVQLPAVTVENKRFITKIAIVH
NT seq
5886 nt
NT seq
+upstream
nt +downstream
nt
atgtgctcaaattgttgtccctccggcacagagtgcatcaccaccaatggagctgttcaa
tgtctcaacccctgtgccaactacactatactgaatgatacatggcgttcaacagataac
acagaccaaaatttcttacagtgcgacaagtctattacctggaatggctggtatcgcttt
tatttggggcaaagcagcgctcagattccagagaaatgtgtagcagaacgtagatgtgga
acccatgctcctttgtggataaacgggactcatccagtgcaatttaatgaaattgtaact
cgcactgtgtgtaatgcctggttgggttcctgctgccgttttacctcacacaccatccag
atcaaactttgttatggatactacgtctacaaacttcaacagccatctacatgctggctg
gcatattgtgcagaacttccactctttagagcatcatcacaaaatgagaccagcatcact
ctgcagtggaataaagtcaacaacaacaccagctttgttctccagtttaacggcacagaa
acattcatcagttcaccagatggagatggaccagtaactcacacagtctcatctctcact
gctggaactagatacacatttactctcttctctgtgtttgagaacgtcagaagtagtgga
gttcagctcccagcagttactgcccctcaaaatgcagaaggcttcagatcattgagacag
gatgagaccagtatcactctacagtgggatccagtcaataacaatgtcagcttcatcctc
cgatataatggaacagagttgaatgtagcggcaccaactggaaatggaccagtaactctg
acagtcccatctctcactgctggatctagatacacattcactcttttctctgtgtttgag
aacatcagaagcagtggagttcagctcccagctgttactgctcctgaaaatgctgaaggc
ttcagatcatcagaacaagatgagaccagcatcactctgcagtggaataaagtcaacaac
aacaccagctttgtcctccagtttaacggcacagaaacattcatcagttcaccagatgga
gatggaccagtaactcacacagtctcatctctcactgctggaactagatacacatttact
ctcttctctgtgtttgagaacgtcagaagtagtggagttcagctcccagctgttactgct
ccggaaaatgcagaaggtttcagaccatcatcacaaaatgagaccagcatcactctgcag
tggaataaagtcaacaacaacaccagctttgtcctccagtttaacggcacagaaacattc
atcagttcaccagatggagatggaccagtaactcacacagtctcatctctcattgctgga
actagatacacatttactctcttctctgtgtttgagaacgtcagaagcagtggagttcag
ctcccagctgttactgcccctcaaaatgcagaaggcttcagatcgttgagacaggatgag
accagtatcactctacagtgggatccagtcaataacaatgtcagcttcatcttccgatat
aatggaacagagttgaatgtagcggcaccaactggaaatggaccagtaactctgacagtc
ccatctctcactgctggatctagatacacattcactcttttctctgtgtttgagaacatc
agaagcagtggagtcagcattgctgcagtgactgctcctgaaaatgctgaaggcttcagg
gcatcaaaacaagatgagaccagcatcactctgcagtggaataaagtcaacaacaacgtc
agctttgtcctacagtttaatgacacagagacattcatcagttcaccagatggagatgga
ccagtgaaccatacagtctcatctctcactgctggaactaaatatacattcatactctac
catgtgtttatgaatgttagaagcagtgctgtaaacatcaccgttgctactgctccttta
aatgctgaaggtttcagaccatcatcacaagatgagaccagcatcactctgcagtggaat
aaagtcaacaacaacaccagctttttcctccagtttaacggcacagaaacattcatcagt
tcaccagatggagatggaccagtaactcacacagtctcatctctcactgctggaactaga
tacacatttactctcttctctgtgtttgagaacgtcagaagtagtggagttcagctccca
gctgttactgctccggaaaatgcagaaggtttcagaccatcatcacaaaatgagaccagc
atcactctgcagtggaataaagtcaacaacaacaccagctttgtcctccagtttaacggc
acagaaacattcatcagttcaccagatggagatggaccagtaactcacacagtctcatct
ctcactgctggaagtagatacacatttactctcttctctgtgtttgagaacgtcagaagt
agtggagttcagctcccagctgttactgcccctcaaaatgcagaaggcttcatatcgtta
agacaggatgagaccagtatcactctacagtgggatccagtcaataacaatgtcagcttc
atcctccgatataatggaacagagttgaatgtagcggcaccaactggaaatggaccagta
actctgacagtcccatctctcactgctggatctagatacacattcactctcttctctgtg
tttgagaacatcagaagcagtggagtcagcattgctgcagtgactgctcctgaaaatgct
gaaggcttcagggcatcaaaacaagatgagaccagcatcactctgcagtggaataaagtc
aacaacaacaccagctttgttctccagtttaacgacacagagacattaatcagtgaacca
gatggagatggaccagtgaattatacagtctcatctctcactgctggaactaaatataca
ttcatactctaccatgtgtttatgaatgttagaagcagtgctgtaaacatcaccgttgct
actgctcctttaaatgctgaaggtttcagaccatcatcacaagatgagaccagcatcact
ctgcagtggaataaagtcaacaacaacaccagctttttcctccagtttaacggcacagaa
acattcatcagttcaccagatggagatggaccagtaactcacacagtctcatctctcatt
gctggaactagatacacatttactctcttctctgtgtttgagaacgtcagaagtagtgga
gttcagctcccagctgttactgcccctcaaaatgcagaaggcttcagatcattgagacag
gatgagaccagtatcactctacagtgggatccagtcaataacaatgtcagcttcatcctc
cgatataatggaacagagttgaatgtagcggcaccaactggaaatggaccagtaactctg
acagtcccatctctcactgctggatctagatacacattcactcttttctctgtgtttgag
aacatcagaagcagtggagtcagcattgctgcagtgactgctcctgaaaatgctgaaggc
ttcagatcatcaaaacaagatgagaccagcatcactctgcagtggaataaagtcaacaac
aacgtcagctttgttctccagtttaacgacacagagacattaatcagtgaaccagatgga
gatggaccagtgaaccatacagtctcatctctcactgctggaactaaatatacattcata
ctctaccatgtgtttatgaatgttagaagcagtgctgtaaacatcaccgttgctactgct
cctttaaatgctgaaggtttcagaccatcatcacaagatgagaccagcatcactctgcag
tggaataaagtcaacaacaacaccagctttttcctccagtttaacggcacagaaacattc
atcagttcaccagatggagatggaccagtaactcacacagtctcatctctcactgctgga
actagatacacatttactctcttctctgtgtttgagaacgtcagaagtagtggagttcag
ctcccagctgttactgctcctgaaaatgcagaagttttcagaccatcatcacaaaatgag
accagcatcactctgcagtggaataaagtcaaaaacaacaccagctttgttctccagttt
aacggcacagaaacattcatcagttcaccagatggagatggaccagtaactcacacagtc
tcatctctcattgctggaactagatacacattcactctcttctctgtgtttgagaacgtc
agaagcagtggagttcagctcccagctgttactgcccctcaaaatgcagaaggcttcaga
tcgttgagacaggatgagaccagtatcactctacagtgggatccagtcaataacaatgtc
agcttcaacctccgatataatggaacagagttgaatgtagcggcaccaactggaaatgga
ccagtaactctgacagtcccatctctcactgctggaactagatacacattcactcttttc
tctgtgtttgagaacatcagaagcagtggagtcagcattgctgcagtgactgctcctgaa
aatgctgaaggcttcagggcatcaaaacaagatgagaccagcatcactctgcagtggaat
aaagtcaacaacaacaccagctttgttctccagtttaacgacacagagacattcatcagt
tcaccagatggagatggaccagtgaaccatacagtctcatctctcactgctggaactaaa
tatacattcatactctaccatgtgtttatgaatgttagaagcagtgctgtaaacatcacc
gttgctactgctcctttaaatgctgaaggtttcagaccatcatcacaagatgagaccagc
atcactctgcagtggaataaagtcaacaacaacaccagctttttcctccagtttaacggc
acagaaacattcatcagttcaccagatggagatggaccagtaactcacacagtctcatct
ctcattgctggaactagatacacatttactctcttctctgtgtttgagaacgtcagaagt
agtggagttcagctcccagctgttactgcccctcaaaatgcagaaggcttcagatcattg
agacaggatgagaccagtatcactctacagtgggatccagtcaataacaatgtcagcttc
atcctccgatataatggaacagagttgaatgtagcggcaccaactggaaatggaccagta
actctgacagtcccatctctcactgctggatctagatacacattcactcttttctctgtg
tttgagaacatcagaagcagtggagtcagcattgctgcagtgactgctcctgaaaatgct
gaaggcttcagatcatcaaaacaagatgagaccagcatcactctgcagtggaataaagtc
aacaacaacgtcagctttgttctccagtttaacgacacagagacattaatcagtgaacca
gatggagatggaccagtgaaccatacagtctcatctctcactgctggaactaaatataca
ttcatactctaccatgtgtttatgaatgttagaagcagtgctgtaaacatcaccgttgct
actgctcctttaaatgctgaaggtttcagaccatcatcacaagatgagaccagcatcact
ctgcagtggaataaagtcaacaacaacaccagctttttcctccagtttaacggcacagaa
acattcatcagttcaccagatggagatggaccagtaactcacacagtctcatctctcact
gctggaactagatacacatttactctcttctctgtgtttgagaacgtcagaagtagtgga
gtacagctcccagctgttactgttgagaacaaaagatttatcaccaagattgccattgtt
cactaa
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