Girardinichthys multiradiatus (darkedged splitfin): 124880526
Help
Entry
124880526 CDS
T08099
Symbol
pcdh7b
Name
(RefSeq) protocadherin-7b isoform X1
KO
K16498
protocadherin delta 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124880526 (pcdh7b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmu01009
]
124880526 (pcdh7b)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124880526 (pcdh7b)
Protein phosphatases and associated proteins [BR:
gmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124880526 (pcdh7b)
Cell adhesion molecules [BR:
gmu04515
]
Cadherins
Protocadherins
124880526 (pcdh7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
Mid2
TMEM154
Motif
Other DBs
NCBI-GeneID:
124880526
NCBI-ProteinID:
XP_047241645
LinkDB
All DBs
Position
14:complement(29133139..29296627)
Genome browser
AA seq
1262 aa
AA seq
DB search
MGTTAAADCLYYCILILQLVHQPAASKQVLRYRLAEEGPADVRVGNVAGDLGIVAGSGEV
TFTLESGSDFFKIDNITGELTTNERRIDREKLQQCQMIFDENECFIDFEVSVIGPAQSWV
DLFEGKVIILDINDNTPSFPSPVLTLSVEENRPIGTLYLLPTATDRDFGRNGIERYELIQ
DNGENSRRLGSSGDAYSGKRRFEEGASRSSVFELQVADTTDGEKQPQLIIKGALDREQRD
SYELTLRVRDGGDPPRSSQAILRVMITDVNDNSPRFEKNVYEADLPENSSPGAPILQLKA
VDADVGVNGQIEYVFGAATESVRRLLRLDESTGWLSVLHRIDREEVTQLRFTVMARDRGQ
PPKMDKATVVLNIKDENDNVPAIEIRKIGRIFLKDGVANVAEDVVVDTPIALVQVSDRDQ
GENGIVTCTVVGDVPFQLKPASEMEGEQNKKKYFLHTSATLDYEATQEYNVVIVAVDSGS
PSLASNNSLIVKVGDTNDNPPIFSQNVVEVSFPESNAPGERVTTVKAVDADSGKNAEIAY
FLDSSVNGIFSIDADSGDIRVNTILDREQKERYEFKVIAKDKGIYTLQGSATVVVLVGDK
NDNDPKFMQDVFTFYVKENLDPNSPVGMVTVIDADKGQNAEMGLFIEEEEEIFSIENETG
TIFSTLSFDREQKTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTFPINSSYTL
LPPSSNIRTVVRTVIATDTDTGINADLNYSIIGGNPFKLFEIDGGTGVISLMAKLEPKHF
GLHRLVVQVNDSGQPSQSTTTLVHVYVNETLSNSTVVEAQVAKSLSTSLNTNIAGDPNYD
LSKQRLSIVIGVVSGIMTVILIILVVVMARYCHPKNKNGYEAGKKDHEDFFTPQQHDKSK
KPKKDKKKQKSKQPLYSSIVTVEASKPNGQRYDGVNEKLSDSPGMGCYRSVNGGPGSPDL
ARHYKSSSPLPTVQLHPQSPTAGKKHQAVQELPPANTFVGTGDNISLGSDHCSDYSTQTI
NKYNKQPFRRVTFSVVSQPQDPHQQGSLQSCYDSGLDESETPSSKSSSGPRLGALPLPED
SYERTTPDGSVGEAEHMENDSRPLPDVAMTGKCTRECNEYGHSDSCWMPVRTSPERRPSK
STTNPQQQPKLSTFMTGTGSSGSSSSSGSVEQPGSQETLAMAAMANGDPTTTHMMGDRNR
NLLNKKMASSSSSYEAFGSPSYGSPGGGEETLGHPTEEIPLAPTGEYKPTSCGTLTRREV
YL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggaactactgcagcagcggactgtttgtactattgtatactcatattgcagcttgtg
catcagcctgctgcgagcaagcaagtgctccggtaccgcttggctgaggagggacccgcc
gatgtcagagttggcaacgtagcaggcgacctgggcatcgtggccgggtccggtgaggtg
acgttcaccctcgagtctggctcggattttttcaaaatagacaacataacaggtgagctc
accaccaatgagaggcggatagaccgtgagaaattacagcagtgccaaatgatattcgat
gagaacgagtgttttatagattttgaggtgtcagtgatcggaccggctcagagctgggtc
gacctatttgaggggaaagtcatcatattagacataaatgacaacaccccgtctttccct
tcgcctgtcctgacactatctgtggaggaaaaccggcccattggaactctttatctgctg
cccacagccacagacagagattttggcaggaatggaatagagagatatgagctcattcag
gacaatggggaaaactcaaggcgattggggtcttcaggggatgcttactctgggaaaaga
agatttgaggagggtgcaagcaggagcagtgtttttgaactgcaagttgctgacactacc
gatggagagaagcagccccaactcatcattaaaggggcccttgacagagaacagagagac
tcttatgagctcaccttgcgggttagggatggaggagatccccctcgctcatctcaggcc
attctgagagtgatgatcactgatgtaaatgacaacagcccccggtttgagaagaatgtt
tatgaagctgatctgccagaaaacagctcccctggcgcccccatacttcagcttaaagcg
gtcgatgcagatgtaggggttaacggtcaaattgaatatgtgtttggggcagccacagag
tccgtgagaaggctgcttaggttggatgagagcactgggtggctaagtgtgttgcaccgc
attgaccgtgaagaagttacccaactgaggttcacggtaatggcccgtgaccgaggccag
ccacccaaaatggataaggccacagtggtgctgaacatcaaggacgagaatgacaatgtt
ccagcaattgaaatcagaaaaattgggcgcatttttctaaaagacggtgtggccaatgta
gctgaggatgtggtggttgacacgcccattgccttagttcaggtgtcagaccgagaccag
ggagagaatggcattgtaacctgcacggtagtaggggatgtaccctttcagctcaaacca
gccagtgagatggaaggtgagcagaataaaaagaagtatttcctccacacatctgcaaca
ctggactatgaggccacacaggaatataatgtggtcatagtggctgtggactctggaagc
cccagtctggcaagtaataactctcttatcgtcaaagtaggcgacactaatgacaatcct
cccatcttcagccagaatgtagttgaggtatctttccctgaaagcaatgctcccggtgag
agggtgacaacagtaaaagctgttgatgctgacagtgggaaaaatgctgaaattgcatat
ttcctcgattcatctgtaaatgggattttctctattgatgcagacagtggagacatccga
gtaaacaccatattggatagagagcaaaaagagcgctatgaatttaaagtgatagctaaa
gataagggcatatacactcttcagggttctgcgactgtggttgtgctcgtgggggataag
aatgacaatgatccaaagtttatgcaggatgtgttcaccttctatgtcaaagaaaatctc
gacccaaacagcccagttggtatggttacagtaattgatgctgataaaggtcaaaatgca
gagatgggtcttttcattgaggaagaggaggaaatcttttcaattgaaaatgaaactggg
actattttttccacgctctcctttgaccgagagcaaaaaactacatatacattccgtgtc
aaagctgtggatggtggcgatccacccagatcagccacagccactgtctcactcttcgtc
atggatgaaaatgacaacgcaccgacagtcaccttccctataaacagctcctacactctt
cttcctccctccagcaacatcaggacagttgtcagaactgtcatagccactgatacggac
acaggcatcaatgcagacctgaactacagcatcattgggggcaaccccttcaagctattt
gagattgatgggggcacaggggtcatctcactgatggcaaagttggaaccgaaacacttt
ggtcttcacagacttgtagtccaggtgaatgacagtggtcagccttcacagagcaccacc
actctagttcatgtgtatgttaatgagacactttctaattccacagtagtggaggcacag
gtcgctaagagcctgagtacatcgctgaacaccaacattgcaggtgatcccaactatgat
ctcagcaaacagcgcttaagcattgtaattggagtagtttcaggcatcatgaccgtcatt
ctcatcattcttgttgttgtcatggcccgttattgccaccctaagaacaagaatggctat
gaggcaggcaagaaggatcacgaggactttttcacaccccagcagcatgacaaatccaag
aagcccaagaaagacaagaagaaacaaaagtccaaacagcctctgtacagtagcattgtc
actgtagaggcctccaaacccaacgggcaacgctacgacggcgtcaatgagaagctttcg
gacagccccggcatggggtgctatcgttcggtcaacggtggaccggggagcccagatctg
gctcggcactacaagtccagttcaccgctcccaactgtccagctacaccctcagtcacca
acagccggaaagaagcaccaggcagttcaggaactgccccctgccaacacctttgttggc
actggagataacatttcccttggatctgaccactgctctgactacagcactcaaaccatc
aacaagtacaacaaacagccgtttcgtcgagtgaccttctcggtggtgagccagccccag
gaccctcaccagcagggatcgctgcagagctgctacgacagcggcctggatgaatcggag
acgcccagcagcaagagttcttcgggcccccggctgggcgccctccccctgcccgaggac
agctacgagaggacaacgccggatggcagtgtcggtgaggcagagcacatggaaaatgac
tcccggcccttgcctgacgtagccatgactggcaagtgcacccgggagtgcaacgagtat
ggccactcggactcctgctggatgcctgtgcgcacatcgcccgagcgacggccttccaag
tcaaccaccaaccctcaacaacaaccaaagctttccacttttatgaccggcactggcagc
agcgggagcagcagcagtagtggcagcgtggagcagccaggtagccaagagacccttgcc
atggctgccatggccaacggagaccccaccaccacgcacatgatgggagaccgcaaccgc
aacctgctcaacaagaagatggcctcctcctcttcttcctatgaggcctttggctcgcct
tcctatggctcgccaggaggtggcgaggagacgctgggccaccctactgaggaaatcccc
ctcgcgccaactggagagtacaagcccacgtcctgtggcactctgacgcgacgggaggta
tacctgtaa
DBGET
integrated database retrieval system
