Girardinichthys multiradiatus (darkedged splitfin): 124880564
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Entry
124880564 CDS
T08099
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124880564 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gmu04040
]
124880564 (cnga1b)
Ion channels [BR:
gmu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124880564 (cnga1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
EMC3_TMCO1
DUF3043
PFF1_TM
MDM10
Sec62
CDC45
Tim54
NPR3
DDHD
CLN3
ADI
Serinc
DUF2126
ALMT
RR_TM4-6
Neur_chan_memb
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
124880564
NCBI-ProteinID:
XP_047241761
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All DBs
Position
14:complement(6731763..6744156)
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AA seq
662 aa
AA seq
DB search
MAKVAPLIPRHTPGLNPPTIVLQDMEEEPGDITKGVRSTQRAGPGALFNFNNSNNNEEEE
EEEKKRKKKEKKEKKEKREKEKQEKRERKEQKQKEKEEKEKEKQKEKEKLEKEKRAKEEA
AKEITVIDPAGNTYYHWLFIITIPVMYNWTLIIARACFEELQTDYLIMWFIVDFICDVIY
VLDMVFRSRTGYLEQGLLVKDEQKLRERYTKTFQFKLDLVSMIPTDILYLILGTTFPEIR
LNKLLRFNRMMEFFQRTETRTNYPNALRISNLVMYILIIIHWNACLYYSFSKAIGFGSDR
FVYPDPSDPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFAT
IVGNVGSMITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDER
EVLKYLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVFSPGDYICKKGD
IGREMYIIKEGKLAVVADDGVTQFVVLSEGSYFGEISILAIKGSKAGNRRTANIRSIGYS
DLFCLSKDDLMEALTEYPDAKALLEEKGRQILMKDGLLDLELAAQGPDPKEIEVKVDRMM
SNLDTLQTQYARLLAEHEATHSKLKHRVTRLEKKLAPTPREDLPGAAPPPPTPETTKEEE
KK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtagcaccactgatccctcgccatacaccggggttaaatccacccaccatc
gtgctacaagacatggaggaggagccaggtgacatcacaaaaggggtcagaagtacccaa
agagctggaccaggagctctgttcaacttcaataacagtaacaacaacgaggaagaggag
gaggaggagaagaagaggaagaagaaagagaagaaagagaaaaaagagaagagagagaag
gaaaaacaagagaaaagggagaggaaggagcagaaacagaaggagaaagaagagaaggaa
aaggagaaacagaaagaaaaagaaaagctagaaaaagagaagagggccaaggaggaagct
gccaaagagatcacagtgatcgatccggctgggaacacctactaccactggctcttcatc
atcaccatccctgtcatgtacaactggaccctgattatagccagggcgtgttttgaggag
ctgcagaccgactatctcattatgtggttcatcgtggactttatctgtgatgtcatctat
gttttggacatggttttcagaagcaggacaggttacctggagcagggtttgctggtgaaa
gatgagcagaaactacgtgagcgctacacgaaaaccttccagttcaaactggatctggtt
tccatgattcccaccgacatcctgtacctcattcttggtaccactttccctgagatccgc
ctcaacaagctgttacggttcaacaggatgatggagttcttccagcggactgagaccaga
acaaattaccccaatgctctgcgtatctccaaccttgtgatgtacatcctcatcatcatc
cactggaatgcctgcctctactactccttctccaaggcgattggttttggttctgacagg
tttgtgtatcccgacccgtcagatccagaatttggtcgtctggtgaggaagtatgcctac
agtatgtactggtccacgctaacactcaccaccattggagaaacacctccacctgtggag
aactcagagtacttcttcgttgtgacggacttcctggtgggtgtgttgatttttgccacc
atcgtcggtaatgtcggctcaatgatcaccaacatgaacgctgccagagccgacttccag
gcccggattgatgccatcaaacagtacatgagcttccgaaaggtaactaaagacctggag
aagcgagtgattaagtggtttgacttcctgtggaccaacaagaaagctgtagatgagagg
gaggttctaaagtaccttccggacaaactgagagctgagatagccatcaacgtgcacctg
gacaccctgaagaaggtccggatcttcgcggactgcgaggctggtctgttggtggagttg
gtgctgaagctgcagccgcaggtcttcagtccaggagactacatctgcaagaagggtgat
attggcagagagatgtacatcatcaaggagggaaagctggctgtggttgctgatgatggc
gtcacgcagtttgttgttctcagtgaaggaagttacttcggggagatcagcatcctggcc
atcaaaggtagtaaggcaggaaacaggaggactgctaacatcaggagcatcgggtactcg
gacctcttctgtctttccaaagatgacctgatggaggcgctgacagagtatcctgatgcc
aaagccctgctggaggagaagggaaggcagattctgatgaaggatggactgctggatctg
gagctggccgcacagggcccagaccccaaggagatcgaggtgaaggtggaccggatgatg
agcaatctggacacactgcagacccagtacgcccggctcctggcggagcacgaagccact
cacagcaagctcaaacacagagttacccgactggagaagaagctggcaccgacaccacgg
gaagacctgcctggtgctgctccgccccctccaacacctgagaccaccaaagaagaagaa
aagaaataa
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