Girardinichthys multiradiatus (darkedged splitfin): 124880928
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Entry
124880928 CDS
T08099
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu02010
ABC transporters
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124880928
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124880928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmu02000
]
124880928
Transporters [BR:
gmu02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
124880928
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
MukB
AAA_23
Motif
Other DBs
NCBI-GeneID:
124880928
NCBI-ProteinID:
XP_047242329
LinkDB
All DBs
Position
14:24701451..24985399
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AA seq
2241 aa
AA seq
DB search
MGLLMQFSLLLWKNFTLRKRQKVRLVVELLWPLFLFFILVGVRSTNKPFYKGQCHYPNKA
MPSAGVLPWLQGMICNIDNPCLNHPTPGETPGQVNNFNNSIIAGMLIELQSVLADRSILS
QVQLLVDDVDRWTSVLTKADPGKEILRSILRENETFTTHLTKDLLVPPAVVQSLMDAKIQ
LSPMMGIPRPGNVRSFLCEGTDLDGYVQFSSQAEREAFQNVSCSLSQQQLINTQQVLLQN
MDIRKVLSGPPFARDLNSMDIEAPMRKMTADALPLIENVVRLQNSMIFKAAESLDFQEDM
FGSVNMLLCGKHPNYNSTNMTFSLPSPTQMANNMSTSSMGNSSDAFCQILVDTLEGTPGL
RFIWSTFKPLLRGKVLYAPDTPAARLLVKEANSTFNSLAMVGELVDSWDELGPRVWDFLQ
NSPQVNTMRALLANPIFAAALNQRLSGTRWTAKLLENFLYNGPPEERPPGMPPYDWRDAY
NTTTQILKLISKFVGCWDLNKFEAAATEAQLVNKALEHLKNDTFWAGVVFQNLQPNSSHI
PTYVKYKIRMDIDEVERTNKVKARSWSPGARDNSFDDLRYIWGGFAYLQDMMDHAVIRLQ
TSKSQPLGVFVQQIPYPCFVDDAFIQSIGTILPMFLVLAFMYSVCMTIKSLVLEKELRLK
EVLRAVGVQNGALWSARFTENIVLLIVPCVLISVMVKYGKVLQYSDPSVIFVFLLVFCLA
TISQCFLISIFFSKANLAAACGGLIFFLLYLPHSLCYAWRDVMGFRAKLAVSLLSCVAFG
FGCENFSKYEEQGIGIRWHNVGGSPQEGDPYTFIVSIAMMLFDAVLYWVLTWYIENVFPG
QYGIPKPWYFPFTSSYWCGVTPVTENNPDLLTNSGADDGYFERPPPGVKVGVSIRNLVKI
YKTGKKLAVDGLSVDFFENHITSFLGHNGAGKTTTMSILTGLFPPTSGTALIHGHDIRTD
IDNIRKYLGMCPQHNVLFNELTVEEHIYFYARLKGCSRSEVKSEMDQMIKDVGLPHKRKD
LAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIILST
HHMDEADILGDRIAIISQGKMQCCGSSLFLKKCFGSGYYLTLVRDEMEKMTSQRKNIKQN
LSREEQTETDRPFRSSPDDGFGSHTWDNSDPTADLASVTQLVCRHVPEATFLESIGQEIT
FILPYSGARDGTFATLFHKLDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEIPSAK
EPLVRDWKRSSRESKRNSVATVHAKSDHNRLSELKEKCSNKVKDFSQGASLNGRGSMVIT
GWKLIRRQFLALFIKRFHHARRSRKGLIAQVVLPAFFVCLSLIFSLIVPPFSEYPSLELQ
PWIYGLPQTTFYSNDMPENLEVAKVADTLVNSPGFGTRCMHGNPIPALPCSPTNSNWFTP
SVDQSVTDIFLNGNWSMSNPSPSCQCSTPNRMIMLPDCPPGAGGLPPPQRVQNTTDTLLD
LTGRNMTDFLVKTLENLGKKRYGGISVGAVNSQVRLTEAEIEDVFRDLKALFNSSQDNVT
DQNLRRAETLLKKLGTRDNVKVWFYNQAWHGMVSFLSVANNGILRGNLPVGEDPRHHGIS
VSNHPLNLTKEQLSYMAMATTSTDVVVSICVIFAMSFIPASFVLFLIQERVSKAKHLQFV
SGVNPTIYWLTNFVWDMCNYIVPCFIVIVIFLCFQQKAYVSLPNLPALILLLLFYGWAIT
PMMYPASFIFSVPSTAYVVLTCINLFIGINGSVATFIMELFDDDNISRINDIVKQVLLIF
PHFCLGRGLIDMAKNQAMATLYISFGEDRFKNPLGWEMVGKNLLAMSIQGIVMFIFTILI
QYKFFCKSRLISAKPSATEEEDVDVARERQRVYEGRAQNDLLRIWDLTKVYPRKRTPAVD
RLCMGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNGYSIRREMRNVHQNMGY
CPQFDAINELLTGREHLEFYARLRGVPEVEVAMVAEWGIQKLGLVKYANKSAGTYSGGNK
RKLSTAISLIGCPPVVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEAL
CTRMAIMVNGRFKCLGSIQHLKNRFGDGYTVILRVGGSSPALKPVEDFVQQTFSDSILKE
KHHNTLQYQLPYTQGALASIFSLFTSNQHRLGVEDYSVSQTTLDQVFVNFAQQQHGEDDS
QSYSNPVDITDELPLRSLQTS
NT seq
6726 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgatgcagttctctctgctcctgtggaagaacttcactctccggaagaga
cagaaggtgcggctggttgtggagttgctgtggcctctgtttctttttttcatactggtg
ggagtgaggagtaccaataagccattttacaaaggccaatgtcactacccaaacaaagcc
atgccatctgctggcgttctgccctggcttcaaggtatgatatgtaacatcgacaatccc
tgtttgaaccacccaacaccaggagagacaccaggccaagtcaataacttcaacaactcc
ataattgctgggatgttgatagagctacagtctgttttggcagacaggtctatcctcagt
caagtgcagttgctggtagatgatgttgaccggtggacctcagttttgacaaaggctgac
cctggtaaagaaatcctaagaagtattctacgagagaatgaaaccttcaccacccatctg
acaaaggatttgttggttccaccagctgtagtccaaagcctaatggatgctaagattcaa
ctcagtcctatgatgggtatcccaaggcctggcaatgtgaggagcttcctgtgtgagggg
acggatctggatggctatgtccaatttagcagccaagctgagagggaggcttttcaaaat
gtcagctgctccctcagtcaacagcagctgattaacacccagcaagtccttctacaaaac
atggatatcaggaaagtgctttcagggcccccttttgctcgggacctgaattcgatggac
atagaggcaccaatgaggaaaatgactgcagatgcactaccactgatcgagaatgtggtc
aggctgcagaactccatgatctttaaggcagcagagtccctggattttcaagaggacatg
tttggaagtgttaacatgctgctgtgtgggaaacatcctaactacaactccaccaacatg
accttcagtttgccttcacctacacagatggctaacaatatgtcaacttccagcatgggc
aacagttctgatgccttttgtcagattctcgttgacaccctggagggcacacctggtctg
cgcttcatttggagcaccttcaagccattactgcgagggaaggttctctacgcaccagat
acacctgctgctcgcctcctagttaaagaagcaaacagcactttcaactccctagccatg
gtaggggagctggtagattcttgggatgaacttggaccacgtgtctgggattttttgcag
aacagccctcaggtcaacacaatgcgggctctgttggcgaatcccatcttcgcggcagcc
ctcaaccagcgcctcagtgggacaagatggacagccaaactactggagaacttcctgtac
aacgggcctccagaagaacgtcctcctggcatgcctccctatgactggcgagatgcttac
aataccaccactcaaatcctgaagctcatctccaaattcgtcggctgttgggatctgaat
aagttcgaagcagccgcgactgaagcccagctggtgaacaaagctttggagcatctgaaa
aacgatactttctgggccggagttgtctttcaaaacctccaaccaaactcaagccacatc
cctacctatgtcaagtacaaaatacggatggacattgatgaagtagaacgtacaaacaag
gtgaaagccaggtcgtggtctcctggagccagggacaactcctttgatgacctccgctac
atctggggaggctttgcctacctgcaggacatgatggaccacgctgttatacgactgcaa
acgtcaaagtctcagccgcttggtgtttttgtccagcaaatcccatacccatgctttgtt
gatgatgccttcatccagagtattggaaccattctgcccatgttcctggtgctggccttc
atgtactctgtgtgcatgaccatcaaaagcctggtgctggagaaggagctgcggctcaag
gaggtgctgcgagctgttggtgttcaaaatggcgccctctggtctgccaggttcacagag
aacattgttctgctcatagtcccatgtgtgctcataagtgtcatggtcaagtatggcaaa
gtcctgcagtacagcgacccctcagtaatctttgtcttcctgctggtgttctgtctggcc
accatctcccagtgcttcctcattagcatcttcttctctaaggccaatttagcggcggca
tgtggcgggctcatcttctttctcctctacctgccacacagcctctgctatgcctggagg
gatgtcatgggtttcagagctaagttggctgtgagtttgctgtcatgtgttgcctttggc
tttgggtgcgagaacttttccaagtatgaggagcaaggcatcggaataaggtggcacaac
gttggcgggagtccccaggagggggatccctacaccttcatcgtctccatcgccatgatg
ctctttgatgctgtcctatactgggtgctaacctggtacattgaaaatgtcttcccaggc
cagtatgggattcctaagccgtggtatttcccatttacttcatcttactggtgcggggtg
acaccagtaactgaaaacaaccccgatctgctgacaaactctggggcagatgacggatat
tttgaaagaccacctcccggtgtgaaagtaggggtgtcaattcgcaatcttgtcaaaatc
tacaaaaccgggaaaaagctggcggttgacggcctgagtgtggacttctttgagaatcac
atcacatcatttttgggccacaatggagctggaaaaacaaccacaatgtcaattctgaca
ggactgttcccacctacatcaggaacagccctcattcacggacatgacattcgcaccgac
atagacaacattcggaagtatttgggaatgtgtccgcagcataatgtcctatttaatgag
ctcactgtggaggagcacatttacttctatgccaggctgaagggatgtagtcgcagtgag
gttaaatctgagatggaccagatgattaaagatgttggtttaccacacaagcggaaggat
cttgctaagaacctgtcaggtgggatgcagcgaaaactttccgtggccatagcatttgtc
ggtggttcaaagattgtcatcctggatgaaccaacagccggagtagacccttatgctcga
cgggggatctgggaactactgttaaagtacaaacaaggtcgcaccatcattttgtcaaca
caccacatggatgaggcagacatcttaggagatcgcatagccatcatctcccaaggaaag
atgcaatgctgtggctcctcgctcttcctcaagaagtgtttcggcagtggctactacctg
actctggtcagagatgagatggaaaagatgactagtcaacgtaaaaatatcaaacaaaat
ctgtccagggaggaacaaacagagacagaccgtcctttcagaagtagtccagatgatggc
tttggcagtcacacgtgggacaattctgacccaacagcagatcttgcctctgtgactcag
ctagtgtgccgccatgtaccagaggctacatttttggagagcattggtcaggagatcacg
ttcatcctgccctacagtggagcaagagatgggacctttgccacactcttccacaagctt
gatcttgccatggctgaccttggcctgaccagctatggtatctctgacaccacattggag
gagatatttctcaaagtggcagaagatactggcgtggatgcagaaataccatcagcaaag
gagccattggttagagactggaaaagaagctctcgtgaatctaagaggaacagtgttgcc
accgtccacgctaaatcagaccacaacaggctgagtgagttaaaggaaaaatgttcaaat
aaagtgaaagattttagtcaaggtgccagcctgaatggaagaggatccatggtcatcacc
ggctggaagctgatcaggaggcagtttctggcactcttcatcaagcgcttccaccacgcc
cgaaggagccgcaagggactcattgcacaggtggtcttgcctgctttcttcgtgtgcctg
tctctgatcttctccctcatcgtcccaccattcagtgaatatccaagtctggagctacag
ccctggatatatggtctgccccaaaccacattttacagcaatgacatgccagaaaatttg
gaggtggctaaggtggcagacactttagtgaacagccctggttttgggacacgctgtatg
catggaaatccgataccagccctaccatgctcaccgactaactccaattggttcactcca
tctgtggatcagtcagtcacggacatcttcctcaatgggaactggagcatgtctaacccc
tcgccttcctgccagtgcagcactcctaaccggatgattatgttacccgactgtccaccc
ggagcgggaggtctccctccacctcagagagtacaaaacacaacagacactttactggat
ttaaccggacgaaacatgacagatttcctggtcaagactttggagaacttgggtaaaaaa
aggtatggaggcatttccgtgggagcggtcaactcacaagtccgtctaacagaggcagaa
attgaggatgtcttcagggatttaaaagccctgtttaactcatctcaggataacgtcact
gatcagaacctgcggagagccgaaacgctgctgaagaagctgggaaccagggacaatgtc
aaggtgtggttctataatcaagcatggcacgggatggtgtccttcctaagtgtggccaac
aacggcatcctgagaggaaatctacctgtgggagaggatccacggcatcatggcatctct
gtttctaatcaccccctaaacctaaccaaagagcagctctcctatatggctatggccacg
acctctacagacgtggtggtgtccatctgcgttattttcgcaatgtccttcatccctgcc
agctttgtcctatttctcatccaggagagggtgagcaaagccaagcatctacaatttgtc
agcggtgtaaacccaactatctactggttaaccaatttcgtctgggatatgtgtaactac
atcgtgccctgcttcatagtgatcgtgatcttcctctgcttccaacaaaaagcctacgtc
tcactgcccaacctgcccgctttgatactgctccttcttttttatgggtgggccattaca
cccatgatgtacccagcctccttcatcttcagcgtgcccagcacagcttacgtggtgttg
acctgcatcaacctctttattggcattaatggcagcgtggccaccttcatcatggagctc
tttgatgatgataatatttctcgcatcaatgacatagtgaagcaggtgctgctgatattc
ccacatttctgtctgggcagaggcctaattgacatggccaagaaccaggcgatggcaacg
ctttacatcagttttggtgaagatcgttttaagaatccactcggctgggagatggtggga
aaaaatctccttgccatgtccattcagggaattgtgatgttcatctttaccattctcatc
cagtacaagttcttctgcaaatcaaggctcatttcagcaaagccatcggctacagaggag
gaggatgtcgacgtcgcccgggaacgccagagggtgtacgaaggcagagctcagaacgac
ctgttgaggatctgggacctcacaaaagtataccctaggaagagaacccctgctgtggac
cggctatgcatgggtgtgcctgctgcagagtgtttcgggttgctggggatcaacggtgct
gggaaaacaacgacgttcaagatgctgacgggagacatcccagtctccagcggagaggcc
tttctaaacggatacagcatacgaagagaaatgagaaatgtacaccagaacatgggttac
tgtccccagtttgacgccattaatgaacttctgactggtcgagagcatctggagttttat
gctcggttaagaggggtaccagaagtagaggttgccatggtggctgagtgggggattcag
aagttagggctggtcaagtacgccaacaagtcagcaggaacctacagcggtggaaacaaa
cgcaaactttccacagcgatttccctgatcgggtgtccgccagtggttttcttggatgag
ccaaccactggaatggaccccaaagccagacgcttcctgtgggactgcatcttgagtgtc
atcaaagagggacgctcagtcattctcacatcgcacagtatggaggagtgtgaagcactg
tgcacccgcatggccatcatggtaaacggtcgcttcaagtgccttggaagcatccagcat
ctaaaaaacaggtttggtgatggctacacggttatcttacgtgtcggtggctcctctcct
gctctcaagccagtcgaggactttgtccagcagacattttcagatagcattctcaaggag
aaacaccacaatacactccagtaccagctcccatacacacagggagctttggccagcatc
ttcagcctgttcactagcaatcagcacaggctgggcgtggaggactactctgtgtcacag
accactctggatcaggtctttgtgaactttgcacagcaacagcatggggaggatgactct
cagagctacagcaacccagttgacattacagatgagctgccactgaggtcactgcagacc
tcctaa
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integrated database retrieval system
