Girardinichthys multiradiatus (darkedged splitfin): 124881214
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Entry
124881214 CDS
T08099
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03013
Nucleocytoplasmic transport
gmu03015
mRNA surveillance pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124881214 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
124881214 (acin1b)
03015 mRNA surveillance pathway
124881214 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124881214 (acin1b)
03041 Spliceosome [BR:
gmu03041
]
124881214 (acin1b)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124881214 (acin1b)
Spliceosome [BR:
gmu03041
]
Complex C
Other components
EJC/TREX
124881214 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
124881214
NCBI-ProteinID:
XP_047242710
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All DBs
Position
14:complement(30882819..30907814)
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AA seq
1200 aa
AA seq
DB search
MADKDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNTLIKRLKGALMLENLQRSSSSHS
GLQPNSQIGEEMCQNSFIKQYLAQQQELLRQRLAKEAQQEEEADESPTGPEEDEDQSEDN
DSPPFISKHQGSLNLASGSDVGGENSVIGHGPAPMFHHRESNEDPRGRKQRASFQQGHKE
PPASSPPRAVASFLVHVVGQPDSQGCPPTVAPGQEKEAATLSSPRTPNPVLNLSRSAQSS
SENHVQDDSDEDDDDDDDSDDDEDWGPGSGGARRRKAAVPSKHQVAPSMSSAAARSKRKL
QPPQHIPPPQVHDTPMQLRHPTPPPSPPPNLFPLPDTPKQSPPDDQEREAPRDARLVSFP
LPATQRQDSDSSSGSSSPEPPVKRRSGPLSLLMHKMESEEATSSPGFSGETAHSIATCSS
ESPLQSSETKTQQEIRETEEDRQLKEGREREQQQKLEREGLKTQEQEKKKKRLEEEREKE
RKHLEEERKQRQKEEQEKEKRSQEEEKEKKHKEEEKRREEQRLKEEEEKKQEKVRNDRRA
AAEEKDSGSSSDSDSKSESSDSHSSSSSSSSSRDKMQPASQLKKAAVGQEAEGNKTTKFS
KDSEKPILSKREVSEPSTAAVTEVEPDSESSMAQQPASGAEPESSESRMEESTTPKAFAA
RKISLTGSKASPASTDGGAGESETGGAAGRKRRWGSSTAVTVKKPSISITTDSLKSLIPD
IKVNQEVVVDLHPEEPQMSGDEENSDTGRSDPDQGLKIRRTVTQVVPSESQENGQTNVGE
DMEKTEGENQHKTSREKKKSGLSDETSETQMSVSLDGEAKKVTPSDSLVRRSISQQKSGV
SVTIDDPVRTTRQPSPPQGKVSNIIHVINLVRPFTLLQLKELLNRTGSVVEEGFWIDKIK
SHCYVTYATTEEAVATRTALHGVKWPPSNPKVLSIDFCEQDELDYHKGIRKPEKDQDHAA
LAAAPPQPRLPPLMPVRDRDKDQDRDRERDRDRDRGVRDLWAERQREMERRERARGEREW
DRDKVREFARPGEEGRRSRSRERERRRRERAKSKEKKTDKKEKGDEPPAKLLDDLFLKTK
AAPCIYWLPLTEEQANQRVLDRVERQKERERRRKEQEEEEDKKRDEEKKERLKAREKDSG
AAASGVASGRGADTERERNRGRDREGDKRRDSSHRSRRPSPVSGGGRRSRSRSNPRDRRR
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaagatattacgcttgatggaaaacctctacagtcgctccgagttgcggat
ttgaaagccgctctggagcaaaggaacctaccgaaaagcgggcagaaaaacactctcata
aagcgacttaaaggggctctgatgctggaaaacctccagagatcatcatcatctcacagc
gggctgcagccaaactctcagataggagaagagatgtgccagaacagtttcattaaacag
tacctggcccagcagcaggagctccttcgtcagaggcttgcgaaagaggcccagcaggaa
gaggaggctgatgaaagcccaacgggaccagaggaggatgaagaccagtctgaagacaat
gatagccctcccttcatcagtaagcatcaaggctccctgaacctggcctcaggttctgat
gttggaggagaaaattctgtgattggtcatggacctgctcctatgttccaccaccgagag
tctaatgaagatccaaggggcaggaagcagcgagcctcctttcagcaaggacacaaggag
ccaccagctagctcccctccaagagctgttgcctccttcttagtgcatgtcgtgggacaa
cctgacagccagggatgtccgcccaccgtggccccaggccaggagaaggaagcagctact
ctaagttctcccagaacacctaatccagtgctcaatctcagtcgatctgcccagagttcc
tctgaaaatcatgtgcaggacgacagcgatgaagacgatgacgatgacgatgatagcgat
gatgacgaggactggggacctggttctggaggggcgcgaaggagaaaggcagcggttccc
tcaaagcatcaggtggcccccagtatgtcatcagctgctgctagatcaaaacgcaagctt
cagcctcctcagcacatcccacctccacaggtacacgacactcccatgcagctgcggcat
cccacacctcctccctctccaccccctaacctgttccccctgcctgacactccaaagcaa
agccccccagatgatcaggaaagagaagctccacgtgacgcaaggttggtgtctttccca
cttcccgccacgcagaggcaagactctgattccagctctggctctagcagccctgaacct
cctgtgaagcgcaggtctggccccctttcactgctcatgcacaagatggagtcagaggaa
gcaacctcatctcccggattctctggagaaacggcacattcaattgccacatgctccagc
gaatctccccttcaatcatcagaaacaaaaacgcaacaggaaatcagagagacggaagaa
gacaggcagcttaaagaggggagagagagagaacaacagcagaagctggagagagagggt
ctcaaaacacaggagcaagaaaagaagaagaaacgcttggaggaggagagggaaaaggaa
agaaaacatctggaagaggagaggaagcagcgtcagaaagaggaacaggaaaaggagaaa
agaagccaggaagaggaaaaagaaaagaaacacaaagaggaggagaagagaagagaggag
cagcggctgaaagaggaagaagaaaagaaacaggaaaaagtgaggaacgaccgaagagcg
gcagctgaagaaaaagattcgggttcctcctcagattctgactccaaatcagagtcctct
gattcacactcatcatcatcctcttcttcctcctccagggataaaatgcagcctgccagt
cagctgaagaaggcagctgtaggacaagaggcggagggtaataaaacgactaagttcagt
aaagattcagagaaacctatcctttcaaaaagggaggtgtccgaacccagcacagccgct
gttacggaagtggaaccagactctgagagctccatggcccagcagccagcatctggagct
gagccagagagcagtgagagccgaatggaggagagtaccactccgaaggcttttgctgcc
cgcaagatatccctgactggcagcaaggcatctccggccagcacagacggaggagcagga
gagtctgaaacgggaggcgcagcagggaggaagaggcgatggggctccagcacagcagtc
actgttaagaaaccatcaatcagcattaccacggactccttgaagtccttgattcctgac
atcaaggtgaaccaggaagtggttgtggaccttcatcccgaggaaccgcagatgtccggc
gacgaggagaactctgacaccggtcggagcgacccagaccaaggcctcaagatccgacgc
accgtcacgcaggttgttcccagtgaaagccaggaaaatggacaaactaacgtaggagaa
gacatggagaaaacagagggtgaaaaccaacacaagacttcaagagagaaaaagaagagc
ggcctctcagatgaaacgtccgaaacccagatgtctgtcagcctagatggagaggcaaag
aaagtaactcccagcgacagtctggtgcggcgctccatcagtcagcagaagtccggtgtt
tccgtcacgatcgacgaccccgttcgcacaaccaggcagccctccccgcctcaaggaaaa
gtgtccaacatcatccatgtgataaacctggtccgacccttcactctgctccaactcaaa
gagctgctgaaccgaacagggagtgtggtggaggagggtttctggatcgacaagatcaag
tctcactgctatgtcacatacgcaacaacagaggaagcagttgccaccaggacagctctc
catggagtcaaatggcctcctagtaatcccaaggtgctcagtatagacttctgtgagcaa
gatgagctggactaccacaaagggatccggaagccagagaaagaccaggatcatgctgcc
ctggctgctgctcctccgcagccccggctgccccctctaatgcccgtgcgagacagggac
aaagatcaggacagagaccgggagcgtgatcgggacagggacagaggagtgcgggatctg
tgggcagagcgtcaaagggagatggagcggcgagaaagggctcgaggagagcgagaatgg
gaccgggacaaggtccgggaatttgccagacccggagaggagggacggcgatctcgttct
agagagagggagaggaggaggagggagagggccaaaagtaaggagaagaagactgataag
aaggagaaaggagatgaacctcctgctaaactgctagatgacttgtttctcaagaccaaa
gcagctccctgtatatactggctccccctcactgaggaacaggcgaaccagagggtctta
gaccgcgttgaacggcagaaggagcgcgagcgaagacgcaaggagcaagaggaggaggag
gacaaaaaacgtgacgaggagaaaaaagagaggctcaaggccagggagaaggatagcggc
gctgcagcaagcggcgtagcgtccgggagaggagccgataccgagagggagcggaaccgt
ggccgagacagagaaggggacaagaggagggacagcagccaccgatccaggcgaccctcg
ccagtgtcaggcggcggacggcgttcccgtagtcgcagcaaccctcgggacaggcgccgc
tga
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