Girardinichthys multiradiatus (darkedged splitfin): 124881516
Help
Entry
124881516 CDS
T08099
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124881516 (ddx1)
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124881516 (ddx1)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124881516 (ddx1)
Spliceosome [BR:
gmu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124881516 (ddx1)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
124881516 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
Motif
Other DBs
NCBI-GeneID:
124881516
NCBI-ProteinID:
XP_047243062
LinkDB
All DBs
Position
15:21028151..21036298
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLMDQHEGKKGRASVKTGGAVFNTWQMNPYDRSPAFAIGPDGFCCQSREFKEWH
GCRSTKGVTKGKYYYEVTCHDQGLCRVGWSTSQAALDLGTDKHGFGFGGTGKKSNNKQFD
SYGEEFTMHDTIGCYLDLDKGQMSFSKNGNDLGLAFEIAQNVGCQGFFAACVLKNAELKF
NFGGEDFKHPPKGGFVALDQASDGHTIKSSQTGSAKVTQVKASSNAPKALIIEPSKELAE
QTFNNVKQFKKYVENPKLRELLVIGGVAAKEQLAVLEQGVDIVVGTPGRLDDFVSTGKLS
LSQVRFLVLDECDGLLTAGYTDFINRIHKQIPQVTSDGKRLQLIVCSATLHSFDVKKLSE
RIMHFPTWVDLKGEDSVPETVHHVVVPVNPKADRLWERLGKNHIQTDEVHAKDNTRPGAN
TPEMWSEAIKMLKGEYTVRAVKEHKMDQAIIFCRTKIDCDNMEKYFIQQGGGPDSKGHQL
SCVCLHGDRKPNDRKNNLDRFKRKDVRLLICTDVAARGIDISGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAMEKEKVWYHVCPNRGKGCYNTRLKEDGGCTIWYNEKELLS
EIEEHLKCTITQCDADIKVPVDEFDGKVTYGQRRALGGGNYKGHVDVLAPTVQELANLER
DAQTSFLHLGYMPNQLFRAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttttctgaaatgggagtcatgcctgaaatcgcgcaggctgtggaggagatg
gattggctactgccaacagacatccaagcagagtccattcccctgattcttggtggagga
gatgttctcatggcagcagaaactggaagtggaaagacaggggccttcagtatccccgtc
atccagattgtctacgagaccctgatggatcagcatgagggcaagaagggcagagcctct
gttaaaactggaggagcagttttcaacacctggcagatgaatccatacgatcggagccca
gcctttgcaatcggccctgacggattctgctgccagagcagggagtttaaagagtggcat
ggctgccgctccactaaaggtgtcacaaaagggaagtactactatgaggtgacctgccat
gatcagggtctctgtcgtgtgggttggtctaccagtcaagctgctctggatctgggaacc
gacaagcatggttttggttttggtgggactggaaagaaatccaacaacaagcagtttgac
agctatggggaggagtttaccatgcatgacaccatcgggtgctacctggacttagacaaa
ggacagatgtccttctctaaaaatgggaacgatctgggattggcttttgaaatcgctcaa
aacgtagggtgtcagggttttttcgccgcatgcgtccttaagaatgctgagctgaagttc
aactttgggggagaagactttaaacacccccctaaaggtgggtttgtcgccctggatcag
gcatcagatggtcacacaatcaaatcttcccaaacaggcagtgccaaagtgactcaagtg
aaagcttcttcaaacgcacccaaagccctgatcattgagccatctaaagagctggcggag
cagaccttcaacaatgtcaagcagtttaagaaatacgtagaaaatcccaagctgagggag
cttcttgtgattggaggtgttgcagccaaagagcagttggcagttctggaacagggggta
gacatagtggtgggaacacctggaagactggatgactttgtttctactgggaaactaagt
ctgtcccaagtccgtttcctggtcctggatgagtgtgatggtctcctaacagccggatac
acagactttatcaacaggatccataaacaaatccctcaggttacctctgacggcaagaga
ctgcagctcattgtgtgctcagccacgctgcactcctttgatgtgaagaagctgtccgag
cgcatcatgcattttcccacctgggtggacctgaaaggtgaggactctgttccagagacc
gtccaccacgtggtggtgcccgtcaacccgaaggcagaccgactgtgggaacgcctcggc
aagaaccacatccagaccgatgaagttcatgccaaagacaacacgcgaccaggagccaat
acaccagaaatgtggtcagaagctatcaagatgctgaagggcgagtacacagtcagggcc
gtcaaagagcacaaaatggaccaggccataatcttctgtcgcaccaagatcgactgtgac
aacatggagaagtatttcattcagcaaggaggaggtccagacagtaaaggtcaccagctt
tcctgtgtttgccttcatggtgatcgaaagccaaacgaccggaaaaataacttggatcgc
ttcaagagaaaagacgtgaggctgttgatctgcacagatgtggctgcgagagggattgac
atcagcggcgtcccttatgtgattaacgtcaccctgcctgatgagaagcaaaactacgtc
catcgtatcggccgagttggaagagccgagagaatggggcttgcgatctccctggttgct
atggaaaaagaaaaggtgtggtaccatgtttgcccgaatcgaggcaaaggctgctacaac
acccggctgaaggaggatggagggtgcaccatatggtacaacgagaaagagcttctgtct
gaaatcgaagagcatctgaagtgcaccattactcagtgtgacgcagatattaaagtacct
gtggacgagtttgatgggaaagtgacttatggacagcgcagagctctgggaggtggaaac
tataagggccacgtggatgttctggccccgacagtccaggagttggccaaccttgagaga
gatgctcaaacatcgttccttcatttaggatacatgccaaaccagctcttcagagccttc
tga
DBGET
integrated database retrieval system
