Girardinichthys multiradiatus (darkedged splitfin): 124881916
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Entry
124881916 CDS
T08099
Symbol
afdna
Name
(RefSeq) afadin isoform X1
KO
K05702
afadin
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04520
Adherens junction
gmu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124881916 (afdna)
04530 Tight junction
124881916 (afdna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_2
PDZ_2
RA_3
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
124881916
NCBI-ProteinID:
XP_047243796
LinkDB
All DBs
Position
15:complement(5631852..5745551)
Genome browser
AA seq
1875 aa
AA seq
DB search
MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR
VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERQLDLDEKPLVVQLNWNKD
DREGRFVLKNENDILPKKSQSNGPEKEKDGVIQNFKRTLSKKEKKKEKKREKEFARIPDG
DEQILGREDGENSCLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFMSSDGR
PESGGTLKIYADSLKPNIPYKTILLSTRDTADFAVVEALEKYGLEKEYPREYCIARQDDK
TCKEVILDDLECPLQILRDWPADRGSLVFQLKKRPSDYQARKGRKDDKGLRGKDGLMPPE
KLPYLVELSPGRGNHYAYYAYRHQEDGSDSRDKPKLYRLQHSITEVGSDCTEDGAIQLLG
PGILPHHCNLMHSEGMVTVTPHGPVADTFVDGQRITETTVLRSGSTLQFGLAHVFKFVDP
MFDQGGKRDPNAAMRSRYKSGSVPETTFDLRGDVHIGAALPTSKSSGKLEMERGMVKPMI
RGEQQDSSRSQDPSADRTELTLPASIDFRENSEDTFLSAIINYTNSSTVHFKLSPTYVLY
MACRYVLSPTYRPDMSPSERTHKVIAIVNKMVSMMEGVIQDNDEGDQKQKNIAGALAFWM
ANASELLNFIKQDRDLSRITLDAQDILAHLVQMAFKYLVHCLQADLNNYMPAFLDDPEEH
NPQRPNIEDVLNTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFNKLVTDADSGLCC
HYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSMQDVQNIHNTCFK
LNSLQLHALMTNYRCAQDEPYIPSELIDHVVAVAENTADELARSDGREVQLEEDPDLQLP
FLLPEDGYSCDVVRHLPNGLQDFLDPLLQRGFCRLTPHPRSPGTWTVHFEGADNDNHFSA
DNSEMPMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQEKLGIYIKSVVKGGAADVDGRLAA
GDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATLLNQPSPMMQRAS
DRGRDKNGKMRPKSEGFELYNNAVQNGDPESPQPGWDSYAEPKRMSGEDRLLKNRVDHRS
SPNVANQGQNPATKSVYPGGPGTKITSVSTGNLCADEEPSPPHPEAYPIPTQTYPREYFT
IPASKSQDRVVGPVQVPPQHWQGMEDRERLPVVDNIHNNSMQRINLSQEDLYPPPGIMRP
DERMQPLYPQDYQHRDLDYQHRGVGAPPDHWTPQPQIPSSLESSTSSQEHLNFSASSISS
NKGQNQKTGPGRWKTPNAPHVVPPHSVQPPSRSDLPPPPPPPPTVYPDPYDPQPDLPLPL
PPATISPATAQQAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQVRANPVMPVQ
PHNNGGAMPLPHHQPPMASMAPPQPYHPPQPPPSRLEKLSSLPRSVVPPPTTASNSAAMD
TVIRELLPQQQPRTIERRDLQYITISKEELSTSDSLSPDPWKRDAREKAEKQQQLHIVDL
LDKEIQELQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEDEEEEDDEDMDRMLIVQ
RLEAEKRVRQQTAVPAISVLDLLQDEERRRKQQLEEIRKREAEERAKQEEERRWREEERA
KREAEEKRRQEEEYYTRLEAERRRRQHEEAERKLLTPDEPAGLYRPPLPRDYQPPAPHNP
TNTPPPPPQRNTSYLKTQVISPDTLYTAKFVSYAGDEEDEEEGKEANSAGSGGQSGFNSH
TGNSTGVVGSGEVYKDLRDKWTKSQEQENSIPSDAPESLTFKERQRLFSQGKEVSDKVKA
SRKLMELENELNTKQ
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggagcagggaggaggagaggaggaaactggccgacatcatcaaccattggaac
gctaaccggctcgacctgttcgagatcagccagcccacagaggaccttgagttccatggc
gtgatgcggttctacttccaggaccgggtggctggcaactttgccaccaagtgcattagg
gtctccagcacagctacgacacaggacgtcatcgagacgctagctgagaagttcagaccg
gatatgaggatgctgtcgtcaccgaagtactccttgtatgaggtccacgtcagtggtgaa
gagcggcagttggacctggacgaaaagccgcttgttgttcagctgaactggaacaaagac
gacagagaggggcggtttgtcctgaagaatgagaacgacatcctgcccaagaagagtcag
agtaatggaccagagaaggagaaagatggagtgatacaaaacttcaaaaggactttgtcc
aagaaggagaagaagaaggaaaagaagagggaaaaagagttcgctcggatccccgatgga
gacgagcagattctaggccgcgaggacggggagaacagttgtctggcagcagaggtttat
aaggatatgccagaaactagcttcaccaggacgatctcaaacccggaggtggtgatgaag
aggaggaggcagcagaaactggagaaacggatgcaggagtttatgagcagcgatggaagg
ccagagtcagggggaactctgaagatttacgccgacagtctgaagcccaacatcccctac
aagaccatcctgctgtccaccagagacacagcagacttcgctgtggtggaggctctggag
aagtacggattggagaaggagtaccccagggagtactgcatcgctcggcaagatgataag
acgtgcaaagaggtgattctggatgatttagagtgtcctctgcagatcctcagagactgg
cctgcagacagaggatcgttggtgttccagctgaagaagagaccttcggactaccaggcc
aggaaaggaaggaaggacgacaaagggctcagaggaaaggatggcttgatgccgcccgaa
aaactgccttatttggtggagctgagtccaggccgagggaatcactatgcctactacgct
tatcggcaccaagaagacggttccgactcccgagacaagcccaagctgtaccggcttcag
cacagcatcactgaggtgggctcagactgcacagaggatggagccatccagcttcttggc
ccggggatcctgccccaccactgcaacctgatgcacagcgaaggtatggtgacggtgacg
ccgcatggccccgtcgctgacaccttcgtggacgggcagcggatcacggagaccacggtg
ctgcgctccggatccactctccagtttggcttggcacacgtctttaagtttgtggatccg
atgttcgaccagggagggaagagggatccaaatgctgccatgaggagccgatacaaatct
ggcagcgtaccagagaccaccttcgacctccgtggagacgtccacattggagcagccctg
cccaccagcaagagctcagggaaactggagatggagagaggcatggttaaacccatgatc
agaggagagcagcaggacagcagcaggtcccaggatccttctgcagacaggactgagctg
actcttccagccagcatcgacttcagagaaaattctgaagacacattcctgtcggccatc
atcaactacaccaacagctccacagtccacttcaagctgtcgcccacttatgtcctgtac
atggcctgccgctacgtcctgtcgcccacttatcggcccgacatgtcgccgtcggagagg
acgcataaagtcatcgccatcgtcaacaagatggtgagcatgatggaaggagtcatccag
gataatgatgaaggggatcagaaacagaagaacattgcaggagccctggctttctggatg
gccaacgcctccgagctgctaaacttcatcaagcaggaccgggacctgagccgcatcacg
ctggatgcccaggacatcctcgcccacctcgttcagatggccttcaagtacctggtccac
tgtctacaagctgatctgaataactacatgccagccttcctggatgaccctgaggagcat
aatccacaaagacccaatatcgaggacgtcctgaacactctgacgggcgccatgtcgttg
ctccgtcgctgccgggtcaacgccgccctcaccatccagctcttctcacagcttttccac
ttcatcaacatgtggctgttcaacaagctggtgacggacgccgactcagggctgtgctgt
cactactggggggccatactccggcagcagctgagccacattgaggcctgggctgagaag
cagggcctggagctggctgcagactgccacctcagccggattgtccaggccaccaccctg
ctgaccatggacaaatactccatgcaggacgtgcagaacattcacaacacctgcttcaag
ctcaactccctgcagctccacgccctcatgaccaactatcgctgtgcccaggatgagccg
tacatcccctctgagctcatagaccatgtggtggcagtagcggaaaacacagcagatgag
ctggcgaggagtgacggcagagaggtgcagctggaggaggatccggaccttcagctgccc
ttcctcctcccggaggacggttactcttgcgacgtggtgcgccacctccccaatggtctg
caggacttcctggacccactgctgcagagagggttctgtagactaaccccacatccgcgc
tctcctggtacctggactgttcactttgaaggagccgacaatgacaaccacttctctgct
gacaacagtgaaatgccaatgaggaaagagccagaggttgtcacggtaaccctgaagaag
cacaatggcatgggcctcagcatcgtagctgccaagggtgctggtcaggagaagctcggc
atctacatcaagtctgttgtgaaaggcggagcggctgatgtggacggccgtttggcagca
ggtgaccagttgctgagcgttgatggacgcagtctggtcggtctgtcgcaggagagggct
gcagagctgatgacgaggacgggctctgttgtaactctggaggtcgccaagcagggagcc
atctaccacggactggcgacgctcctcaaccagccgagccccatgatgcagagagcgtcg
gaccgaggccgtgataagaacgggaagatgcggccaaagagcgaaggctttgagctgtac
aacaacgccgtgcagaacggcgatccagagagcccgcagcctggctgggactcttacgca
gaaccaaagaggatgagcggagaagaccgcctgctgaagaaccgggtcgaccaccgctcc
agccccaacgtagccaatcagggacagaatccagctaccaaatcggtgtaccctggagga
ccaggcaccaagatcacctccgtctccactgggaacctgtgtgcagacgaggagccctcc
ccgccgcaccccgaggcctaccccatccccacccagacctaccccagagagtacttcacc
atcccggcctccaagagccaggaccgggtggtgggtccagtacaggtgcccccgcagcac
tggcagggcatggaggacagagagcgcctgcctgtggttgacaacattcacaacaatagc
atgcagcggattaatctctcccaggaagatctgtaccctccaccgggaataatgaggccc
gatgagcgcatgcagccgctctacccgcaggactaccagcaccgggatttggactaccaa
cacagaggtgtgggagctccaccggaccactggacgcctcagccacagattccttcttcg
ttggagtcatcgacatccagccaggagcatctcaacttctctgcttcctccatttcttca
aacaagggccaaaaccagaagactgggccgggccggtggaagactcccaatgcaccgcac
gttgtgccgccgcactcggtacagccgccatctcgctccgacctgccgccgcctccaccg
ccgccgcctaccgtttaccccgacccctatgatccccagcctgacctgccgctgccgctg
cctcccgccaccatcagcccggcaacagcccagcaagctgccgaccgcaagaaacgggag
gagcagcagcgttggtatgagaaggagaaagctcggctggaggaggaacgagagagaaag
aggagggagcaggagagaaagctgggtcaggtccgggccaaccccgtcatgcccgtccaa
ccccacaacaatggtggagccatgcctcttcctcaccaccagcctcctatggcctccatg
gccccgccccagccgtaccaccccccacagcctccaccatccagactggagaagttgtcc
agcctgccgcggtcagtggtacctcctcccaccacggcctccaactctgccgccatggac
acagtgatcagggagctgcttccacagcagcagccgcggaccatcgagcgacgagacctg
cagtacatcaccatcagtaaggaggagctatcgaccagcgacagcttgtctcctgatccc
tggaagagagacgcccgcgaaaaggcagagaaacagcagcagctccacatcgtggacctg
ctggacaaagagatccaggagttgcaggcgaaacccgagcgaacagcagaagaaagcgac
cgcctcaggaagctgatgctggaatggcagttccagaagcggttgcaggagtccaaacag
agcgacgaagatgaagaggaagaggacgatgaggacatggacaggatgctgatcgtgcag
aggctggaggctgagaagagagtcaggcagcagactgctgtcccagctatctctgttcta
gacttgttgcaggacgaggagcggcggcgtaagcagcagctggaggagattcggaagagg
gaggcagaggagcgagcaaagcaggaggaagagaggaggtggagggaggaggagagagcc
aaacgagaggcggaggagaagaggagacaggaggaggagtactacacccgcctggaggct
gagcggcggcggcggcagcacgaggaggctgaaagaaagctgctgacgcctgacgagccg
gccggtctgtatcggcccccgctgcctcgggattatcaaccccccgccccccacaaccct
actaacacccccccacccccacctcagagaaacacctcctacctcaaaacacaggtcatc
tcgcccgacacgctctacacagccaaattcgtctcctatgcaggcgatgaggaagacgag
gaggaaggcaaggaagccaattcggcagggagcggcggccagtcagggtttaattcgcac
actggaaactcgacaggagttgtaggatcaggagaagtctacaaggacctgagggacaaa
tggacaaagagtcaggaacaggagaactcgatccccagcgacgctccagagagtctgacc
ttcaaggagcgccagcgcctcttctctcaagggaaggaggtttccgacaaggtcaaggct
tctcgcaaactcatggagctggagaacgagctcaacaccaagcagtag
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