Girardinichthys multiradiatus (darkedged splitfin): 124881944
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Entry
124881944 CDS
T08099
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124881944 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124881944 (hbs1l)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
124881944 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
124881944
NCBI-ProteinID:
XP_047243894
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Position
15:complement(20255632..20294192)
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AA seq
701 aa
AA seq
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MSRHRNVRGYNYDEDFEDDDMYGQSVEDDYCISPATANQFIYSRRELQAPKQEPLEEEEY
EVEDVPMSPCVDVNLDPLNQAKLYSCLDHMRAVLGDAVPDSVLTHAAMKHGFDPQRALDA
VLSEDAKTAPVTRSAAEDMQLVGRVVQEKMPLPQRTKQEAVAEKAKSRDAAPDKLDSEVV
PKVARMTVSGKKQTMGFDVPSLGENGVVASPARRGDSPENNNATPVSEAASKRPETLSKG
SNGDEVSVVTPGRSSGKARQAINIKAELERRQGGKPLLNLVVIGHVDAGKSTLMGHLLYL
LGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVTLM
DAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQLAV
AVNKMDQVNWQLERFQEISSKLGHFLKQAGFKESDVFFIPTSGLSGENLTKRSAVSELTS
WYTGPSLLEQIDAFKAPQRSTDKPFRLCVSDVFKDQGSGFCVTGKIESGYVQTGEKILAM
PPNETCTVKGITLHDEALDWAVAGDHVSLTVTGMDIIKINVGCVFCDLKDPIRVCTRFRA
RILLFNIEVPITQGFPMLLHYQTVSEPATITKLISVLHKSSGEILKRKPKCLSKGMNAIV
EIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccatagaaatgttcgtggttacaactacgatgaagactttgaagatgatgac
atgtatggacagtctgtggaggatgactactgtatttcaccagcaacagcaaatcagttc
atttattcacgccgagaactgcaagcaccaaaacaggagcctttagaggaggaagaatat
gaagttgaggatgttcccatgtccccttgtgttgatgtcaaccttgaccctcttaatcaa
gcgaagctgtattcctgtttggaccacatgcgggcagtactgggagatgcggtgccagac
tccgttttgacccacgctgccatgaagcacggatttgacccacagagggcactggacgca
gtgctgtctgaagacgctaaaacagccccggttaccagaagtgcagctgaagacatgcag
ttagttggccgagttgttcaggagaagatgcctcttccacagagaaccaaacaggaggct
gtggctgagaaagccaaaagcagagatgctgctcccgataaactggactctgaagtggtt
cccaaagtggcccgaatgaccgtctctgggaagaagcagactatgggctttgatgttccc
agcttaggggaaaatggcgttgtcgccagcccggcacggcgaggcgacagccctgaaaac
aacaatgcgactccggtctctgaggctgcctccaaacgtcctgagaccctgtcgaaagga
tcgaacggagatgaggtctctgtcgttacaccaggacgctcctccggaaaagcacggcag
gccatcaacatcaaggcagagctggagaggagacaagggggcaaacctctgttaaattta
gtggttataggtcatgtagatgcaggtaagagtacgctgatgggccacctgctttatctg
ctggggaacgtcaacaagcgcaccatgcacaagtatgaacaggagtcgaaaaaggctgga
aaggcctcctttgcctacgcctgggttctggatgaaactggcgaggagagggacagaggg
gtgacaatggacgtgggcatgacaaagtttgagacaaactctaaggtggtgactctaatg
gacgcaccaggacacaaagacttcattcccaacatgatcacaggagctgcacaggctgat
gttgcggtgcttgtggtagatgccagcagaggagagtttgaggcaggctttgaagcaggg
ggtcagaccagagagcacgccctgcttgtgcgttcgctgggtgtcactcagctggctgta
gctgtcaacaagatggaccaggtaaactggcagctggagcgtttccaagaaattagctca
aaactcggccattttctaaagcaggcaggattcaaggaatctgatgttttcttcatcccc
accagcggcctgtcaggagaaaatctcactaaaagaagtgcagtatcagagctcacttct
tggtacaccggacccagccttctggagcagattgatgcgttcaaagcccctcagcggtca
acagacaaacctttcagactgtgcgtctcagatgtgttcaaagatcagggctcaggcttc
tgtgttactggaaagattgagtctggttacgttcagacaggagagaaaatactggctatg
cctcccaatgaaacctgtacagttaaaggaatcactcttcacgatgaggctctggactgg
gctgtagcaggagaccatgtcagcctcacagtcactggaatggacatcatcaagattaat
gttggctgtgtgttctgtgatctcaaagatccgattcgagtctgtactcgattcagagcc
agaattttgctcttcaatattgaggttcccatcacacaaggctttccaatgctgttgcat
taccagacagtgagcgagccggccaccattacgaagctaatcagcgttctacacaagagt
agtggtgaaatcctcaagaggaagccaaagtgtttgagtaagggtatgaacgccattgtg
gagattcagacccagaggccggtgtcattagagctatacaaggactacaaagaactgggg
cgcttcatgctgagatatgttggctccaccatcgctgcaggtgttgtcacagagatcaaa
gaatga
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