Girardinichthys multiradiatus (darkedged splitfin): 124882087
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Entry
124882087 CDS
T08099
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04140
Autophagy - animal
gmu04148
Efferocytosis
gmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124882087 (vps18)
04148 Efferocytosis
124882087 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
124882087 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124882087 (vps18)
Membrane trafficking [BR:
gmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
124882087 (vps18)
Hops complex
124882087 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
zf-RING_2
zf-C3HC4_2
zf-ANAPC11
zf-C3H2C3
zf-RING_UBOX
zf-RING_11
zf-rbx1
DUF5600
DUF1664
DUF4446
Apolipoprotein
Motif
Other DBs
NCBI-GeneID:
124882087
NCBI-ProteinID:
XP_047244202
LinkDB
All DBs
Position
15:23085645..23095708
Genome browser
AA seq
982 aa
AA seq
DB search
MASILDEYEDSQNIRQSSQQHSRLSSANIGLTHSGFVNVRLEEEKPIFNKQRIDFTPPER
INHLAVCNNQLCMSLGKDTLLRIDLAKPDQPNQTELGRKDDSKVHKLFLDPTGSHLLISL
STSECLYLNRNTQKVRSLSRWRGHLIDSVGWNKLLGNDTSTGPILVGTSQGIIFEAEISA
NEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLEIERGPENKYFIIATTRKRLFQFVGKVA
EGSEQQGFSTIFNQNQDLLPSFQEFPANMGYSEITFYTAKLRNFPKAFAWMMGNGVLYGQ
MDYVRPDSLLSDVQVWEYTPDVDISQNKPISIVLTQFHFLLLLHDRIKAICTLNGQVVFE
DVFPDKFGPLKRMIKDPIGGLVWIYTERAVFRYHIQREARDVWQMYMSMNKFDLAKEYCR
DRPECMDMVLAKEAEYCFLNRRYLESAKCYAMTQNYFEEIALKFIEAKQEEALKEFLLKK
LNNLKQSERTQITLLVTWLTELYLNRLGQLESDGNSLIFQETRDEFHQFLSSSKHRECLF
NNRGTIYDLLASHGNVDDMVYFSVVMQDYERVISHHCQHDNFSAALDVLAKHCNEKLFYK
FSPVLMQHIPKNVVDAWIQMGKKLDPKKLIPALMNYSQMGSAQQIKETIRYMEFCVYELN
VTEEAIHNYLLSLYAKYKTDSLLQYLRQAGTHPSEIHYDLKYALRLCAEHGFLKACVLVY
RIMELHEEAVDLALQVDVDLAKSCADLPEDDEEMRKKLWLKIARHVVQEEKDVKKAMNCL
SSCNLLKIEDILPFFPDFVTIDHFKEAICSSLEEYNKHIEELKQEMEEATESAKRIREDI
QEMRNKYGVVDSQEKCAACDFPLLNRPFYLFLCGHMFHNDCLFQEVTPHLSTFKQNRLEE
LQKKLAATTQSSKSRHRPAPKEEGDTASLGKGIAATSHEQIVSDIDDIIASECAYCGELM
IKSIDKPFFDPQKFEQDKSSWL
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcctctattcttgatgagtatgaggactctcagaacatcaggcaaagttctcagcag
cacagccgcctatcctctgccaacatcgggctaacacactcaggctttgtgaatgtcagg
ctggaggaagaaaagccaatattcaacaagcagaggattgactttactccacctgagagg
ataaatcatttggcagtctgcaacaaccagctttgcatgagtctgggaaaggacaccttg
ttaaggattgacttggcaaaaccagatcagcccaatcaaactgaattagggaggaaagat
gacagcaaagtgcacaagctgttcttggatccgacaggctcccatctgctgatcagcttg
agcaccagtgagtgtctgtacctcaacaggaacacacagaaggtgcgcagtctgtcccgc
tggagaggccacttgatcgacagtgtgggctggaacaagctgctgggaaacgacaccagt
actgggcccatcctggttggcaccagtcaagggatcatctttgaagctgagatctctgca
aatgagggcagcctgtttaataccaacccggatcagtacttcagacaggtccattccctg
gaggaggacggcaagccggcaccagtctgctgcttggagatagagcgaggcccagaaaac
aagtacttcatcatcgccaccacccgcaagcgcctcttccagtttgtgggtaaggtggct
gaagggtcggagcagcaaggctttagcaccatcttcaatcagaaccaggacctgctgccc
agtttccaggagttcccagccaacatgggatacagcgagattacattctacacagcaaaa
cttaggaacttccccaaagcgtttgcctggatgatgggtaatggtgtcctgtacggtcag
atggactacgttaggccggattccctgctgagcgacgtccaggtatgggagtacacaccg
gatgttgacattagtcagaacaaacccatttcgattgtgctgacacagttccacttcttg
ctgttgcttcatgaccgaataaaggcaatctgcaccctgaatggacaggtggtgtttgag
gatgtgttcccagataaatttggcccccttaagaggatgatcaaagatccgattggggga
ttggtgtggatctacacggagcgcgcagtttttcgatatcacatccagcgcgaggccagg
gacgtctggcagatgtacatgagcatgaataagtttgatcttgctaaggagtactgccgc
gaccggcctgagtgcatggacatggtgctagctaaagaggctgagtactgcttcctgaat
aggaggtaccttgaaagtgccaagtgctatgcaatgacgcagaactacttcgaagaaata
gcgctcaagttcatcgaagcaaaacaagaagaagcgttgaaggagttcctactgaagaaa
ctgaataatctgaaacagagtgagagaacacaaatcaccttgctggtcacctggctaacc
gaactctacctgaatcgcctggggcagctggagagcgatggcaacagcctcatcttccag
gaaacccgagatgagttccaccagttcttgagcagctccaagcacagggaatgcctattc
aacaaccgtggcaccatttacgacctgctggccagccatggcaacgtggacgacatggtt
tacttctcagtcgtcatgcaggactacgagagggtcatatctcaccactgccagcacgac
aacttcagcgcggctctggatgtgctcgccaagcactgcaatgaaaagctcttctacaag
ttctcgcctgtcctcatgcaacacattcccaagaatgtggtggatgcatggattcagatg
ggcaagaagctggacccgaagaagctaattccggctctgatgaactacagccagatgggc
agcgcccagcagatcaaagagaccatccgctacatggagttctgtgtttatgagctgaac
gtgaccgaggaagccattcataactacctgctgtcgctttatgcaaagtacaagacagac
tctttgttgcaatatctaagacaggcaggtactcacccctcagagatccactatgacctg
aagtatgccctcaggctgtgtgcagagcatggcttccttaaggcctgcgtgttggtttat
agaatcatggaactgcatgaggaggcggtggatctagctttacaagtggacgtagacttg
gccaagtcctgtgcagatctgcctgaggatgatgaggagatgaggaaaaagctttggctg
aagattgccaggcatgtggtgcaggaggagaaggatgtgaagaaagccatgaactgtctg
tccagttgcaacctgctcaagattgaagacatcctgcctttctttccagattttgtcacc
attgaccactttaaggaggcaatctgcagttccctggaggagtacaacaaacacatcgag
gagctgaagcaggaaatggaggaggccacagagagcgctaaacgaatcagggaagacatc
caggaaatgaggaataagtatggtgttgtggattcccaagaaaagtgtgcagcatgtgac
ttcccgttactcaacaggcccttctatttgtttctgtgtggacacatgttccacaacgac
tgcctgtttcaggaagtgaccccccacctgtcaaccttcaagcagaatcgcctagaagag
ctccagaaaaagctggctgccacaacgcagtcctctaaatcccgccaccgtccagcacca
aaggaggaaggcgatacagccagtctgggaaagggcatcgcagcaacaagtcatgagcag
atagtatcagacatcgatgacattattgcgtccgagtgcgcgtactgtggcgaactgatg
atcaaatccattgacaagcctttctttgatccacagaaatttgaacaagacaaatccagc
tggctttga
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