Girardinichthys multiradiatus (darkedged splitfin): 124882110
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Entry
124882110 CDS
T08099
Symbol
lrrc29
Name
(RefSeq) F-box/LRR-repeat protein 4 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124882110 (lrrc29)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
124882110 (lrrc29)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_RPS2
F-box_5
LRR_At1g61320_AtMIF1
LRR_NXF1-5
LRR_8
SAM_Ste50p
Motif
Other DBs
NCBI-GeneID:
124882110
NCBI-ProteinID:
XP_047244244
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Position
2:complement(51207549..51228807)
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AA seq
670 aa
AA seq
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MEHAEMEDSNGEDLKETPELPLEIIVYILSFLHASDRKEASLVCHRWYNASQDLRFQKNL
TFSFPASASSLVLVRGLARMPRCSLKISQLDGFSISRSLLLEVGLCLGSKVDSLALPGSS
ITEASLLTLLPCLTSLRRLDVRGLDSLFMSGAFLSREEHRRQVRSALSGLEELDLSDLRY
LSDLTFNRLTGCTPCLRRLSLAGCHIAFEFDPYRGCPVGAVEDSSALLSLRNLRRLLTEQ
RSTLKALDLSRTSITPESLRSIAQVQDLVLEELHLQGCKELTDYSVEILVKHQPKLLKLD
ISGCTELTSRSVAAVAKSLKSLNHLSLSRDWRITEKGLAELLSIPSLMSLDLSECLHISG
TELVRGLKESNAATPKLEALNLRSCTYLRDLAVFSLAQLLRDSLRELDLTSCVNVTDLSV
CAIATYLQKLEVLRLSWCKEVTDWGLLGMVQTSQCEPDDETGDRGPRFTRTFGNMGFFKP
PQMPFEDRPKLVTQNDLEQFKQSAGASLLALKRLQELDLSACSKLTDSSITQLFECSVSC
PEGMHFPDLQRLSLAMLPEITDASVASVGWHCRSLTSLELSHCPGITDRGLAQAVPHLHR
LQHINLSCCNNITDRTLYLLMQHCRCLKTVDISRCKNISITTVDLLQSQLPFLENVHHKL
IGVADLTLTD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgctgagatggaagacagcaatggagaagatcttaaagaaacacctgagctt
cctctggagattatagtttacatcctgagttttcttcacgcctcagacagaaaggaagcc
tccctggtctgccaccgctggtacaatgccagccaggacctgcgctttcagaagaactta
accttcagtttcccggcctcagcttcatccctggtgctggtcaggggtctggccagaatg
ccccgctgcagcctgaaaatcagccagcttgatggcttcagtatttccagatcactcctt
ctggaggttggtttgtgtctgggctccaaggtggacagcttggctctgcccggcagcagc
ataacagaggcctccctgctgaccctcctgccttgcctgacctcccttcggagacttgac
gtcagaggcctggacagcctcttcatgtctggagccttcctctccagagaggagcacaga
cggcaggtccggtcggctttgagtggtctggaggagctcgatctgtcggacctgcgctac
ctttctgacctcaccttcaaccggctcaccggttgcaccccgtgccttcgccgtctctcg
ttagccggctgccacatcgcctttgagtttgatccgtaccgaggatgcccagtgggagct
gtggaggactcctcggcactgctgtcgctcaggaacctgaggaggttattaacggagcag
agatccaccctcaaagctctggacctcagccggacctccatcacccctgaatctctgcgc
agtatcgcgcaggttcaggatttggtcctagaggagttacatcttcagggctgcaaagag
ctgactgactactcggtggagattctggtgaagcaccagcccaagctcctgaaactggac
atcagcggctgcacggagctgaccagcaggtctgtggcggctgtagctaagagcctgaag
tctctgaaccacctctccttgtctcgagactggaggatcactgaaaaaggcctggctgag
ctgctgtccatcccctccctgatgtctctggatctgtctgagtgtctgcacatcagtggg
acagagttggtgagaggcttgaaggagtcgaatgctgccacaccaaagctggaggcactt
aacctgaggagctgcacgtacctcagggatcttgcagttttctcactcgcgcagcttctc
agggattctctgcgtgagttggatctaacgtcatgcgtcaacgtcaccgacctgtccgta
tgcgccatcgccacctacctgcagaagctggaagttcttcggctcagttggtgtaaggaa
gttacggactggggtctgcttgggatggtgcagacaagccagtgtgagcctgacgatgag
acgggagacagaggtccaaggtttacccggaccttcgggaacatgggcttcttcaagcct
cctcaaatgccctttgaagaccgtcccaagctggtgacacagaacgacttggagcagttc
aaacaaagcgccggagcctcacttttagctctaaaaaggctgcaggagctggacctgtca
gcctgctccaaactcacggacagcagcatcactcagttgtttgaatgttctgtttcctgt
cctgaggggatgcacttcccagacctccagcgtctgtctctcgccatgctgccagaaatc
accgatgccagcgtggcgtctgtaggctggcactgtcgcagcctcaccagcctggagctc
agccactgtcccggcatcactgaccgtggactggcccaggctgtgccccacctccaccga
ctgcagcacatcaacctctcttgttgtaataacatcactgacaggacgttgtaccttctg
atgcagcactgcagatgtctgaaaacggtcgacatctcaaggtgcaaaaacatctccata
acaacggtggacctcctccaatcacagctgccgtttttggaaaatgtccatcataagctc
ataggtgtggctgatcttacactgactgactga
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