Girardinichthys multiradiatus (darkedged splitfin): 124882364
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Entry
124882364 CDS
T08099
Symbol
rev3l
Name
(RefSeq) DNA polymerase zeta catalytic subunit isoform X1
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124882364 (rev3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124882364 (rev3l)
Enzymes [BR:
gmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124882364 (rev3l)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
124882364 (rev3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
POL3_N
REV3_N
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
124882364
NCBI-ProteinID:
XP_047244664
LinkDB
All DBs
Position
15:complement(35054014..35132954)
Genome browser
AA seq
3006 aa
AA seq
DB search
MFAVRIVTADYYLASPIKGLDVCYSEFRESEVKKVPVVRIFGATPAGQKTCLHLHGVFPY
IYVPYDGCGLQPERYMRQVAFSIDRALNVAMGNPAASTQHVFKVVLVSGMPFYGYHAKEK
HFMKIYLYNPKIVKRVCELLQSGAVMNKCYQPHEGHIPYLLQLFMDYNLYGMNLINMGAV
KFRTIHIKEGAAADQQSSSSHPSISPWKVPCTTKLNNSSLAGTFVRWEENALPCSLVLDD
VERQSTCELEVDAVAVDILNRLDIENQIGRNPGLQAIWEDEKQRRREKNQISQIETPDSQ
DRGVVPSTDSEKTFMKRLKEILRENKFDVTQDLFEDDEEESFSAELTLHSDHLTPNGLPC
TAANAVEVHRDSEPDSVRSSGKVPEEAVVDEEAILSLLENSQTFLPPSQTSNHSPLLESS
QDHALIDLLVGLEDDGFHRTPLRQNSQSHSLPGVTTYHCNSDEEEAGPELEKEEAELSMI
MSQQWDSEHHGRTNPPRPGVREAEDCLSDEQHESSDEDMEWSGNHSLFANLSIPQLDGAA
DESSDSSLTDTGSMSQSSLTVTEKLLGKTNPCTGETVHLEPPSSAKILLCKHPELRPVHV
EEQLENPFQLKSSQDNTSECSAGFRVKKEIPYILPVKHPIPRKVANHSEVSPICMDNEDI
RPLYAYNKKTSKPVDKGDLEGFTFGSGKVSKNGKRFSSLETVEANRLSIFQNHSTISLCY
SDLRTCSAKKELELSTKERKSPILRSVTSTPSLIKDSDFIDHKEEMAQQSEEGDVGELKI
RYEDYQENKTEKTIVAQQEAHYKFFPSVILSNCLNRKKTGNKKPADTCNKPELPQPCKLK
LKLPKKRLGMAGHRNKAAVAQSPTSDLSSVTSASYQTADTEEPVSEDQPKLTEINKDEPN
KEVEPVINEELDCEKKTVNEQTEPVLVAGVSSSAIVSSLCEEAKDATRESLSLDSDLSAK
VSCTQPSALPGSKYALRTKRKMNFDGDKEDCPGSTRYKNPSKVPRGQETKYQKRHKKEPP
IIIKYIIINRFKGQKNMLVKMSKVNAEEQLVVLTPDKMEHYNKLAPLKNFWPKVAESPAV
RFPVKEPKAKKSPKRKVRVNTMSKKMFNSSPKKPLIKRGKRTKRTAGCQRRPVLPSLPPP
QPCYCELADDLDKDYADVMVELGYLSDRSSSPTESTPPRCWSPSDPFLNSSEQLMNPLSD
PCLSSASQKPSVTKRAQSRRRTNKPKRSTDSKGKISKSASKPLEEQEPKKEKSKKSVAVI
PRQRKKAKDATESPAASPLPRRSRKKKTDKPKRDDLCKEDSQLLFSDSRSAPSESSSQDV
PLFQQPIGTNNTSQSMLSALVTLMPASTRFIEPKAEDSETSILEVNQSMLAPVEMKQQGC
QTTGLKAESYPEECTAPQPPAVVQPFLENSKDAQKDKSSSPSAPKNGEIPVFPETSGLAV
LKQLLQKRQQGQALPLQVVGTDRHAAALAQAAVLLSPSAKHTKSIRTPSTAPRKARVPKS
TTPKEKKPRNKKSRMSSTQPNLSVKQDGSVSDDCLLFSSAPSLESYNFIEDSLSPELPQA
YTFDINTIHQAEFSSPYSGNQFVLTDKNLPVKFLSDICQETPSAQTQGLEDLPQAHTERG
SDMCEARRASPELFDRSGNGEPTTNLMLDDSEKQRAERQREWDLSFCKSHILSPFQDFHC
ERKEFLFSAFDPVIPLSLSSVSFVDQEGSPTSELLESIDGLTSNTPSSSPHSISSLSQVR
ASQHQRGAGGGAHILKPLMSPPSREEILSTLMDLEMSEATFQDPFCSDPSDIPSKPMEVG
GRKLTVGTRLVKELKEFGGDLSLEGLHFWKTAFSVMTHPIATITSPQGAEALETKEEKTE
LSASSAGDKVILLPCRNPPSRERVQLWLEARKQYDILEKDKRETGKERDKADVEQETPDR
TEPPVVSRCPSVNKEHCGNISSMRTQRRKKLNLSLVLSPLMNSGCQSKSTEVSPVSDESS
EGLEPEEKEDDDSFKTVSPESPDLPPWQESHQLSPSAPDRLSNRKPCENSPEPLSPRLSN
SQERLGGDTSPSPFHGIHRDGESNSSHYLHSTPFLRKRRRSTEDLDPVCSTPLSDKDPVS
PRLQQRRRSQADPLRRVLLTTQMKNQFAAINVPKKEQSQIEGPSIANSYGFKVSMQNLQD
AKALHEVQHLTLMGMELHARSRRDLEPDPEFDPICALFYCFSSDAPLQGADSTQLTGAIM
VDKDYESCGQGRRATAPLLVRSGVSGLQVIYASDEKMLFQEIITIMRRFDPDILLGYEVQ
MHSWGYLLQRAAALGVDLCQQLSRIPGDSKENRFAAERDEYGADTMTEINIIGRVTLNLW
RVMKSEVTLNNYSFENVAFHVLHQRFPLYSPRSLSDWFDHITDLYRWKMVDHYVSRLHGT
MQLLQQQDIIGRTSELARLFGIQFLHVLTRGSQYRVESMMLRVAKPLNYIPVTPSMQQRA
QQRAPQCIPLVMEPESRFYSNSVVVLDFQSLYPSIVIAYNYCFSTCLGHVDSLGTPDEFK
FGCTSLRVPPELLHQLRNDITVSPSGIAFVKSSVRKGVLPSMLEEILNTRIMVKQSMKNY
KQDKALMRLLHARQLGLKLIANVTFGYTSANYSGRMPSVEVGDSIVHKARETLERAIKLV
NDTKKWGARVVYGDTDSMFVLLKGATKEQAFKIGQEIAEAVTATNPKPVKLKFEKVYLPC
VLQTKKRYVGYMYESLDQKEPTFDAKGIETVRRDGCPAVSKILERSIKLLFETRDISQVK
QFVQRQCVKVLDGRASMQDLIFAKEYRGSGSYRPGSCVPALELTRRMMGYDRRLEPRVGE
RVPYVIVYGMPGVPLIQLVRRPIEVLQDPSLRLNATYYITKQILPPLGRLFQLIGVDVFS
WYQELPRIQKASCTSGVGGEEPTGRKGTISQYFTTLHCPVCDELTQLGVCSRCRADPQRV
AVTLYQDMRQWDSQQEQLLKICRNCSGCAERQVPCVSLDCPVLYQLSRVNRQLSKAPYLR
QLLEQF
NT seq
9021 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgtgcgaatagtcaccgcagactattacctcgcaagtcccattaaaggcctg
gacgtgtgttattctgaattcagggagagtgaggtgaagaaggtaccagtggtgcggata
tttggagcaacgccagcaggtcagaagacatgtctccacctccacggtgtgttcccatac
atctatgtgccatatgatggctgtggactgcagccagagcgctacatgcggcaggtggcc
ttcagcatcgacagggccctcaacgttgccatgggaaaccccgccgccagcacccaacac
gtctttaaggtggttctggtctctggcatgcctttctatggttatcatgccaaggagaag
cactttatgaagatctacttgtacaatcctaagatagtgaaaagagtgtgcgagctttta
caaagtggagcagtgatgaacaagtgttatcagcctcatgagggccacatcccctacctg
ctgcagctcttcatggattataacctgtatggcatgaacctgataaacatgggagctgtg
aagttccgcacaatccatatcaaagaaggagccgctgcagaccaacaatcttccagctct
catcctagcatcagtccctggaaggtcccctgtaccactaagctgaacaacagcagcctt
gcaggcacctttgtccgctgggaagagaacgctctaccctgctctttagtcctggacgat
gttgagagacagagcacctgtgagctggaggtggatgctgtggccgtagacatccttaac
cgccttgatattgaaaatcagattggcaggaaccctggactacaggctatttgggaggat
gagaagcagaggaggagagagaaaaaccagatctcccagatagaaacccctgattcacaa
gatcgtggcgtggtcccttcaacggacagtgagaaaaccttcatgaagagactaaaagag
attctgagggagaacaagtttgacgtcacacaagatttgtttgaagacgatgaagaggag
agtttctcagccgaactcactctgcattctgaccacctgacccccaacgggctgccatgc
actgcggctaatgctgtggaggtgcacagggactctgaaccagactcagtgaggagcagt
gggaaagtcccagaagaggctgttgttgatgaagaggcaatcctaagtcttctggaaaac
agtcagacttttctgccaccctctcagacgtccaaccattcacccctgttagaaagcagt
caagatcatgccctcattgatttgctggtaggcctggaagatgatggtttccacaggacc
ccactaaggcagaactctcagtctcattctctccctggtgtaacaacctaccactgtaac
agtgatgaagaagaagctggaccagagctagaaaaagaagaagcagagctcagtatgatc
atgtcacagcagtgggacagcgaacaccatgggagaacaaacccaccaaggcctggagtt
agggaggcagaggactgcttgagtgatgagcagcacgagtcctctgatgaagacatggag
tggagtgggaatcactctttgtttgccaacctgtccatcccacagctggatggggcagca
gacgaaagcagcgattcttccttaacagacactggctccatgtctcagtcttcacttaca
gtcacagagaagctgttggggaaaacaaatccgtgcacaggagagactgtccacctggag
cccccttcgtcggctaagatcctgctgtgcaagcatcctgagctcaggccagttcacgtg
gaggaacaacttgaaaacccctttcaattaaaaagcagtcaggacaacactagtgaatgt
tcagctgggtttagggttaaaaaagaaatcccatacatcttgccagtaaaacacccgatt
cctcgcaaagtagccaatcactctgaggtgtctcctatttgcatggacaatgaggacatc
cgaccattgtacgcatataacaaaaaaacctccaaacctgtggataagggtgatctcgaa
ggtttcacttttggtagtggaaaggtgtcaaaaaacgggaaaaggttcagcagcctagag
actgtagaagctaaccggttgtccatttttcagaaccacagtaccatctccctttgttac
tctgacctcagaacctgctctgccaagaaagagctggaattgagcactaaggagagaaaa
agcccaatcctgaggagtgtcacctcaaccccatctctcataaaggacagcgatttcatc
gatcacaaagaggagatggcccagcaaagtgaggaaggagatgttggggaactcaaaatc
agatatgaagactaccaagaaaataaaactgagaaaactattgtggcccagcaggaggcc
cattacaagttcttccccagtgtcattctctctaactgtctcaatagaaagaaaacaggt
aataaaaagccggctgacacatgcaataaaccagagctgccccagccttgcaagttaaag
ctaaaacttcctaaaaaaaggttaggaatggcaggacataggaacaaagcagcagtggct
caaagcccgacctccgacctttcttcagtaacatctgcaagttaccagactgcagataca
gaggagccagtttcagaggatcaaccaaaactgactgagataaataaagatgagccaaat
aaagaagttgagccagtcataaacgaggagttggactgtgagaaaaagactgtcaatgag
cagacagaaccggtcttagtggctggtgtctccagttctgccattgtttcctctctttgt
gaagaagccaaagacgcaacacgggaaagtctgagccttgattcagatttatccgccaaa
gttagctgtactcaaccatcagcactgccagggagtaaatacgcattgaggactaaacgg
aaaatgaactttgatggtgataaggaagactgtccaggttccactcgttataaaaaccca
agcaaggttcccagggggcaggagaccaaataccagaagagacacaagaaagaacctccc
ataattatcaagtacattataatcaacaggttcaaaggacagaaaaacatgttggtgaag
atgtccaaagtgaatgcggaggaacagttggttgtgttgactcctgataaaatggagcat
tacaataagctggcccctctcaagaatttctggcctaaagtggcagagtcccctgctgtc
aggtttcccgtcaaagaacccaaagccaaaaaatcgcccaaacgaaaagttagagtcaac
actatgagtaagaaaatgtttaacagctctcccaaaaagcctctaatcaaacgaggtaaa
agaactaaaaggactgcaggctgtcagaggcgcccagttctgccctctctgcctcctcct
cagccatgttactgtgagctagcagatgaccttgacaaagactatgctgatgtcatggta
gaactgggctatctttctgacagatcctcaagccccacagaatcaacacccccacggtgt
tggtccccaagtgacccttttctgaacagttcagaacagctgatgaatccacttagtgac
ccttgtcttagttctgcttctcaaaagccatctgtgactaaaagagcccaaagtagaaga
cgaacaaacaaacctaagaggtccacagactctaaaggaaaaataagcaagtctgcttct
aagcccttggaggaacaagagcccaaaaaggagaaatcaaaaaaaagtgttgctgttatt
ccaaggcagagaaagaaagctaaagatgcaactgaaagtcctgcagcatctccactaccc
agaaggtcccggaaaaagaaaactgacaaacctaaaagggatgatttatgcaaagaagac
tcccagctcttattctctgatagcaggtctgctccatcagagagttcctctcaggatgtt
cctctgtttcagcagccaataggcaccaataacaccagccagagcatgttgtcagctttg
gtgacattgatgcctgcttcaacccggtttattgaaccgaaggctgaggactctgagacc
tcaatcttggaagttaaccaaagcatgttggcacctgttgagatgaagcagcagggttgt
cagaccactggtctaaaagcagaatcttatccagaagagtgcactgctcctcagcctcct
gcagttgttcagccatttctggaaaactctaaagatgcacagaaagacaaaagttcctcc
ccctcagctcctaaaaacggagagatacctgttttcccagagacctccggcttagctgtc
cttaagcagctcctccagaagaggcagcagggacaggcccttcctctacaagtggttggg
acagacagacatgcagctgccctcgctcaggctgcagtgctactaagcccatcagctaaa
catacaaaatccataagaacaccttccacagctccacgtaaagcccgggtcccaaagtcg
accactcccaaagagaaaaagcccagaaacaagaaaagcaggatgagcagcactcagcca
aacctatcagtgaagcaggacggcagtgtgtctgatgactgccttctcttctcctctgcc
ccgagcctcgaaagctacaacttcatagaggacagcttgtcaccagagctcccacaggcc
tacaccttcgatataaacactattcatcaggcagagttctccagtccatacagtggcaat
cagtttgttttgactgataaaaacttgcctgtcaagttcctcagtgatatctgtcaggaa
actccatctgcacagacacagggcttagaagatcttccccaggcccatactgagagaggt
tctgacatgtgcgaagccaggcgtgccagtcctgaactttttgacagatctgggaatggg
gagccgacgacaaacctcatgttggatgattctgagaagcaaagagcagaaagacaaaga
gagtgggacctctctttctgtaaatcccacatcctcagccctttccaagactttcactgt
gagagaaaagagtttctcttctccgcctttgaccctgtcatacctttgtctctaagctca
gtgtcgttcgtcgaccaggagggctcaccaacaagcgaacttctggagagcattgatgga
cttacatccaacacacccagcagctctcctcactccatcagttcgctgtcacaggtgagg
gcaagccagcatcagcggggggctggaggtggagcccatatcctcaagccactcatgtcc
cccccgagtcgggaggagatcctcagcactctgatggacctggagatgtcggaagccact
ttccaggaccccttctgcagcgatccctctgacatcccaagcaagcctatggaagtcggg
ggccgtaagctcacagttggaaccagattagtgaaggagctcaaagaatttggaggagac
ctgtctttggagggccttcatttttggaagactgccttctcggtcatgacacaccccatt
gccaccatcacctcacctcagggagcagaggccttggagacaaaagaagaaaagactgag
ctttccgcatcctcagccggcgacaaggtcatccttctcccctgcagaaacccaccgagc
cgtgaacgtgtgcagctgtggctggaagccaggaaacaatatgacatcctggagaaagac
aagagagagacggggaaggagagggataaggctgatgtggagcaggagacccctgacaga
actgagccgccagttgtttccagatgcccctcagttaataaggaacattgtgggaacatt
tccagcatgagaactcaaaggagaaagaaactcaacctctctttagtcctttctcctcta
atgaattcaggctgtcagtctaaatctacagaagtgagtccagtttctgatgagagcagt
gagggccttgagcctgaggaaaaagaggatgatgattcttttaaaacagtttctccagaa
tccccagacctgcctccatggcaggaatctcatcagctgagcccatcagcacctgaccgt
ctcagcaacaggaagccatgtgaaaactcaccagaaccactgtcacccaggctctctaat
tcacaggagaggcttggaggggacacatccccatctcctttccatggcattcacagggat
ggtgagagcaacagttcacactacctacacagcacccctttcttaaggaaaaggcggagg
agcacagaagatctggatccagtgtgcagcacacccttaagtgacaaagatcctgtttct
ccgagactccagcagagaagaagaagccaggctgatcctttgagaagagtattacttacc
acacaaatgaagaaccagtttgctgctataaatgtgccaaagaaagaacagtcccagatt
gaagggcccagtatagccaactcatatggcttcaaagttagcatgcagaatctgcaggat
gccaaagctctgcatgaggtccagcacctaacgttaatgggaatggagctccacgcaaga
agccgccgtgacctggaacctgacccagagtttgaccccatttgtgccttattctactgc
ttcagttctgatgcacccctgcaaggagcagacagcactcagctgacaggtgccatcatg
gtggacaaagactatgaaagttgtggccaaggtcgcagagcaacagcaccactgctagtc
aggtcaggagtctctgggctacaagtcatctatgccagtgacgagaagatgctgtttcag
gaaatcatcaccatcatgagaaggtttgacccagacatcctactgggctacgaggttcag
atgcattcatggggctaccttcttcagcgtgccgctgcacttggtgtggacctttgccag
cagctgtcccgcatcccaggtgactccaaggagaaccgctttgctgctgagagggacgag
tacggcgctgacaccatgactgagatcaacatcatcgggcgcgtcaccctcaacctgtgg
agggtgatgaagagtgaggtgacgttgaacaactacagctttgagaacgtggccttccat
gtgctccaccagcgcttccctctctacagcccccgctcgctgtctgactggtttgaccac
atcacagacctatacaggtggaagatggtggatcattatgtgagtcgtttacacggcacc
atgcagctcctgcagcaacaagatatcatcggcagaaccagcgagctggcccgactcttt
ggaattcagttcctccatgtcttgactcgagggtcccagtatcgcgttgagtccatgatg
cttcgtgtggcaaagcccctgaactacatccctgtgacgcccagcatgcagcagcgagcc
cagcagagggcgccacagtgtatccctttggtgatggagccggagtcgcgcttttacagc
aactctgtggtggtgctggatttccagtcgctgtatccgtccatcgtcatcgcatacaac
tactgcttctccacatgcctcggccatgtggacagcctgggaacgccggatgagtttaag
tttggctgcacatctctgcgggttcctccggagctcctccaccagctccgtaatgacatc
accgtgtccccaagcggcattgccttcgtcaagtcgtcagtgcgtaaaggcgttctgccc
agcatgctggaggagatcctcaacacgaggatcatggtgaagcagtccatgaaaaactac
aaacaggacaaggctctgatgaggctgctgcatgcccggcagctcggactcaagctcatc
gccaacgtcaccttcggctacacctcagcaaactactccggacgcatgcccagcgtggag
gtgggagacagcattgtccacaaagccagggagaccctggaaagagccatcaagctggtc
aatgacactaagaagtggggagcacgtgttgtgtatggagacacagacagcatgtttgtt
ctgctgaaaggagccaccaaggagcaggccttcaagatcggccaggagatcgccgaggct
gtgactgcaaccaaccccaaacctgtcaagctcaagtttgaaaaggtgtatctcccctgc
gtgctgcagacaaagaagcgctacgtgggctacatgtacgagagccttgaccaaaaagag
ccaacgtttgatgccaaagggatagaaacagtgcgccgtgatggatgccccgctgtttcc
aagattctagagcgctccattaagctgctgtttgagacgcgggacatcagtcaggtgaag
cagtttgttcagcgtcagtgtgtaaaggttctggacggccgggctagcatgcaggacctg
atctttgccaaggagtaccgaggcagtgggtcataccggcccggatcctgcgtgcctgcc
ctggagctcaccaggcgtatgatggggtatgatcgtcgactggagccacgtgtgggcgag
agagtcccctatgtgatcgtttacgggatgcctggtgtgcccctcatccagctggtgcgc
cggcccattgaggtgctgcaggaccccagcttgcgcctcaacgccacctactacatcacc
aagcagatcctgccgccactgggccgcttgttccagctgattggagtggatgtcttcagc
tggtaccaggagctgcccaggatccagaaagcttcctgcacctctggagtgggtggggag
gagcccactgggaggaagggaactatttcccagtatttcaccacacttcactgccccgtc
tgtgacgaactgacccagctgggggtgtgctcgcggtgcagagccgacccccagcgagtg
gccgtgaccctgtaccaggacatgaggcagtgggatagtcagcaggagcagctgctcaag
atctgcaggaactgcagcggctgtgctgaacggcaggtgccctgtgtgtccctggactgt
cccgtcctctaccagctgtcccgggtcaacaggcagctttctaaggccccctacctcaga
cagctgctggagcagttctga
DBGET
integrated database retrieval system
