Girardinichthys multiradiatus (darkedged splitfin): 124882399
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Entry
124882399 CDS
T08099
Symbol
hnrnpub
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Ub isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124882399 (hnrnpub)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmu03041
]
124882399 (hnrnpub)
Spliceosome [BR:
gmu03041
]
Common components
Common spliceosomal components
hnRNP proteins
124882399 (hnrnpub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
CPT
AAA_22
AAA_18
Zeta_toxin
AAA
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
124882399
NCBI-ProteinID:
XP_047244710
LinkDB
All DBs
Position
15:complement(31314596..31328146)
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AA seq
808 aa
AA seq
DB search
MSTINVKKLKVNELKDELKKRNLSDKGLKAELMDRLQAALDEEALAGDSSAAQEGSGDDG
FDQSADPEGMAEEEEGDGPIEENMEANEEEAENEGQGEGDGNGVAEDEEMGEGEDGGDED
DEMDPLLKADVDDMEKIEDGEPGDHAAEGDADKDTNADQKNKKGVKRRREEHGRGYFEFI
EENKYSCASFKSPVPPLEEEDEECDDTKVCLDTYNCDLHFKVSRDRYSASSLIMESFAYL
WSGGKGTYGVNQGKACFEMKLTEKISVKHISSKNLEIHDAQVGWSLSTGTLLLGEEEFSY
GYSCKGKKTTNCVTEDFGETFEENDVICCLIDFEGEEVVLSFSKNGGEPAVAFRVYKESL
NGQALFPHVICRNCAVEFNFGQMETPYFPQPQGYTFLQQFPVSDRVRGLKGPQTKADCEI
IVMVGLPGSGKTTWVKNQVQQNPGKYYILSSDTIVDKMMINSLKRQSKDITKLSAISQRA
PLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVFPTDEEYKKRVQK
KVESDGKEVPEHALLKMKGFYALPEEGESFSEVIYAELPKDDASKLLEQYKEESKTALPA
EKKPNQGSTTPKRGGSGSGPRGGGRGGKNQFGRSGQGQRGGGRGGFQNRGNFRGGPAPRG
GFNRPPRGFLPPPAFRGGFPRPGNFGRGGGGPIPSLGGSPRGGPMRGNMGHRGGPMNRGG
QMNRGGQMNRGGGGNMNRHANRGPPTHFQQRGGGRGNFGQKNSNYGNRNSGNFGNRNGMD
KAQAFNQSWQQGLWNQKPWSQQYQPGYY
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccataaacgtgaagaagctcaaagttaacgagctgaaggacgagctgaaaaag
cggaatctttcggacaaggggctgaaggccgagctgatggatcgcctgcaggccgcgctg
gacgaagaggccctcgccggagattcctcggccgctcaagaaggttcgggagatgatggg
ttcgaccagtcggctgacccagaaggtatggcagaggaagaggaaggcgacggcccaata
gaggagaacatggaggccaacgaggaagaagctgagaatgagggtcagggcgagggcgac
ggcaacggcgttgccgaggacgaagaaatgggtgaaggggaagacggaggggacgaggac
gacgaaatggatcccctgctcaaggcggatgtcgacgacatggaaaaaatcgaagacggt
gagcccggagaccacgctgcagagggggatgcggacaaagacacgaatgctgatcagaag
aataagaagggtgttaagagacgccgggaggaacatggaaggggctactttgaatttatt
gaagagaacaaatacagctgcgcctcttttaagtctcctgtaccccccttggaggaagaa
gatgaagagtgtgatgacacaaaagtctgcttggatacctacaactgtgacctgcacttt
aaggtgtcacgagaccgttacagcgcttcatccctcataatggagagctttgcttatctg
tggtctggaggaaaggggacctatggtgtgaaccaaggcaaagcttgctttgagatgaag
ctcacagagaagatttcagtcaagcacatttccagcaagaacctagaaattcacgatgcg
caggtcggatggtccttgtcaactggcacattgctactgggtgaggaggagttttcctat
ggctactcctgtaaaggcaagaagaccaccaactgtgtgactgaagactttggagaaacc
tttgaggagaatgatgtcatctgctgcctcattgacttcgagggtgaggaggttgttctg
tccttctccaagaatggtggggaaccagctgtcgctttcagggtctacaaggaaagttta
aatggccaggcccttttcccacacgtcatctgtcgcaactgtgccgtggaatttaacttc
ggccagatggagactccatacttccctcagccccagggctacacctttctgcagcaattc
cctgtcagtgaccgcgtgaggggactgaagggaccccagactaaggctgactgcgagatc
atcgtgatggttggtttgcctggctcagggaaaacgacatgggtgaagaaccaagtccag
cagaaccctgggaagtactacatcctgagcagcgacactattgtggataagatgatgatc
aacagtttgaaacgccagtccaaggatatcaccaaactgagcgccatttcccaaagagct
ccacttttcttgggtaaattcattgagattgctgctcgcaagaagaggaactacattttg
gatcacaccaacttgtccgcaccaggccagaagaggaagatgtgtttgtttgcaggcttc
cagcgtaaggctgtggtagtcttccccacagatgaggaatacaagaagagagtccagaag
aaggttgagagtgatggcaaggaagtgcctgagcacgctttgctcaaaatgaagggcttc
tatgccctgcctgaggaaggagaaagcttcagcgaggtcatatatgctgagctgccgaag
gatgacgcctccaagctgctggagcagtacaaagaagaaagcaagacggccctgcctgct
gagaagaaacccaaccaggggagcacgactcctaaaagaggcggcagtggcagcggtcct
cgtggtggtggccggggaggcaagaatcagtttgggcgcagtggacagggtcagagaggt
ggtggtcgtggaggcttccagaacagaggcaactttagaggaggtcctgcccctcgcggt
ggctttaatcgtcctcctcgtggctttctacctccaccggccttcaggggagggttcccc
cggcctggaaactttggcaggggcggcggtggcccgatccccagtctgggtggatcccca
agaggaggaccaatgaggggtaatatgggtcacagaggaggacctatgaacagaggtggc
cagatgaacagaggtggtcagatgaacagaggaggtgggggcaacatgaaccgtcatgca
aacaggggacctcccacccatttccagcaaagaggaggcggccgtggaaactttggccag
aagaacagtaactatggtaacaggaacagcgggaactttggcaacagaaacggcatggac
aaggctcaagcctttaaccagagctggcagcaagggctctggaaccagaaaccttggagc
cagcagtatcagcctggatattactga
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