Girardinichthys multiradiatus (darkedged splitfin): 124882990
Help
Entry
124882990 CDS
T08099
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmu03000
]
124882990 (sox5)
Transcription factors [BR:
gmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124882990 (sox5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
OVT1
MPS2
Motif
Other DBs
NCBI-GeneID:
124882990
NCBI-ProteinID:
XP_047245714
LinkDB
All DBs
Position
17:9331461..9435687
Genome browser
AA seq
733 aa
AA seq
DB search
MLLLSRETDPYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMATSRQRVEDEESEGL
GGVIHLPLASYCGKVSPRSPPSRHLDSPPSTEHDGIKGSSLSPYPQHNATSPGKEEGGGG
GRLSSDSSLATGTLGTPERRKGSLADVVDTLKQRKMEELIKNEPEEAPSIERLLSKDWKD
KLLAMGSGHIGEIKGTPDSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQR
QQMELAKQQQDQIARQQQQLLQQQHKINLLQQQIQVRPGCVCVQQVQGQLPPLMIPVFPP
DQRTLAAAAAQQGFLMPPGFNYKPGCSDPYPLQLIPTTMAAAAAATPGLGPLQLQQLYAA
QLAAMQVSPGTKQHGGSLAPQANLGAHSPPTNSHPQGEKNRSSPPSNKNKDSEGAQPLNL
SAKPKASESKSPNSPPTSPQVHAAAAATTKLGPTGSMKHSAVPSSIGAPPTRVSSIADLL
SSLSSTAYLSDHEAVSKAFAEARQIKEQLKGEQQALDAKLASVSNLSLNNGRSDKDKAAL
ESLSQQLKQQADDKFSHAMLDFTMSGDSDGSPSVSDSRIFRETRGRNNNEPHIKRPMNAF
MVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDY
KYKPRPKRTCLVDGKKLRIGSKASCPYPLQAWSTQAPCPWRECPRPRCPRSTRACPAAPN
PTPTTTKTPTCQD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttgtcgagagagacggacccttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagaggtaaccatggcaaccagcagacagagagtggaggacgaggagagcgagggactg
ggcggtgtcatccacctccccctggcctcctactgtggaaaggtgtcccctcgctcgccc
cccagccgccacttggacagcccccccagcacggagcatgatggaatcaaggggagctca
ctgagtccttacccacagcacaatgctacctcaccaggcaaagaggagggcggaggtggg
gggcgactaagcagcgacagcagcttggcaaccggcaccctcgggacccctgagagacgc
aagggcagcctggctgatgttgtggacacactgaaacaacgcaagatggaggaactgatc
aaaaatgagccagaagaggcccccagcattgagaggctgttgtcaaaggactggaaggat
aaacttttggccatgggttcagggcacatcggagaaattaaaggtacaccagacagcctg
gcggagaaagagcgccaactcatgggcatgattggccagttgagcagcctgagggagcag
cttctggcggcacatgaggagcagaagaagctggccgcatcacaaatggagaagcagagg
cagcaaatggagctggccaagcagcagcaggaccagattgcccggcaacagcagcagctc
ctgcagcagcaacacaaaatcaacctcctgcagcaacaaatccaggtgaggcctggttgt
gtctgtgtccaacaggtccagggccaactccctccactgatgattccagtgtttcctcct
gaccaacggaccctggcggctgccgcagcccagcagggctttctaatgcccccaggcttc
aactataagcctggctgcagtgacccctaccctctccagctcatccccacgacaatggcc
gctgctgctgccgccacacccggtctgggacccctgcagctacaacagttgtatgcagct
cagctggcagccatgcaggtttccccagggacgaagcagcacggtggcagcctcgcaccc
caagccaacctgggtgcacactccccacccaccaactcacatccacagggcgaaaagaac
cgcagctccccaccttcaaacaaaaacaaggacagtgagggtgcacagccactgaacctg
tcggccaagcctaaggcatccgagagcaagtcacccaactcccccccaacttccccacag
gttcacgctgctgctgctgccaccaccaagctgggtcccactggctccatgaagcacagt
gcagtgccctccagcatcggagcgccgccaaccagagtcagctcaatagcagacttgttg
tcttcgctgtcttcaacagcttacctgagcgatcatgaggcggtgagcaaggccttcgcc
gaggcccggcagataaaggagcagctgaagggggagcagcaggccctcgacgccaagctg
gcttccgtcagcaacctcagcctcaataatggccgctcagacaaggacaaagctgccttg
gagagtctgagtcagcagctgaagcagcaggccgacgacaagttcagccacgccatgctg
gacttcactatgagtggagactcagatgggtcccccagcgtgtcagactccagaatattt
cgggaaactcgtggcaggaacaacaacgaaccgcacattaaacggccgatgaatgccttc
atggtctgggccaaggatgagaggcggaagatcctccaggccttcccagacatgcacaac
tccaacatcagcaagatcctcggctcaaggtggaaagccatgaccaacctggagaagcag
ccgtactacgaggagcaggcccgcctcagcaagcagcatctggagaaatacccggactac
aagtacaagccgcggcccaaacgcacctgcctggtggacggcaagaagctgcgcatcggc
agcaaggccagctgcccttatcctctgcaggcatggtctacccaggcaccctgtccatgg
cgggaatgccctcgccccagatgccctcggagcactcgagcatgtccagcagccccgaac
ccaacgccaaccaccaccaaaacccccacatgccaggactga
DBGET
integrated database retrieval system
