Girardinichthys multiradiatus (darkedged splitfin): 124883086
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Entry
124883086 CDS
T08099
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04510
Focal adhesion
gmu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124883086 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124883086 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
LAMB1
Alanine_zipper
Lipase_GDSL
DUF3887
Motif
Other DBs
NCBI-GeneID:
124883086
NCBI-ProteinID:
XP_047245942
LinkDB
All DBs
Position
17:22018395..22047571
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AA seq
1776 aa
AA seq
DB search
MWVNIFTLTALALWYPVRAQEAPSADMCTEGSCYPATGDLLIGRAHKLIASSTCGLQQPE
RFCIVGHLEEEKKCFTCDSREMYDEDSNSISHTIENVVTTFAPNRLKTWWQSEKGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMMIERSMDFGNTWQVYRYFAHDCESAFPGITTGPM
HKVDDIICDSRYSDIEPSTEGEVIFRVLDPAFKIEDPYSMRIQNMLKITNLRVKFIKLHT
LGDNLLDSSGEVTEKYYYALFDMVVRGNCFCYGHASECAPIDRKLAGAEGMVHGRCVCNH
NTEGLNCERCQDFYHDLPWRPAEGRNTHSCKRCECNQHSTSCHFDLAVYISTGNVSGGVC
EDCQHNTVGRQCEQCAPLFYQHPNRDLRNSNICEPCNCDPEGSLRGGLCDSRTDVAAGLI
SGQCRCKLNVEGERCDHCRQGHYGLGQGPDGCLPCTCNALGTMPGGHPCDSGTGRCFCKR
LVTGQNCNECLPEHWGLSNDMDGCRPCDCDQGGAVNNNCDPHSGQCVCREHMFGRRCDQV
ESGFYFIALDHYTYEAEEAQHGPGVTFLARAYPQDRSPTWTGMGFAHVPEGGYIEFNVNN
IPESMDYDILIRYEPQLPKQWEQVTFRVERPVFNPPSYIAHCSDSIQSGDEQSISLPPGS
RHVLLVSPVCLEKGLNYTIHLTFPLYSSDSYIQNPHTLIDSLVLMPRVREMEMFHGTDGT
EAWDTFQRYRCLESSRSVIKSPMTDICNDYIFSVSALLHKGAMTCHCDPQGSISTVCEPS
GGQCRCRPNVVGRNCDHCAPATFLFTPAGCRSCDCDPLGSVTPFCHESTGQCECVAGATG
RQCSHCLPGYWGFPQCRPCQCNGHSKYCHPQSGECQGCRDFTTGHHCERCINGYHGDPEL
GSGGHCRRCMCPDGPRSGRQFADSCYLLTNQLVCVCSHGYKGTRCDECAPGYYGNPLIPG
GRCTPCDCNNNIDMHNPGSCDVRTGACLKCLYHTEGHSCQHCKPGYYGNAATQSCRKCMC
NSMGSAPYVCSSRDDCQCDQRSGQCPCQPNVVGQNCDQCAPNTWNIAGGTGCQHCDCDPV
HSVRSSCDEVTGQCVCKPGFGGRTCRECKELFWGDPEVKCHACDCDSRGISSEQCHRATG
QCTCLDRFSGPRCDQCARGYKGEFPTCEPCHQCFSIWDTVVGELTNQTRRLEAQVTELLT
TGVTAPYKELVSSLERNARAVREIVENKTAAENLENVRDLMHQITGLMSFLNGKLNMTKE
NLITAYKNNNTTETSLDALTDEASKLEQYIQELRQQVHNIKNSNIQGAMSTISVAYIESQ
NAEKRSKEATSVPGNTVEESAALRKATEDKLSSSQKEFDRKHQRNAQKLDKLAEELEKFD
LSPLSEKMCGSSAEGESCSSCGGLGCVRENGAPHCGGEDCSGFVTTSQTALKTSQNLDQE
IQQAMEEVDKLSRMVWEANIRAKEAKAKAMEVLISSNRSKEAVEQNNKQLRDLIKEIRDL
LNNEKADASVIEAVANEVLALEMPTSAEKLQELTNEIREKVGTLTSVEEILSQSAEDIQS
AESLLRQAKSASEKASHMKEAADTVKTVLEETERTQSITADAIQLARNNTKETVELLNSV
ESETAQSELKLSNATSRLLELEQELGLLRQNNLEMNQKVETAERVSERAKQIAEEAQKEF
DEDLKDKLEVVEDQVEDKGESVLQARRKADDLQREAKELIAQSSSKLQRLKELENSYETN
QQLLKEKAEALAVLEQTAKRILEEISHKVSLYSSCQ
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcaacatcttcactctaacagctttagctctgtggtatcccgtcagggcacag
gaagcaccgtctgcagatatgtgcacggagggcagctgctaccccgccacgggtgacctg
ttaatcggccgagcgcacaaactcatcgcctcctccacctgcggcctccagcagccagag
cgcttctgcattgtcggccacctggaagaggagaagaaatgcttcacatgtgattcgagg
gagatgtatgatgaggacagcaactccatcagccataccattgagaacgtggtcaccacc
tttgcccccaaccgcctcaagacctggtggcagtctgagaaaggtgtggagaatgtaact
attcagctggacctggaggccgagtttcatttcacacacctcatcatgaccttcaagacg
tttcgtcctgctgccatgatgattgagcgttccatggattttgggaatacatggcaggtt
tatcgatactttgcccacgactgcgagtctgccttccctgggatcaccaccggacccatg
cataaagtagatgacatcatctgtgactcccgctactcggacatcgaaccatccacagag
ggagaggtgatatttcgggtgctggatcctgcctttaagattgaagacccctatagcatg
agaatacagaacatgctgaagatcacaaacctcagagtaaagttcatcaagctccacaca
ctgggtgacaacttgctcgactccagcggggaggtgacggagaagtactactacgccctc
ttcgacatggtggtccgcgggaactgcttctgctacggccacgcctccgagtgtgctcct
atagacagaaaactggccggagctgaaggcatggttcatggccgctgcgtttgcaaccac
aacactgagggactgaactgtgagcgctgtcaagacttttaccatgacctgccttggaga
cctgcagaggggcgaaacacccactcctgcaaaaggtgcgagtgcaatcagcactccaca
tcatgtcacttcgacctcgccgtgtacatttcaactggtaatgtcagtggaggcgtgtgt
gaggactgtcagcacaacacagtgggccgacagtgtgagcagtgtgcacctctcttctac
cagcaccccaacagagacctgagaaactctaacatctgtgaaccatgtaactgtgacccg
gagggatctctgcggggtggattgtgtgactcgcggaccgatgtggctgctgggctgatc
tcaggtcagtgcaggtgcaaactgaacgtggagggggagcgttgtgaccactgcagacag
ggacactatggactgggacaaggcccagatgggtgcctgccttgtacctgcaacgcactg
ggaacaatgccaggaggacacccctgtgattcaggcacaggacgatgcttctgcaaaaga
cttgtcaccggtcaaaactgtaatgagtgcttgccagagcactggggtctgtcaaatgac
atggacggttgcagaccatgtgactgtgaccagggaggagcggtgaacaacaactgtgat
ccccactcagggcagtgtgtgtgccgggagcacatgtttggacgccgctgtgatcaggtg
gaatccggattctacttcattgctttggatcactacacgtatgaagccgaggaggcccaa
catggaccaggagtcacattccttgcgagggcctatcctcaggaccgaagccccacatgg
accggaatgggctttgctcatgtccctgaaggagggtatatagagttcaatgtcaacaac
atacctgagtcaatggattatgacattcttattcgctacgagccacagctgccgaagcag
tgggagcaggtgacctttcgagtggagcgccccgtcttcaaccctccaagctacattgct
cactgcagcgactccatccagagtggagatgagcagtcgatctctctcccacctggatcc
aggcacgtgctgctagtgagtccggtgtgtttagagaaagggctaaactacacgatccat
ctgactttcccgctgtactcatcggacagctacatccagaatccacacacgctcattgac
tctctggtgttgatgccccgggtcagagagatggaaatgtttcatgggacagatggtacg
gaagcgtgggatacgttccagcgctacagatgtttggaaagcagccggagcgtcatcaaa
agcccgatgacggacatctgcaatgactacatcttcagcgtctctgccctgctgcacaaa
ggagccatgacttgccactgcgatcctcagggttctatcagcactgtgtgcgaaccaagc
ggtggtcagtgtcgatgtcgacccaacgtggttggtagaaactgtgaccactgtgctccg
gctacattcctgttcactcctgctggctgcagatcttgtgactgcgaccccctgggctct
gtcactcctttctgtcacgaatcaaccggtcagtgtgagtgcgtagctggagccaccgga
cgccagtgttcccactgcttgccaggttattgggggttccctcagtgccgaccgtgccaa
tgtaacggccacagcaagtattgtcaccctcagagtggagagtgtcagggttgcagagac
ttcaccaccggacatcactgtgagaggtgtataaatggttaccatggtgacccagagcta
ggatcagggggccactgtcgtcgctgcatgtgtccagacgggcctcgcagtggtcggcag
tttgcggacagctgttaccttttaaccaatcagctggtgtgtgtgtgcagccatggctac
aaaggaaccaggtgtgatgagtgcgccccaggttattatggaaaccctctcattcccgga
ggccgctgcacgccctgtgattgtaacaacaacatcgacatgcacaacccgggatcctgc
gacgtccgcaccggcgcctgtctcaaatgtctgtatcacacggagggccactcatgccag
cactgcaaaccgggatattacggcaatgccgcaacacagagctgccggaagtgcatgtgt
aactcgatggggtcggcaccttacgtctgttcatcccgtgatgactgccagtgtgaccag
cgtagcggtcagtgtccctgccagccgaatgtggtcggacagaactgtgaccagtgcgct
cccaatacatggaacatcgccggtgggacgggctgccaacactgtgactgcgaccctgtc
cactctgtcagatcctcctgtgatgaggttacgggtcagtgtgtgtgcaaaccaggtttc
ggtggcaggacgtgtcgagaatgcaaagagctgttctggggagatccagaggtcaaatgc
cacgcttgtgactgcgactcccggggaatatccagcgagcagtgccatcgagccacaggg
cagtgtacctgcttagatcgtttctcaggtcctcgctgtgaccaatgtgccaggggatac
aagggagagttccctacctgtgaaccctgccaccagtgcttctccatctgggacactgtc
gttggcgagctgaccaatcagactcgtcgtctggaggcccaagttactgagctgctaacc
accggagtgacggcgccatacaaagaactggtcagcagtttggagagaaacgccagggct
gtcagggagattgtggaaaacaagactgctgcagagaacctggaaaatgtccgagacctg
atgcatcagattactggactgatgtcgttcctcaatggaaaactgaatatgaccaaggag
aacttgatcactgcctataagaacaataacaccacagaaaccagcttagatgcactgact
gatgaggccagcaagctggagcagtacatccaagagctcagacagcaggtgcacaacatc
aaaaactccaacatccaaggagccatgagcacaatttctgttgcatatattgagtcccaa
aatgcagagaaacgctccaaggaagcaaccagtgttcctggcaacactgtggaggagtca
gctgcattacggaaagccactgaggacaaactgagcagcagtcagaaggagtttgaccgg
aaacaccagagaaacgctcagaagctggacaaactggccgaagagttggagaagtttgac
ttgtccccgcttagtgagaagatgtgtggcagttcagctgaaggggaaagctgctcttcc
tgcggtggattaggttgtgtcagggaaaacggagcacctcactgtggaggagaggattgc
agtggttttgtcacaacttcccaaactgccctgaaaacctcccagaacctggaccaggag
atccagcaggctatggaggaagtggacaagctctccaggatggtgtgggaagcaaacatt
cgtgcaaaggaggccaaggctaaggctatggaggtgctgatctcatccaatcgtagcaaa
gaggcagtagaacagaacaacaagcagctccgtgacctcatcaaagagatacgagatctt
ctgaacaatgagaaggcagatgcttctgtgatcgaggcagtggccaatgaggtgctggct
ctggagatgccaacatcggcagagaaactgcaggagctgaccaatgagatccgggagaag
gtcggcactctgaccagtgtggaggagatcctcagtcagagcgctgaggacatccagagt
gcagagtctctcctacgtcaggccaaatcagcaagtgagaaggcatcacatatgaaggag
gccgcagacacagtgaagacagtcctggaagagactgagcgtactcagagcatcaccgcg
gacgccatccagctggctcggaacaacacaaaagaaaccgtagagttgcttaactctgtc
gagtcagagacggcacaatcagagctgaagctcagcaatgccaccagtcgtctgttggag
ctggagcaggaactgggcctgctgaggcagaacaacctcgagatgaaccagaaggtggaa
acggccgagcgggtctctgagcgggccaaacagattgcagaggaggctcagaaggagttt
gacgaggacctaaaagataaattggaggtggtggaggaccaagtggaggataaaggagag
tcagtgctgcaagcgaggaggaaagcagacgatctgcagcgagaagccaaggagctgatc
gcacagagcagcagcaagctgcagagactcaaagagctggagaactcctacgagaccaac
cagcagctcctgaaggagaaagctgaggcgctggccgtgttggagcaaacagccaagcgc
atcctggaggagatcagccacaaagtgtcgctatacagcagctgtcagtga
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integrated database retrieval system
