Girardinichthys multiradiatus (darkedged splitfin): 124883293
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Entry
124883293 CDS
T08099
Symbol
utp20
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmu03009
]
124883293 (utp20)
Ribosome biogenesis [BR:
gmu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124883293 (utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
Motif
Other DBs
NCBI-GeneID:
124883293
NCBI-ProteinID:
XP_047246284
LinkDB
All DBs
Position
17:complement(8912967..8945267)
Genome browser
AA seq
2807 aa
AA seq
DB search
MKIKSKSSYHKSENTYRFLTFAERLANVNIDVIHRIDRTGSYTEEVETYFSEGLTKWRDL
NLTEHFTTFLKEVANKSQSFNMLVFHQKYIVESLKTHLAVKNSLAYQPLLDLVVQLARDL
QTDFYPHFPDFFLLVTSLLDTKDTEVLEWAFTCLSYLYKYLWRLMVKDMTNIYSLYSTLL
AHKKEHIRNFAAESFSFLMRKVPDLDALLNHIFSDLEQNPDKVEGTGQLLFEMCKGVRKM
FHSCAATALSVAWRKLGLTTNRGISLPWDAVRDALDHMVQAAASYVDKEHFLVLWESLQV
SAEQLSDAVGRTDEVTCGAVEQLERLLFVLHTLVSHGGGAKVTKPEIICKMSVQLIESSF
RSASCSRLLLQITSSLLLGENISLPNVLIQETVQKIFSSRLEQDIILEFTKEMFTMNQFE
QLFLPSLLRFTAGLFGCGNATSRHSALDVLVSLILAKAPPPTDGSMAFETYPLLFTGQNI
SSKGAEQQMVPELVLSLIKLPEEQPITDLSLPWAALVLLPHLRPLSPAAVLPAVAAFVNH
LLHDIEAEKMGRAALFVARQALSCLLSLDCSAQLLSLVSVDKVYSVLQRFPTDVSALLLG
DLYHTRLSLSGVSEHLSHSTLLEIYEMLHSNLSSNVSKIRLLTLRIFSQFEAEIPPLTED
EETLKAQSVFAICLLAELVPASVQDYREKLLHLRKLRHDLVQRSLPRGPLGTFPQVPLRY
LISMLFVNFRPLWDAVIELIVSHAKGMENKDFWRVYYEHLEMVAELAEKELDVTDEDDRE
EDSGPRDEAGCDVIESGDVGVLFLDRLKLTSNPNERTDFPNFRSLLWRAMAQFPDRVEPR
SRELSPLLLRFIRNEFYPADMLVAPTQDLRKRSEAVHEESEMALEEEDEEEKEEEASKQQ
RKALPRRAAAKQLIAHLKVFAKFTNPRSLYLESSLSELYNQLLCHQDQQIQRVALECVLT
YKDPNIVPYKENLERLLDDKHFKEEIVHFNISEETGVVDASHRGRLIPLLMRILFGRLRS
KAGSKFQGKASAATRSSIILRFLAGSQSEELGMFIDLLLEPLCHYSQGSCLGAVEKAIAD
TNLAAVLPLGRQHSLLNIINVVLHKLGHLIHMNLPKVLQILLCVNASVCTILDQRGQLRA
GCVNPLKNLRRLGILRIQDFFDAFDLYSFSPDEIDAVFQAVVWPQVCRLPTESPYSPTPL
LKLIHVWCKNPRYFPLLAKQRPNHPECDTLLNVFALLSAKNASSATITMVMDMIEALATS
KDFVSSEAESELSVNGCVFPHPEEGAIITAEPLTMGSRLLLPHISTLLRYFSVVVRNTDR
LKKKKFRAQVAKELNILSKVSRFVSDKEQSSVLISLLLPYLLKGNNPQETEIDLLATIQN
LLRQSVQPSAFLQPLGKLFAVVHNKLPRQALTTVFQTLSDLDPSLTYITDLTTKLNAFDS
RHLDEIYFDVRLIAFQEATKRIKDMQTLDLDYISILIYNCFHTYEIGDMSLGDNATLCVS
AVISQVVAVGAGEQIYRDLIQHTILDAVHKGLRSKTESVQHEYTSILACLVKNFPAKKEF
RDLVQLTDYNDLESDFFEHMKHIQIHRRARALRTFAKQLTEGTVVMTPRSLQNYIMPYAM
TALLDEKMLKHENMTSASVEVVGAVCRKLTWSKYLYYLKHFVHILQTAQTEQKLAVSLLV
TVLEAFHFDHQTLSREMEAARAREAESAAMNADNEDEAAVGELETSDDEQAMEIDGKAAS
TDVHMETDATTRRENEDTPEQAVTSKTAAKAAPKMIPVASGLPQSREELESLIAAIHQTV
NDSVLPRLNKCLTAKIQRDEEHKAVKSKDVKDEEVVRIPIAFAMVKLMQTLPPHIMEANL
PGILIKVCVVLRNRFQEIRDVARGTLVKIIETLGCRYLQYLLREMQGVLVKGYQMHVLTF
TVYQLLSAVSPTLKSGDLDPCMGMLIGIFNNELFGSVAEEKEVKGIVSKVMEARHSKSMD
SYELLARFCSKESIIKLILPLKEILETSSTLKVCNRVAAVLRRLILGLLENCGMTSQDIL
LLCHGLVSQSLPLLTKRDREKASVKPPPDPRLPPSSCLLLPPTPKRGGQKAPVSSRTNMH
ILVDAGLKLLHLSLKKSKVTSAEASTLEMLDPFIQLLLECLNSMHVKVITEALVAFTLLL
RFPLPAVEQNAEQLTKQLFVLLKDYSKAGAARGENYQLVQNCFKAMTILVKNIKSNKISE
TQLQVLLGYAEEDIYDQSRQATAFGLLKAILFRKLIVPEMEQVLKKVATLSVTGGNNMIR
THCRQIYLKYLLDYPLGRKLKGHLGFVVAQLQYEQDTGRESVLELLASIFQAFPQNLLLT
YSSLFFAPLALIVVNDDAVRCKKMAAMAIKTLLGQLDMTHQNGLYSFVNTWLSAEKSTLR
RLGAQVCGLFVEVEEEKFASRMDDLLPVLEKEIHPDTYEDIEEEEEEKGADRLLFSYLTL
ICKLNKHCGLLELSKPHDMLLHIWGHIEAHLRHPHCWVWLTASQLFGQLFAAQPAEQLVA
IWRGEGRDTSSCPAALDFITSNLDKRMRELALSFCHQLQSKFLDTASGEQVIKNLLFVGK
VIYLISPESNITSLEEVKDEEERETENGEDGDHEKEKEMEEEEEEEEEENHDEKDNRPPS
LLWLMKKLSLMAKREAAYAPKVPLKRTCVFKFLGAIAVDLGKEHLGPYLTTIITPLYREL
DSTYAEQDPTLKNLAQELIELLKKQVGLERFSLAFSAVQKEFSQRRAARKRHRAMQAVAN
PDIAAKKKLKKHRNKIEAKKRKIEVLRPGYKAKKHRSHALKDLAMVQ
NT seq
8424 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcaaatccaagtcttcgtatcacaaatccgagaacacctacaggtttctcaca
tttgctgaaaggcttgccaatgtcaacattgatgtcatccatcgcattgaccgaactgga
tcttacacagaggaggttgagacatacttctcagagggactgacaaaatggagagacctc
aacttaacggagcatttcactacatttttgaaagaggtggccaacaagagccagtccttc
aacatgctggttttccatcagaagtacatagtggaaagcctgaaaacccatctggcagtc
aagaacagtttggcctaccagcctctgctggatctggtggtgcagctggccagagacctg
cagacagacttttatccccacttccctgactttttcctcctcgtcacatccctgctggac
acgaaggatacagaggtgctagagtgggctttcacctgcctctcctacctatacaagtac
ctgtggaggctcatggtgaaggacatgaccaacatctacagtttgtacagcacattattg
gcacataagaaagagcacatccgcaactttgcagctgagagcttctctttcttgatgaga
aaggttccagatctcgacgctttgctaaatcacattttctcagacctggagcagaaccct
gacaaggtggagggcacgggtcagctgctgtttgagatgtgcaaaggggtccggaaaatg
ttccactcctgtgctgcgactgctctttctgttgcctggaggaagctcggtctcacaacc
aaccgggggatctctctaccttgggatgcggtcagggacgctttggatcacatggtccag
gcggcggccagttatgtggacaaggaacacttcctggttttatgggaatcactgcaggtc
agtgcagagcaactgtcagatgctgtgggaagaacggatgaagttacatgtggggcagtg
gagcagctggagaggctgctctttgttctccacacactggtgtcccacggaggtggagcc
aaagtcaccaagccggagataatctgcaagatgtctgtacagctgattgaaagctccttc
cggtcagcgtcctgctcccgtctcctccttcagatcacctcctctctgctgctaggggag
aacatcagcctacccaacgtgctcatacaagaaactgtccaaaagatatttagcagcagg
ttggagcaggatatcatactggagttcactaaggagatgttcaccatgaaccagtttgaa
cagctcttccttcccagccttctgcgcttcaccgctgggttgtttggatgtggaaacgct
acgtcgcgccacagcgctctcgatgtgctggtcagtctgatcctcgccaaagccccgccc
cctactgatggctccatggccttcgaaacctacccacttctgttcaccggccagaacata
agcagtaagggggcagagcagcagatggtaccagaactggttctgtccctgatcaaactt
ccagaggagcagcccatcactgatctgtcgctgccttgggccgcactggttctgttgcca
cacctcagacctctgtctccggctgccgttctccccgcggtagcagcttttgtaaatcac
cttctccatgacatcgaggcagagaaaatgggaagagctgccctgtttgtagccagacag
gctctgagctgtctcctctcattggactgctctgcccagctgctctcactggtatctgtg
gacaaagtctactcagtcctgcagaggtttcccacagacgtgtcggctctgctgctcgga
gacttgtaccacacccgcctatcgctcagtggcgtatcggagcatctgtcccacagcacc
ctgctggagatctatgagatgctgcactccaacctctcctcaaatgtttccaagatccgc
ctgctgactctgaggatcttctcccagtttgaggccgagatcccaccactgaccgaggat
gaagagaccttgaaggctcagtcagtgtttgccatttgcctgctggctgagctggtcccc
gcatcggtgcaggactacagggagaagctgcttcacctccggaaactaaggcacgacctg
gtgcagcgcagcctgccacgggggccgctgggcaccttcccgcaggtccctctgaggtat
ctcatttccatgctgtttgtcaacttcaggccactgtgggatgcagtcattgaactcatt
gtgagccatgccaaaggaatggagaacaaggacttctggagggtttattatgaacatttg
gagatggtggcagagttggccgagaaggagttggatgtgactgatgaagatgaccgtgaa
gaagactcaggcccaagagacgaggctggctgtgatgtcattgaaagcggcgacgtgggg
gtgctgttcctggatcggctgaagctgacctccaaccccaacgagaggaccgacttcccc
aacttccgcagcctgctgtggcgagccatggcgcagttccccgacagggtggagcctcga
agcagagagctgagtcccctgctgctcaggtttatcaggaatgagttttatcctgccgac
atgctggttgcaccaactcaagacttgaggaaaagaagtgaagctgtccatgaggaatcg
gagatggctttggaggaggaggacgaggaggagaaggaagaggaggcaagcaagcagcag
aggaaggcacttccaaggagagctgctgcaaaacagcttattgctcatctgaaggtgttt
gcaaaattcaccaaccctcggtctctctatctggagagcagcctcagtgagctctataac
cagctgctctgccatcaggaccagcagattcagcgcgtggcactggaatgtgttcttaca
tacaaagaccccaacatagtgccctacaaggagaatcttgagcggctactggatgacaaa
cactttaaagaggagatcgtccacttcaacatttcagaggaaacaggcgtagttgatgct
tcccacagaggcagactgattccactgctcatgaggatcctatttggccgtctgcgcagc
aaagctggcagtaagttccagggaaaggcgagcgccgccactcggtcctccatcattttg
cggttcctggcagggagccaatcagaggagctggggatgttcatcgaccttcttctagag
cctctgtgccattacagccaaggatcttgtctgggtgctgtagaaaaggccatagcagac
acgaacctggccgccgtccttcctctgggccgtcagcacagcctgctgaacatcatcaat
gttgtgctccacaaactggggcacctcatccacatgaacctgcccaaagtgctgcagatt
ctgctgtgtgtcaacgcctctgtgtgcaccatcttggaccaaagaggccagcttcgagca
ggatgcgttaatcccctgaagaacctgaggagactgggtattctgaggattcaggacttc
ttcgatgcgttcgacttgtacagcttcagccctgatgagatcgatgccgttttccaagca
gttgtctggcctcaggtgtgccgtctccccacagaaagcccctattcccccacccctctg
ctgaagctcatccatgtgtggtgcaaaaatcccaggtatttccccctcctagccaagcag
aggccaaaccacccagagtgtgacacccttctaaatgtctttgccctcctgtctgccaaa
aacgcatcctcggccaccatcaccatggtgatggacatgatcgaggctctggcaacatcc
aaagatttcgtctcgtcagaggctgaatctgagctcagcgtaaatggctgtgtgttccca
catcctgaagagggcgccatcatcacagcagaacccttaactatgggctccagactccta
cttcctcatatctccaccttgctacgctatttcagcgtagttgttcgcaacacagacaga
ctcaagaagaagaagttcagggcacaagtggccaaagagctcaatatcctctccaaggtg
agtcgatttgtaagcgacaaggagcagagctcggtgctcatcagcctgctgcttccttat
ctcctgaaaggcaacaaccctcaggaaacagagatcgacctcctggccaccatccagaac
ctgctgcggcagagcgttcagccctcagccttcctgcagccgctcggcaaactcttcgcc
gttgttcacaacaagctgcccagacaggccctcaccaccgttttccagactctttcagat
ctggacccttcactcacatacatcacagatttaacaacaaagctgaacgcattcgacagc
cgacacctggatgagatctactttgacgtgcgcctgattgctttccaagaggcgacgaag
cggattaaagacatgcaaactctagacctggactacatcagcatcctcatatacaactgt
ttccacacatatgagatcggtgacatgtcactgggagacaacgccaccctgtgtgtgtct
gcggtgatcagccaggtggtagcagtcggggccggggagcagatctacagagatctaata
caacacaccatcctggatgctgtccacaaggggctccgcagcaagacagagagcgtgcag
catgaatacacctccatccttgcttgtctggtgaagaactttcctgctaagaaagagttc
agagacctggtgcagctcacagactacaatgacctggagtctgatttctttgagcacatg
aagcacatccagatccaccgtcgagcacgtgctctgaggacgtttgccaaacagctgacc
gagggcacggtggtgatgaccccgcgttcacttcagaattacatcatgccgtacgccatg
actgccctgctggacgagaaaatgctcaagcatgagaacatgacatcagcctcggtggag
gtggtgggagcggtatgccgcaagctgacatggtccaaatacctgtactacctgaagcac
tttgtccacatcctgcagacagcacagactgagcagaaactggctgtcagtttgctggtc
actgtgctggaggctttccattttgaccatcagaccctcagcagagaaatggaagctgcc
cgagccagagaagccgagagtgctgcgatgaatgctgacaacgaagatgaagctgcagtc
ggagaattggagaccagtgatgacgaacaggcaatggagatcgatggcaaggctgcttcc
accgatgtccacatggaaacggatgctactacgcgaagggagaatgaggatacaccagag
caagcagtcacatcaaaaaccgcagcgaaggcagctcctaaaatgatccctgtggccagt
gggttgccacagagcagagaggagctggagtcgctgatcgccgcgatccaccagactgta
aatgacagcgtgctgccccgcctcaacaagtgtctcactgcaaagatacaacgtgacgag
gagcacaaagcagtaaagtctaaagatgtaaaggatgaggaggtggtgcggatacccata
gctttcgccatggtcaaactcatgcagactctgcctcctcacatcatggaggccaacctt
ccagggatcttgatcaaggtttgcgtcgtgctgaggaaccgtttccaggagatccgtgat
gtagcaagaggaacgttggtgaagatcatcgagactctgggctgcaggtatctgcagtat
ctgctcagagagatgcagggggttctggtcaaaggctaccagatgcacgtgctgacattt
actgtgtaccagctgctgtctgcagtcagtccaacgctcaagagtggggacctggacccc
tgcatgggcatgctgattggaatcttcaacaatgagctgtttgggtctgttgctgaggag
aaggaagtcaagggcatcgtttccaaggttatggaggcacgacacagtaagagcatggac
tcgtacgagctgctggcacgcttctgcagcaaggagagcattatcaagctcatcctaccg
ctgaaggagatcctggagacctcatctactttgaaggtgtgtaatcgggtggcagctgta
ctgcggcgcctgatcctgggtctgcttgaaaactgcggcatgacctcacaggacatcctg
ctgctgtgccacggcctggtcagccagagcctgccgctgctcaccaagagggaccgagag
aaagcgtcagtcaagcctccgccagatccccgacttcccccttctagctgcttgctgctg
cctccaaccccaaagagaggaggtcagaaagctcctgtcagcagccgcaccaacatgcac
atcctggtggacgctggactcaagctgctccacctgagcctaaagaaatctaaagtgact
tcggctgaggcatcaactctggagatgctagatccttttattcagctgctgctcgaatgc
ctgaactccatgcatgtgaaggtgatcaccgaggctctggtagcattcaccctgctgctg
aggtttcctctgccagcagtggagcagaacgccgagcagctgaccaagcagctctttgtt
ctgctgaaggattactcaaaggctggagctgcgcgcggagaaaactatcagttggttcag
aactgcttcaaggccatgaccattctcgtaaagaacatcaaaagcaataagatctctgag
acgcagctgcaggtgctgctgggatacgctgaggaggatatctatgaccagtcgcgccaa
gccaccgcctttgggctgctgaaggcgatcctgttcaggaagcttattgtcccagagatg
gagcaggtgttgaaaaaagtggccacgttgtcagtcacggggggaaacaatatgatcaga
actcactgtcgacagatctacctaaagtacctgctggactaccctctcgggaggaagctg
aaaggccacctggggtttgtggttgcccagctgcagtacgagcaggacactggcagggag
tctgtgctggaactgctagcctccatcttccaggcgttccctcagaatctgctgttgacg
tacagcagcctgttctttgccccgctggctttgatcgtggtcaacgacgacgcagtccga
tgtaagaaaatggccgccatggccatcaagacgctgcttggccagctagacatgacccac
caaaacggactgtactctttcgtcaacacctggctctctgcagaaaagtccaccctgcgg
cgcctcggagctcaagtttgtggcctgtttgtggaagtggaggaggagaaatttgccagt
agaatggacgacctgttgcctgtgctggagaaggagatccaccctgacacctatgaggat
attgaggaggaggaggaggaaaaaggagcggacaggctgctgttcagttatctcaccctt
atctgcaaactgaacaaacactgcggtttgctggagctcagcaaacctcacgacatgctc
cttcatatttggggtcacattgaagcccacctgcgccaccctcactgctgggtgtggctc
actgcctcgcaactcttcggtcagcttttcgctgctcagccggcggagcagctggttgcc
atttggagaggagagggaagagatacttcatcttgcccagcggccctggacttcatcacc
agcaacctggacaagaggatgagagagttggctttatctttctgccaccagctgcagtcc
aagttcctggacacggcatcaggggagcaggtgatcaaaaacctactcttcgttgggaag
gtgatttacctcatatccccagagtctaacatcacatctctggaagaggtgaaagatgag
gaggagagggagactgaaaatggagaggatggtgatcatgaaaaagagaaggagatggag
gaggaggaggaggaggaagaagaggagaaccatgatgaaaaagacaacagacctccttct
ttgctgtggctcatgaaaaagctctctctgatggcgaagagagaagcggcctatgctcct
aaagttcctctcaagcgaacatgtgtgtttaaattcctgggagccatagcggtggacctg
gggaaggaacacctcggcccctacctcaccaccatcatcactcctctgtacagagagctg
gacagcacatacgccgagcaagatccaaccctgaagaacttggcacaggagctgatagag
cttctgaagaaacaggtgggactggagaggttctccctagccttctctgcagtccagaag
gagttttcacagagaagagcagctcgtaagagacatagagccatgcaggcggtggctaac
ccagacatcgctgccaagaagaaactgaagaagcacaggaataaaattgaagcaaagaaa
agaaagattgaggttctgcggcctggttataaagccaagaagcaccgaagccacgcgctc
aaagacctggccatggtgcagtga
DBGET
integrated database retrieval system
