Girardinichthys multiradiatus (darkedged splitfin): 124883322
Help
Entry
124883322 CDS
T08099
Symbol
shank3b
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SH3_2
Ank_4
Ank_3
SAM_2
PDZ_6
Ank_5
PDZ
SH3_9
SH3_1
FERM_f0
ATP_bind_3
Motif
Other DBs
NCBI-GeneID:
124883322
NCBI-ProteinID:
XP_047246331
LinkDB
All DBs
Position
17:26511857..26586868
Genome browser
AA seq
1738 aa
AA seq
DB search
MPLSPTADTKHDRLRQQAVTNGNPTGSAVARDDDGEDTLSGNSIVVRIGIPDLQQTKCLR
LDPELPVWTSKQRVLVTLTQSLSDVLNYGLFQPAFNGRAGKFLDEERLLKEYPLPPITPI
PYLEFRYKRRVYTQSYVDDKQLAKLHTKANLKRFMEHVHQKNAEKVAKWLEKGLDPNFHD
SDSGECPLTLAVQLEDSCELIKVLRSGGAHLDFRTRDGITALHRAVLCRNSAALTTLLDL
GASPDYKDSRGLTPLYHSAMVGGAPYCCELLLQDHATIGITDENGWQEIHQACRYGNVQH
LEHLLFYGANMSSQNASGNTALHLCALYNQDSCARVLLFRGANKDIKNYNNQTAFQVAII
AGNFDLAEIIKIHKTSDVVPFRETPSYTKRRRVGATRTPAGNGLSSPRSLIRSASDNALE
SPASSPGPSLQSLETHHDTHTHSLRRHTRRLRYAQVHLHEAPVKPASLTGLSSCSPSGGG
LVETSPPSSPPPTPQMRKRRLYSAVPGRTFIATRSHVPQGPGEIQLHRGERVKVLSIGEG
GFWEGTVKGRTGWFPADCVEEVQMRQYDPRLETREDRTKRLFRHYTVGSYDNYTSYSDYV
IEEKTAVLQKRESEGFGFVLRGAKAETPIEEFAPTPAFPALQYLESVDQGGVAWRAGLRT
GDFLIEVNGTDVVKVGHRQVVSLIRQGGSRLLMKVVSVSRKSESNLIRKKAPPPPKRAPS
TSLTLRSKSMTADLEEIARRRRYEKLDEMLAGGQQEVILRARPSDDFRAATVKQRPTSRR
ITQAEINSLFERQGLVPPSAPEKSTMPLPRGMSRTKSFGTPDDDRISALIHESRFPRSSS
LTDSSIPPPPQTAPPPPPSASSTSSLYLFDSGPPPSFLPPPPPARGEGLTRSSFKPGAEP
RLQELSDARSHAHAERQRKARSMIILQDTPPPPALQPDGHAAASTHALHTASQTSTLSIH
STSPALGHSPLSRRRGRPIENPYANVGHQAPPSKPQRRKSPLLKQLPVEEQGLGIKDHDS
SKSDGGGLMSPSRAELYQQQVLSERARVQGRRSSLFLSVEGSGSEYQAPPLLTQSHSMDD
LGELPPPAPVLSPSPTPHTFLHPLTGKPLDPSSPLALALAARERALTARTPSPEPRIKHS
SASTTPIPTPAASPETRHKRTPFTTPQSSPEPRSKRISPQTSPEQRTKHTTPQTSPELRH
KRITPPLFPDGQVERPETEGGVTSPAAPSPERWRPSPLPALANESHSALIDRRRSLTVGS
SEEEGGAYTVTLPPALLSSSDEETREELRRIGLVTPPPGFATPPAPPPPSSLSLLPRRGG
EGGGESAPESLGKRGDEEEGGDERLHDSSLSPSSLPPSITLASPPAPTSPSSPPATHPSP
SAAATSPSALKPRLRSPIGRGRSALRDPLLKQSSDSELLPSAASTSSPSSPLCCSPTSGS
SRQPRYLFQRRSKLWGGGDEERRGLSPEEGGGRPAALGGQSSGSAIDLTTRSASALELSG
RAGSGLDLANRLQLLNKDSHSLGEEPSPLDPGRRSPVGGARLFSSLGELHTISQRGYGAS
YTVRPGSRYPVTRRSPSPSPSPSDRSMGLGSSPAPCSERPDLSSGRGLTILKSSSLSLPS
EPKEVRFVMRSASARTRSRSPSPSPHASPCPSPVLSGPLLALRPWRQRPLNLWNKYDVGD
WLESMGLAEHRQRFQEHEIEGSHLPALTKEDYVELGVTRLGHRINIERALRQLLDSST
NT seq
5217 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgagtccgaccgctgacaccaaacatgatcgcctgcggcaacaggcggttact
aacggcaacccaacaggctctgctgtcgccagggatgatgacggggaggacacactctct
ggaaacagcattgtggtccgaatcgggatcccggacctgcagcagacgaagtgtttgcgg
ttggacccagagttaccagtttggaccagtaagcagagggttctggtgacgttgactcag
tctctgtcggatgttttgaactatggtctcttccagccggcgttcaacggccgagccgga
aagtttctggacgaggagcgcctgctgaaggagtatcctctgccccccatcactcccatc
ccgtacctggagtttcgttataagaggagagtttacacacagagctacgtagacgacaaa
cagctggcgaagctgcacacgaaggccaatctgaagcgatttatggaacatgttcatcag
aagaatgcggagaaagtggccaaatggctggagaaaggtctggaccccaacttccacgac
tcagacagcggagagtgtcctctgactctggccgtccagctggaggacagctgtgagctc
ataaaggtccttcgtagtggaggagctcacctggacttcaggaccagagacgggatcacg
gctctgcaccgggccgtcctctgcaggaacagcgccgcgctcacgactctactggacctc
ggagcgtctccagattacaaggacagcagaggtctcactccgctctaccactctgccatg
gtgggtggcgccccctactgttgcgagctgctgctgcaggaccacgctactattgggatc
actgatgagaacgggtggcaggaaatccaccaggcatgtcgctatggtaacgtgcagcac
ttggagcacctactgttctatggcgccaacatgagttcccagaatgcctcaggaaacact
gccctgcacctgtgcgccctgtacaaccaggacagctgcgcccgggttctgctgttcaga
ggagccaacaaggacataaagaactacaacaaccagacagcctttcaggtggccataatc
gctggtaactttgatctggctgaaatcatcaagatccacaaaacatcggatgttgttccc
ttcagagaaaccccctcctataccaagcgccgccgggtcggcgccaccagaacaccggct
ggaaacggcctctcatctcctcgctctctgattcgttcagccagtgacaacgccctggaa
agccccgcctcctccccaggcccctcccttcagagcctggagacgcatcatgacacgcac
acgcactcactgagacgccacacgcgtcgcctcaggtacgctcaggttcacctgcacgaa
gctccagttaaaccagcgtctcttactggtctgtcgtcctgcagcccgagtgggggaggt
cttgtggagaccagccctccctcctcacctcctcccactccacagatgaggaagaggagg
ctttacagtgcagtgcctggacgcacctttattgccacccggtcccacgtgccccagggg
cccggagaaatccagctgcaccggggggagagggtgaaagtgctttcaatcggtgaagga
ggcttctgggagggaaccgttaaaggcagaactgggtggtttcctgctgactgtgttgaa
gaagtccagatgagacagtacgacccgcgactggagacgcgagaggaccgaacgaagagg
ctgttcaggcactacacagtgggctcctacgacaactacacctcctacagcgactacgtg
atcgaggagaaaacagccgtgctccagaagagagaaagtgaaggattcggcttcgtcctc
cgaggagctaaagctgagacgcccatcgaggagttcgctcccacaccggcgtttcctgct
ctgcagtacctggagtcagtggatcaaggaggcgtggcttggagggcggggctaagaaca
ggagacttcctcattgaggtgaacgggaccgatgtggtgaaggtgggtcaccggcaggtc
gtctctctgatccgacagggaggaagccggctgctgatgaaagtcgtctcagtttccaga
aaatcggaaagcaacctgatcaggaagaaagctccacctcctccaaagcgggcccccagc
acctcgctgacgctccgatccaagtccatgaccgctgacctggaggagatagccaggagg
agacgttacgagaaactggatgagatgctggccggaggtcaacaggaagttatcctgagg
gcccgcccatcggacgacttcagagcggcgacggtcaaacagagaccgactagccgacgc
atcacgcaggcagagatcaactccctgtttgagcgtcagggtctggtaccgccctcggct
ccagagaagagcacgatgcctttaccgagagggatgtccagaaccaagagctttggcaca
ccagatgatgacagaatctcggctctgatccatgagagccgttttccacggagctcctct
ctgacggacagctccatcccacctcctcctcagacagctccacccccacctccttctgcc
tcctccacctcctcgctgtacctctttgactccggcccacctccatccttcctccctcct
ccgcccccggctcgaggggagggactaacccgctccagcttcaagccgggggcggagcca
cggctgcaggaactctcagatgccaggagccacgcccacgccgagcggcagaggaaagcg
aggtccatgatcatcctgcaggacacgcccccaccaccagcgcttcagccagacggccat
gccgctgcctccacacacgcactccacaccgccagtcagacctccacactgtccatccac
agcaccagccccgccctcggacactcgccgctgtcacgtcgccgaggacgaccaatagaa
aacccttatgccaacgtgggacatcaggctccgcccagcaaaccccagaggaggaagtcc
cctttgctgaaacaacttcctgttgaggagcagggtcttggaatcaaagaccacgattcg
tccaaatccgatggaggtggactcatgagcccgagcagagcggagctatatcagcagcag
gttctttctgagcgcgcccgggttcagggtcgccgctcctctctcttcctgtctgtagag
gggtcggggtcagaataccaggctccgccccttcttactcagagccactccatggacgac
ctcggagagctcccacctccggccccggtcctgtcaccttcaccgacgcctcacaccttc
ctccacccgctgacaggaaaacctctagatccatcgtctccacttgccttggctctggct
gcgagagagcgagcgctcactgcccgaacgccgagtccagaaccccgaattaaacacagc
tccgcctccactacacctattcccaccccagcagcgagtccagagaccagacacaagcgc
accccattcaccactcctcagagcagtcctgagccacgatccaagcgcatctctccccag
acgagccctgagcagcgaaccaaacatacgactcctcaaaccagccctgagctgaggcat
aaacgaatcacgccaccactgtttcctgacggacaggtggagcgacccgagactgagggt
ggagtgacgtcacctgctgccccctcccctgaacgatggagaccctcccctctaccagca
ctggccaatgagagccactcagctctgattgacagacggagaagtcttacggtcggcagc
tctgaggaggagggcggggcttatactgtgaccctcccacctgccctgttgtcgtccagc
gatgaggaaaccagggaggagctgcgcagaattggtctggtgacccctccccctggcttc
gccaccccccctgcccctcctcccccatcctccctatccctgttgccacggcgaggagga
gagggaggaggggagagtgccccggagtccctagggaaacgaggagatgaggaagaagga
ggtgacgagcgtctccatgacagctccttgtcccccagttcactccctccctcgatcacg
ctggcttcccctcctgctccaacctctccttcctccccacctgccactcacccatctccc
tcagccgccgcaacctccccttcagctctgaaacctcgcctccggtcaccaatcggtcgg
ggccgctctgcgctgcgggacccgctgctaaagcaatcatcggacagtgagctcctcccc
tccgctgcctccacttcctcaccctcctccccactctgctgttcccccaccagcggcagc
agccggcagccacgctacctattccagaggaggtcaaagctgtgggggggtggggacgaa
gagcgtcgtggtctgagccccgaggaaggtggaggacgtccagcagcgctaggaggacaa
agctccgggtcagcaattgatctgacaacccgctcggcatccgccctggagctaagtggt
cgggccgggtcgggacttgatctggctaatcggctccagctgctcaacaaagacagccac
tctctgggggaggaaccaagtccactggatcctggccggaggtcacctgtagggggtgcc
aggttgttctccagccttggtgaacttcacaccatctcccagcgaggatacggcgccagc
tacacagttcgaccaggaagtcgctatcccgtcacccgccggagcccctcaccttctccc
tccccctcggatcgatctatggggctcggctcctcccctgctccctgctctgaacggccc
gatctgagctcgggtcgaggtctgaccatcctaaagtcttcaagtctcagcctgccatcg
gaaccgaaggaggttcgttttgttatgagaagcgctagtgcacgaaccagatcccgctct
ccttcgccttcgccccatgcctccccctgcccctccccggtcctcagtgggcccctgttg
gcccttcggccatggaggcagcggcccctcaacctgtggaataaatacgacgtgggcgac
tggctggagagcatgggcctggccgaacaccgccagcgcttccaggagcatgagatcgaa
ggctcccacctccctgccctcaccaaggaggactatgtggagctgggcgtcaccagactg
ggacaccggatcaacatcgagagggctctcagacagttgctggacagctccacttga
DBGET
integrated database retrieval system
