Girardinichthys multiradiatus (darkedged splitfin): 124883483
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Entry
124883483 CDS
T08099
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124883483 (vps53)
Membrane trafficking [BR:
gmu04131
]
Protein recycling
Others
EARP complex
124883483 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
124883483 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
Laminin_II
VPS51_Exo84_N
FBF1
Syndetin_C
hAT-like_RNase-H
NBD94
Sec8_N
COG5_N
Motif
Other DBs
NCBI-GeneID:
124883483
NCBI-ProteinID:
XP_047246547
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All DBs
Position
18:25487511..25527983
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AA seq
832 aa
AA seq
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MMEEEEFEFTEDLEAILHLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDDIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFHKYMGIPQIRQLSERVKAAQSELGTQILADFEEAFPSQGSKRPGGPSNVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYMVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITKVELAKVMRTRAKEIEVKLLLFAIQRTTNFEGLLAK
RFTGCTLTDAPGQQKRPESPLDQTNPFLEDEPGDDGGSEKDEDLTKPRKPKAPGNPFHGI
ISKCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKAGTEEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKFLREYAWKILSGNLPKSSSNSGGLTITSLLKEKEGYE
AAKFTVDELCLICSILSTAEYCLATTQQLEEKLKEKVDKVLVERINLTGEMDTFSSVISN
SIQLLVQDLDAACDPALSAMSKMPWQSVEHVGDQSPYVTSIIMHIKQNVPIIRDNLASTR
KYFTQFCIKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRK
APASYTKIVVKGMTRAEMILKVVMAPHEPSVVFVDNYIKLLVDGNPETFQKILDMKGLKR
SEQSSMLELFRQRLPTPPSGADSGPSLSFSAPTPEQESSRIRRLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaagaggaatttgaatttactgaagatttagaggcaattttgcatctaact
ccagaggtgcagctagccattgaacaggttttccccagccaggaccctctggacagagca
gacttcaatgctgtggaatacatcaacactctctttcccaccgagcagtctttggcgaat
atcgatgatgttgtaaataaaattcgactaaagatacggcgtcttgatgatgatattaga
acggtagtgagaggtcagaccaatgtggggcaggatggtagacaggctttggaggaggcc
cagatagcgatccagcagctctttggcaaaatcaaagacattaaggacaaggcagagaag
tccgaacaaatggtcaaggagattacgagggacatcaagcagttggatcatgccaaacgc
cacctcactacttccataaccaccctcaatcacctgcacatgttggcggggggtgtcgac
tctttagaagccatgaccagaaagaggcagtatggtgaggtggccaacctgctgcaggga
gtggtcaatgtgcttgaacatttccacaaatacatgggcataccccagatccggcagctt
tcagagagagtgaaggcagcacaaagtgagctggggactcagattctggcagattttgaa
gaagcctttccttcgcaaggctccaagagaccaggtggacccagtaatgtgctgagagat
gcttgcctggtggcaaacgttctcgacccgcgcatcaaacaggagataatcaaaaagttt
atcaggcagcacctctccgagtatatggttctcttccaggaaaatcaagatgtcgcctgg
ctggataagattgatcgccgctatgcctggatcaaacgacagctggtagactatgaggaa
aaatatggccgcatgtttcctgaagaatggtgcatgacggagcgaatcgctgtggagttc
tgccacatcaccaaggtggagctggccaaggtgatgcgaacacgggcgaaggaaattgag
gtgaaactgctgctgtttgctattcagaggaccacaaactttgagggtttgctagccaag
cgcttcacaggatgcaccctgacagatgcacctgggcagcagaagagaccagagagccca
ctagaccaaactaacccctttttggaggatgagccaggggacgatggaggatcagaaaag
gatgaagatcttactaagccgaggaagcccaaagctcctggcaatccattccacggcatt
atctccaagtgttttgaacctcacctatatgtctacatagagtcccaagacaagaacctt
ggtgaattgattgaccgttttgtggctgatttccgagcacaaggcccacccaaggcaggc
accgaggagggtggagcagtgctccccagctgtgccgacctctttgtttactacaagaag
tgtatggtccagtgttcccaactcagcactggcgaacccatgatcgcccttacaacaatc
ttccagaagttcctcagagagtatgcttggaagatcctttctggcaacctgccaaaatcc
agcagcaacagcgggggtctcaccatcaccagcctgctgaaggagaaagaaggctacgag
gcagcgaagtttaccgtagacgagctctgcctgatctgcagcattctcagtactgcagaa
tactgcctggctaccacacaacagctggaagagaagctgaaggagaaagtagacaaggtg
ctggtggagaggataaatctgactggggagatggacacattcagctctgtgatctcaaac
agtatccagctgctggtccaagatctagatgctgcctgcgatcccgctctgagtgctatg
agcaagatgccgtggcagagcgtggaacatgtgggtgaccagagtccttacgtcacatca
atcatcatgcacattaagcaaaacgtgccgatcatcagagacaacctcgcctccactcga
aaatactttacacagttttgcatcaagtttacaaactctttcatccctaaatttattaac
cacctgtttagatgtaagcctatcagcatggtgggagctgaacagctcctcctggatacc
cactccctgaagacagttttgttggatctgccgtccataggctcccaggtgctccgaaag
gcacctgccagttacactaagattgtagtgaaaggcatgacacgtgcagagatgatactg
aaggtggtgatggccccacatgaaccatcggtggtgtttgttgataactacatcaaactt
ctggtcgacggcaacccggagactttccagaagatcttggacatgaagggtctaaaacgc
agtgaacaaagcagcatgctggagctcttcaggcaaaggttacccaccccaccctctgga
gctgacagcggcccatctctgtccttcagtgctcccacccccgagcaagagtcgtctcgc
atccgcagactggagaagctcatcaaaaagagactgtga
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