Girardinichthys multiradiatus (darkedged splitfin): 124883603
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Entry
124883603 CDS
T08099
Symbol
tsr1
Name
(RefSeq) pre-rRNA-processing protein TSR1 homolog
KO
K14799
pre-rRNA-processing protein TSR1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmu03009
]
124883603 (tsr1)
Ribosome biogenesis [BR:
gmu03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
124883603 (tsr1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Tsr1_G-like
Motif
Other DBs
NCBI-GeneID:
124883603
NCBI-ProteinID:
XP_047246733
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Position
18:complement(36163318..36182200)
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AA seq
829 aa
AA seq
DB search
MVKMAANEEKQQGHRPGVYKQKNKGHKHGRHRTKGELDRENKGRVPVTTLTKKQRKELKK
MDRRHKANQLRRTKKDQVLTEKRRLGSRDGPPHLVAVVSLHANADAAAVTKLLRGEDAGG
VVHQEECISGVRDSFGLILPRFKQRFTFFNQSTADMHSLLDVAKVADSLLFVLDSAEGWD
NYGDHCLSCLFAQGLPSHALVCQGFSDITVKKRVDFRKALSKITEVRFPDTRLFPLDSDQ
DATLLLRHLGSQRQRKLGFRSRRSHLLAQHVTFTANSPVEGTGGGLTDLGTLCVSGYVRG
RALHADRLVHISGHGDFQLSQIDAPPDPLPLNLTRPTKPGKGRDVEMQVGDENEAPVRVL
MKADLSNRESLRAEAEVDPMDGEQTWPTEQELLEAEEASKIKHVMKVPKGTSDYQATWIV
DEEENGETEEESSDDDDLMDEAMDGEDEENNSQEAGSHYASEEEDDVEEEEEMCSTERAG
ADQRYDDNVDEAAEEEGLKRYWEARSHEMFPDEVDTPLDTPARIRFQRFRGLKSFRSSPW
DPMENLPLDYSRIFQFQSFERTRRRILAEAAADEDGAMDGWYVTLHIIDVPFSVMASVQS
GKPLVLVSLLPHEQKMSVMHLLVQRHPSNTEPIKSKEELVFHCGFRRFRASPIFSQHTTA
DKHKMERFLRPDAPTVVSVYAPITFPPTGVLLFKERNDGVQDLVATGSLLSCNPQRVVLK
RIVLSGHPFKINRRSAVVRYMFFNREDIMWFKPVELRTKWGRRGHIKEALGTHGHMKCVF
DNQLRSQDTVLMNLYKRVYPRWTYDPYVPPQLPWFKKEVTVEMDDLDME
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatggctgcgaatgaggaaaaacaacaaggccacagacccggcgtttacaag
caaaaaaataaaggacacaaacatggcagacacaggacgaaaggtgaactcgacagagaa
aacaaaggcagagtgccagtaacaacccttactaaaaaacagaggaaggagctgaagaag
atggacagaagacataaagctaaccagcttcggagaactaagaaagaccaggttctgaca
gaaaagcggcgactcgggagcagggacggtccccctcacctggtggctgtggtgtccctg
catgctaatgcggatgctgcagcggttacaaaattgctacggggagaagacgccgggggt
gtggtgcaccaagaggaatgcatcagcggtgtccgtgacagctttggactgattctgcct
cgtttcaaacagaggttcacgtttttcaaccagagcacagctgacatgcactccctgctg
gatgttgcaaaggttgcagacagcctcctgtttgtcctggactcagctgaaggttgggac
aattatggagatcattgtctctcctgcctctttgctcagggcctccccagccatgctctg
gtgtgtcaaggtttttctgacattactgtgaagaagagggtcgatttcagaaaagctctg
tcaaagatcacggaagtccggttcccggatacccgtctcttcccgctggactcagatcaa
gatgccactcttctcctcagacacctaggaagtcagaggcaaagaaagctgggtttccgt
tctagacggtcccatcttttggctcagcacgtcacctttacagcgaacagccccgtggag
gggactggcggtgggctgactgacctgggaaccctctgtgtatctgggtatgtccgtggc
cgtgctctccatgctgacagactggtgcacatcagtgggcatggagactttcagctgagt
caaatcgatgctccaccagaccctctgcccctcaacctgacaagaccaacaaaacctgga
aaaggaagagatgttgagatgcaggttggagatgaaaatgaggccccggtgcgggtgttg
atgaaagcggacctgtccaaccgggagagtctgcgggcggaggctgaggtagaccccatg
gatggagagcagacttggccgacagaacaggagctgttggaagctgaagaggccagcaag
atcaagcatgtgatgaaagttccaaagggaacatcggactaccaggccacatggatcgtc
gatgaagaggagaatggtgagacagaggaagaaagcagtgatgatgatgacctaatggat
gaagctatggatggagaggatgaggagaataactctcaggaggccggttcccattatgct
tcagaggaggaggatgatgtagaggaggaagaggagatgtgctccacagagagagctgga
gcagatcagcggtacgatgacaacgtggatgaagcagcagaagaagagggcctgaaacgc
tactgggaggctcgatcccatgagatgtttcctgatgaggtggacacgcccctagatact
ccagcaaggatcagattccagcgtttcagaggcctgaaaagtttccgctcctcaccatgg
gaccccatggagaacctgcctcttgattattcacgtatattccaattccagagttttgaa
cgcactcgccgtagaatcctggcagaggccgcagccgatgaggatggagccatggacggc
tggtacgtcacactgcacatcattgatgttcctttctctgtgatggcgagcgtccagtct
ggcaagcccctggtgctggtgtctctgttgccacacgagcagaagatgtcagtgatgcat
ctcttggtgcaaagacaccccagcaacacggagccaatcaaatccaaggaggaactggtg
tttcactgtggatttcgaaggtttcgggcctctcctatattctctcagcatactacagct
gacaagcataagatggagcgcttcctcaggccggatgcccctactgtggtgtcagtgtat
gcccccatcaccttcccccctacaggagtgctgctctttaaagaaagaaacgacggcgtc
caggatctggtggctacagggagtctgctcagttgcaaccctcagcgggtcgtcctgaag
aggatcgtgctgagtggacacccgttcaaaatcaacaggcgttcggctgttgtacggtac
atgttctttaacagagaggacatcatgtggtttaaaccagtagagctgcggacaaaatgg
ggcaggagaggccacattaaggaggctttaggaactcatggtcacatgaagtgcgtattt
gataatcagcttcgctcccaagacaccgtcctaatgaatttgtacaagagagtgtatcct
cgctggacgtatgacccgtatgtgcccccacaattaccttggttcaagaaagaggttact
gttgaaatggatgacttggacatggagtag
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