Girardinichthys multiradiatus (darkedged splitfin): 124883777
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Entry
124883777 CDS
T08099
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124883777 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmu03019
]
124883777 (dhx36)
03012 Translation factors [BR:
gmu03012
]
124883777 (dhx36)
Enzymes [BR:
gmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124883777 (dhx36)
Messenger RNA biogenesis [BR:
gmu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
124883777 (dhx36)
Translation factors [BR:
gmu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124883777 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
124883777
NCBI-ProteinID:
XP_047247059
LinkDB
All DBs
Position
18:39298540..39340783
Genome browser
AA seq
1066 aa
AA seq
DB search
MSYRYGGGGGRRSRKGGREYRDGSRERLDRGGGGGGRGPRGHGSDVDQDGGAGGGQRDRP
PPHLRGREIGLWYARYGAVRRKQADRRSRAVVHMDEAREEHITKLLNSVQNDQPGPMRDR
RDAQSSMSDNWGTAAGSSGHCYFDGDMPEEEKHKFGEEEGDTSKEKKASRSSQRGSSTAA
DKDEPPENWDEDDKDEAEKKKLIRNDKDLEFLFQELVRDSSMDDDLKRDLQSKKKDLNYK
EMLKFREKLPSHGKKEELVQLINSNRVLVVSGETGCGKTTQVTQFILDDHINRGRGSTCR
VVCTQPRRISAISVAERVAAERAESVGNGNSCGYQIRLQSRLPRRQGSILYCTTGIILQW
LRSDPLLSSISHLVLDEIHERNLQSDVLLIIVKELLNLRDDLKVILMSATLNAEKFSKYF
DKCPIIHIPGLTFPVEEFLLEDIVEMTRYRPQNQDRRPAWKRRFWQGRQSRSEKEEKELE
YKESWPCYARTLQGRYSDSTIEAVEMLDTDEKIDLELILALIRYIVLNEGEGAILVFLPG
WDNISSLNDLLMAQQMFRSEKFVIIPLHSLMPTVNQTQVFKRPPPGVRKIVIATNIAETS
ITIDDVIYVIDGGKIKETNFDTDNNISTMTAEWVSLANAKQRKGRAGRVQPGKCYHLYNG
LRSSLLEAYQLPEIMRTPLEELCLQIKILKLGSISRFLEKAMDPPSEKAVNLAIKNLTDL
NALDHAENLTALGFHLARLPVEPHIGKLILFGALLGCLDPVLTIAASLSFKDPFFIPLGK
EKMADMRRRTLSRDSKSDHLTIVYAFKGWEEAKQRGARYEREYCWDNFLSANTLQMLHNM
KGQFAEHLMHAGFVSSKDPKDPKSNVNSDNEKLIKAVIVAGLYPKVAMIRPSHSQKRPGV
KVYTHADGKVCIHPKSVNAEEREFNYTWLIYHLKMRTSSIFLYDCTEVSPFSLLFFGGDI
TIQKDEDQETIAVDRWIVFRSPARTAHLVKSLKKELDSLLQEKISNPAPVDWNNRQSKDC
AVITAIIDLITTQERPAASSKDDDRTWTSALRGKHVYFNEDDDNDD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcggtacggaggtggaggtggaagaagaagcagaaaaggaggtagagagtac
agggatgggagcagagagaggttagatagaggaggtggtggtggcggcagaggtcccaga
ggacacggttccgacgttgaccaggacggaggagcaggaggaggtcagagggaccgacct
cctccacatctgaggggccgggagattggcctgtggtacgcacggtatggagccgtgagg
aggaaacaagctgaccgcagatcgcgggcggtggtccatatggatgaggccagagaggag
cacatcaccaagttgcttaactctgtccagaatgaccagcctggcccaatgagagacaga
agggatgcacaatcctccatgtctgacaactgggggacggctgccggcagtagcggtcac
tgttactttgatggggatatgcctgaggaagagaaacataaatttggggaagaggaagga
gatacttctaaagagaagaaagcaagtcgctcatcacaacgtggctcgtctacagcggca
gataaagatgagccaccagaaaactgggatgaagatgataaggatgaggcggagaaaaaa
aaactgataaggaacgacaaggatctggagttcttatttcaggaactagtcagagactca
tcaatggatgatgacttgaaaagagatctgcaaagcaaaaaaaaggatctaaattacaaa
gaaatgctgaaattcagggaaaaactaccatcacatggaaaaaaagaggaactggtgcag
ctgatcaactctaaccgtgtcttggtagttagtggggagacaggatgtggaaagaccact
caggtcactcagtttatcctggatgaccacatcaatagaggcaggggttcgacgtgccgt
gtggtctgcacgcagcctcggcgcatcagtgctatctccgtagcggagcgtgtagctgca
gagagagcagaaagtgtcggaaatggaaattcttgtggttaccaaatccgccttcagagc
cggttgccacggagacaaggctccatactctactgtactacaggaattattcttcagtgg
cttcgctcagatccgttattatccagcattagccaccttgtgttggatgagatccatgaa
aggaaccttcagtcagacgttttgctcatcattgtgaaggaattactcaacctccgagat
gatctcaaagtcatcctgatgagtgccactctcaacgctgagaagttttctaaatatttt
gacaaatgtccaataatccacatccctgggttgacattcccggtggaagagtttttactt
gaagacatcgtcgagatgaccagatatcgtccacagaatcaggatcgtcgccccgcatgg
aagagacgtttttggcagggccgccaatccagatcagagaaggaggagaaggagctggaa
tacaaggaaagctggccatgttatgcacggacccttcagggcagatactctgacagcaca
attgaggcggtggagatgttagacactgatgagaagattgatctggagctgatcctggca
ctgatccgttatattgtgctcaatgagggggagggagcgatcttggttttcctgcctggc
tgggacaacattagcagtctcaatgacctccttatggctcagcagatgttccgatcagaa
aagtttgtcatcatccctctgcactccctcatgcctactgttaatcagacgcaggttttc
aagagacccccaccaggagttagaaagattgtgattgcaaccaatatagctgagaccagc
atcaccatagatgatgtcatttatgtgatcgatggaggcaagattaaggaaaccaacttt
gacactgacaacaacatcagcaccatgacggctgagtgggttagcttggccaacgccaaa
cagaggaaaggacgtgctggcagggtgcaaccaggaaaatgctatcatctgtacaatggg
cttaggtccagcctgctggaagcctatcaattacctgaaattatgaggacaccgctggag
gagctctgtttgcagataaagatattgaagcttggctccattagtcgatttttggaaaag
gccatggacccaccgagtgagaaggcagtcaacctcgccatcaagaacctcacagacctg
aatgccctggaccatgcagagaatctgacagctctgggcttccacttggcacgcctccct
gtggagccgcacattggcaaactgatcctttttggggctctgctaggatgcctcgaccct
gtactcaccattgccgcttcgctcagcttcaaagaccctttcttcatccccctgggtaaa
gaaaagatggcggacatgaggagaaggactctgtccagagactccaagagtgaccacctc
actattgtctatgcctttaagggatgggaggaagccaaacagcggggggccaggtatgag
agggagtactgctgggacaacttcctttctgccaacacactccagatgctacacaacatg
aagggtcagtttgccgaacatctcatgcatgctggctttgtcagcagcaaggatccgaaa
gaccctaaatccaatgtcaactcagataatgagaagttaattaaggcagtgattgtggct
ggactgtaccctaaggtggccatgatcagaccatctcacagccaaaagagacctggggta
aaggtgtacacccacgctgacggaaaggtgtgtattcatcccaaatctgtcaatgctgaa
gagagggagttcaattacacatggctcatttaccacctgaagatgagaaccagcagtatc
ttcctgtacgactgcactgaggtgtctccattctcgctgcttttcttcggaggagacatc
accatccagaaagacgaggaccaagagaccattgcagtcgaccggtggattgtcttcaga
tccccggcacgcactgctcatctcgttaagagtttgaagaaagagctggattcactgtta
caagagaaaatcagtaacccggctcctgtggactggaataaccgccagtccaaagactgt
gctgtcatcacagccatcatagaccttattaccacccaggaaaggcctgcagccagcagc
aaggatgatgacaggacgtggacgtctgctctgagagggaagcacgtttacttcaacgag
gacgacgacaacgatgattaa
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