Girardinichthys multiradiatus (darkedged splitfin): 124883829
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Entry
124883829 CDS
T08099
Name
(RefSeq) presenilins-associated rhomboid-like protein, mitochondrial isoform X1
KO
K09650
rhomboid-like protein [EC:
3.4.21.105
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmu01002
]
124883829
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124883829
Enzymes [BR:
gmu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
124883829
Peptidases and inhibitors [BR:
gmu01002
]
Serine peptidases
Family S54: Rhomboid family
124883829
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
124883829
Mitophagy factors
Parkin-dependent mechanism factors
124883829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
SgrT
TMEM100
Caps_synth_CapC
HlyE
Motif
Other DBs
NCBI-GeneID:
124883829
NCBI-ProteinID:
XP_047247161
LinkDB
All DBs
Position
18:50187939..50193988
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AA seq
367 aa
AA seq
DB search
MAWRSCSVLCRLTGGEPFLCSVRGGSRWPDSFQQRCGFKKAARKPEPKKPEDPVPAHTEP
SEAVVQNQVPIQTPFNSAPTFSRLVRPFLFTVGFTGCSFGSAAIWQYESLKSRVQGYFSE
LRADWLEKVRPQKRGDVRKEINQWWNSLTEGQKTVTGIIAANALVFCCWRVPSLQRFMVR
YFTSNPASKSLCSPMLLSTFSHFSFFHMAANMYVLWSFSSSAVSMLGREQFMAVYLSAGV
ISTFVSYVCKMATGRFGLSLGASGAIMTVLAAVCTKIPEAKLAIIFLPMFTFTASNALKA
IVAMDTAGLVLGWKFFDHAAHLGGALFGIWYILFGHELIWKNREPFVKLWHELRTRSSGG
GGPGGAA
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcctggagaagctgctcggtcctctgcagactgaccggaggagagccgttcctgtgt
tccgtgaggggaggcagcaggtggcctgacagcttccagcagagatgtggcttcaaaaaa
gccgccagaaaaccagaaccaaaaaagccagaggatccggttccagctcacactgagccc
tctgaggctgtggtccagaaccaggtccccatacagactcccttcaactccgccccaact
ttcagccgactcgtcaggccattcctcttcaccgtggggtttacaggctgctccttcggc
tcagcagccatctggcagtatgagtcactcaaatctcgagtacaggggtacttcagcgag
ctgcgagctgattggttggagaaggtgcgacctcagaaacgaggagatgtccgcaaagag
atcaaccaatggtggaacagcctgactgagggccagaagacggtcacaggaatcatagct
gcgaatgctctggtattctgctgctggagggttccctccctgcagcgcttcatggtcaga
tacttcacctccaacccagcctccaagtccctctgctctccgatgctcctctccaccttc
agccacttctccttcttccacatggctgccaacatgtacgtcctctggagcttctccagc
agcgccgtctccatgctgggcagagagcagttcatggccgtctacctgtctgcaggtgtt
atctctacgtttgttagctatgtttgtaagatggccacagggaggttcggtctgtctctt
ggagcgtccggagccatcatgaccgtcctggctgctgtttgcaccaaaatacccgaagcc
aaactggccatcatcttcctccccatgttcaccttcaccgcctccaacgctctgaaggcc
atcgttgccatggatacagcaggtttggtgctgggatggaagttctttgaccacgctgct
catttaggaggagccttgtttgggatatggtacatcctgtttggccacgagttgatctgg
aagaaccgagaacctttcgtcaaactttggcacgagctgagaacccggagcagtggcggc
ggcggtccaggcggtgcggcgtag
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