KEGG   Girardinichthys multiradiatus (darkedged splitfin): 124884304
Entry
124884304         CDS       T08099                                 
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b isoform X1
  KO
K06081  poliovirus receptor-related protein 1
Organism
gmu  Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03266  Virion - Herpesvirus
gmu04514  Cell adhesion molecules
gmu04520  Adherens junction
gmu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gmu00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    124884304 (nectin1b)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    124884304 (nectin1b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    124884304 (nectin1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    124884304 (nectin1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:gmu04515]
    124884304 (nectin1b)
   04090 CD molecules [BR:gmu04090]
    124884304 (nectin1b)
Cell adhesion molecules [BR:gmu04515]
 Immunoglobulin superfamily
  Nectin family
   124884304 (nectin1b)
CD molecules [BR:gmu04090]
 Proteins
  124884304 (nectin1b)
SSDB
Motif
Pfam: C2-set_2 Ig_3 V-set Ig_2 I-set ig Sema4F_C Insulin_TMD
Other DBs
NCBI-GeneID: 124884304
NCBI-ProteinID: XP_047248102
LinkDB
Position
18:43637880..43913660
AA seq 548 aa
MELFTGMLAFLLALQVQAGNGQSVQMDSSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
LVNATKQNVAIANPALGVSVLPPFKERVGFKQAAVRHRPPSLEDTTIVFSNLQLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPMTRMTLTTPTIVARGQKRKMTVATCVSANGKPPSVI
KWDTRLKGEATYQETRNQNGTVTVRSNYVVIPSRETHKQKLTCIVMYRSERITDSVVLNV
QYEPEVMIEGFDGNWYLNRQNVQLTCRADANPPVTIYQWKLLNGSIPSNVEIKNNTLFFK
GPVTYDLAGTYVCDATNGIGTRTGSVDVNITEKPMPQGPPGGVIGILGGVVAIGLIIGVA
VTVFMVHRRQQKTRTETDNDLIAVAAVADSCVTQAPEKPESPTRTDLPPAHKPAPPPPKK
KNSDMKGHLTSDDIQVVHLDKDDEMQKLPLQPPYYDMAPSESTPFTDKPEIGKQPEELLN
PAEYISYQQASNMEQVPESQSAPAYPPVTFLPQHPYTQHPTNEPMYSNTSFPTHTPRAAF
SFPKEQSV
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggagctgttcacggggatgttggcattcctgttggcgctgcaggtccaagctggaaat
ggccagagtgtacagatggactccagtaagtctggctttgtgggctcacaagtggagctg
cgctgcatcttcatcaatagcaaccccccggtaaagatctcccaggtcacctggcagaag
ctggttaatgccaccaagcagaacgtcgccatcgccaacccagccctgggcgtgtccgtc
ctgccccctttcaaggagcgcgtgggcttcaagcaggcggcggttcgccaccgcccccca
tcactggaggataccaccatcgtattctccaacctgcagctgtccgacgaggcggcctac
atctgcgagtacaccacgtttccagcgggcaacagggagaacatggtcaacctcacagtg
tttgctcggccaatgacgcgaatgaccctgacaaccccgacgatcgtggccaggggtcaa
aagcgcaagatgaccgttgccacttgcgtttcagccaacgggaagcccccaagtgtgatc
aagtgggacacgaggttgaagggggaagccacctaccaggagacccgcaaccaaaatggc
acggtgacggttcggagcaactatgttgtgatcccgagccgtgagacccataaacagaag
ctcacatgtattgtgatgtaccggagtgagcggatcaccgacagcgtggttctcaatgtg
cagtatgaacccgaggtgatgatcgaagggtttgatggaaactggtacctgaaccgtcag
aatgttcagctgacctgcagggccgatgccaacccccctgtgacaatttaccagtggaaa
cttctgaatggctcaatacccagcaacgtggagatcaaaaacaacactctgttctttaag
gggcccgtgacctacgacctggctggaacctacgtctgtgatgcgaccaacggcatcggg
acgcgcactggaagcgtggacgtcaacatcacagagaagccaatgcctcagggtccccca
ggtggtgttatcgggatccttggaggtgttgttgccattggactcatcattggtgtggct
gttactgttttcatggtccatcggcgacagcagaagactcgcactgagacagataatgac
ctcattgctgttgctgctgttgctgatagttgtgtgacacaggctccagagaagccagag
tcccccacaaggactgacctcccacctgcccacaaaccagctcccccaccacccaaaaag
aagaacagtgacatgaagggacatctgacatctgacgacatccaggtggtgcatctcgac
aaggatgacgaaatgcagaagctgcctcttcagcccccttattatgacatggcaccctct
gagtccacccccttcactgataaaccggaaattgggaagcaaccagaagagctgttgaac
ccggctgagtacataagctaccaacaagcctccaacatggaacaagtccccgagtctcag
tctgctccagcctaccctcctgttactttcttgccccagcatccttacactcagcaccca
accaacgagcctatgtactccaacacgagctttcccacccataccccccgagctgcattc
tctttccctaaggagcaatccgtgtga

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