Girardinichthys multiradiatus (darkedged splitfin): 124884304
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Entry
124884304 CDS
T08099
Symbol
nectin1b
Name
(RefSeq) nectin cell adhesion molecule 1b isoform X1
KO
K06081
poliovirus receptor-related protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03266
Virion - Herpesvirus
gmu04514
Cell adhesion molecules
gmu04520
Adherens junction
gmu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
124884304 (nectin1b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124884304 (nectin1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124884304 (nectin1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124884304 (nectin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124884304 (nectin1b)
04090 CD molecules [BR:
gmu04090
]
124884304 (nectin1b)
Cell adhesion molecules [BR:
gmu04515
]
Immunoglobulin superfamily
Nectin family
124884304 (nectin1b)
CD molecules [BR:
gmu04090
]
Proteins
124884304 (nectin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-set_2
Ig_3
V-set
Ig_2
I-set
ig
Sema4F_C
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
124884304
NCBI-ProteinID:
XP_047248102
LinkDB
All DBs
Position
18:43637880..43913660
Genome browser
AA seq
548 aa
AA seq
DB search
MELFTGMLAFLLALQVQAGNGQSVQMDSSKSGFVGSQVELRCIFINSNPPVKISQVTWQK
LVNATKQNVAIANPALGVSVLPPFKERVGFKQAAVRHRPPSLEDTTIVFSNLQLSDEAAY
ICEYTTFPAGNRENMVNLTVFARPMTRMTLTTPTIVARGQKRKMTVATCVSANGKPPSVI
KWDTRLKGEATYQETRNQNGTVTVRSNYVVIPSRETHKQKLTCIVMYRSERITDSVVLNV
QYEPEVMIEGFDGNWYLNRQNVQLTCRADANPPVTIYQWKLLNGSIPSNVEIKNNTLFFK
GPVTYDLAGTYVCDATNGIGTRTGSVDVNITEKPMPQGPPGGVIGILGGVVAIGLIIGVA
VTVFMVHRRQQKTRTETDNDLIAVAAVADSCVTQAPEKPESPTRTDLPPAHKPAPPPPKK
KNSDMKGHLTSDDIQVVHLDKDDEMQKLPLQPPYYDMAPSESTPFTDKPEIGKQPEELLN
PAEYISYQQASNMEQVPESQSAPAYPPVTFLPQHPYTQHPTNEPMYSNTSFPTHTPRAAF
SFPKEQSV
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggagctgttcacggggatgttggcattcctgttggcgctgcaggtccaagctggaaat
ggccagagtgtacagatggactccagtaagtctggctttgtgggctcacaagtggagctg
cgctgcatcttcatcaatagcaaccccccggtaaagatctcccaggtcacctggcagaag
ctggttaatgccaccaagcagaacgtcgccatcgccaacccagccctgggcgtgtccgtc
ctgccccctttcaaggagcgcgtgggcttcaagcaggcggcggttcgccaccgcccccca
tcactggaggataccaccatcgtattctccaacctgcagctgtccgacgaggcggcctac
atctgcgagtacaccacgtttccagcgggcaacagggagaacatggtcaacctcacagtg
tttgctcggccaatgacgcgaatgaccctgacaaccccgacgatcgtggccaggggtcaa
aagcgcaagatgaccgttgccacttgcgtttcagccaacgggaagcccccaagtgtgatc
aagtgggacacgaggttgaagggggaagccacctaccaggagacccgcaaccaaaatggc
acggtgacggttcggagcaactatgttgtgatcccgagccgtgagacccataaacagaag
ctcacatgtattgtgatgtaccggagtgagcggatcaccgacagcgtggttctcaatgtg
cagtatgaacccgaggtgatgatcgaagggtttgatggaaactggtacctgaaccgtcag
aatgttcagctgacctgcagggccgatgccaacccccctgtgacaatttaccagtggaaa
cttctgaatggctcaatacccagcaacgtggagatcaaaaacaacactctgttctttaag
gggcccgtgacctacgacctggctggaacctacgtctgtgatgcgaccaacggcatcggg
acgcgcactggaagcgtggacgtcaacatcacagagaagccaatgcctcagggtccccca
ggtggtgttatcgggatccttggaggtgttgttgccattggactcatcattggtgtggct
gttactgttttcatggtccatcggcgacagcagaagactcgcactgagacagataatgac
ctcattgctgttgctgctgttgctgatagttgtgtgacacaggctccagagaagccagag
tcccccacaaggactgacctcccacctgcccacaaaccagctcccccaccacccaaaaag
aagaacagtgacatgaagggacatctgacatctgacgacatccaggtggtgcatctcgac
aaggatgacgaaatgcagaagctgcctcttcagcccccttattatgacatggcaccctct
gagtccacccccttcactgataaaccggaaattgggaagcaaccagaagagctgttgaac
ccggctgagtacataagctaccaacaagcctccaacatggaacaagtccccgagtctcag
tctgctccagcctaccctcctgttactttcttgccccagcatccttacactcagcaccca
accaacgagcctatgtactccaacacgagctttcccacccataccccccgagctgcattc
tctttccctaaggagcaatccgtgtga
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