Girardinichthys multiradiatus (darkedged splitfin): 124884311
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Entry
124884311 CDS
T08099
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124884311 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124884311 (trip12)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124884311 (trip12)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
HECT type E3
124884311 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
124884311
NCBI-ProteinID:
XP_047248113
LinkDB
All DBs
Position
18:complement(21397587..21428853)
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AA seq
2065 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDQTVAGRLQSEQVKHKPNSPPESRRPNSKAPKAT
ASSATGQSRGHSSRRSGLTLSVASFVLQDDPEAAGTSEQERPGHQSKSESTRGLKRSEAP
DQISVLGPTPAKKPKSVPPPKSNISETKKGPAKSKKRQPASETPAPTGRSKSKKSAASAA
SPVQKRKKTDSFPGLSSTTGSLPNCTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSASS
SSSSSTTGTNSAATQGARLKQGKDQTKARRSRSASSPSPRRSTRDKEQAKTATSSKFEWA
TRFNPKVNLPKPKLSLPGTSKTETSKPGPSGIQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDDASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFE
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLKVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVDDSLSLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEEVCTNLLQQVASRDLLTNIQQLLVVTPPVLSSGMFIMVVR
MLSLMCSNCPSLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICE
LMPCLPREGIFAVDAMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDE
ISLSTLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKE
DPELAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSH
IASMLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESESFLVTSPPK
ACSSGTASLCTTTITSVSTTSANIATSDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLP
KRGPRRPKYSPPRDDDKADNQVFFAAKSPTSTQSPKSSFLASLNPKTWGKLGAQTNNANS
EPSRTAGVSGLARVPPKDSISNNRDKIKAWIKEQASKFVERYFNSENVDGSNPALNVLQR
LCTATEQLNLQVDGGLECLVEISNIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRDLLSR
DMRLRRFLNIFAGCPVPGIDPLGRLDPANNSAYLALVHKMNSCLSQMEQFPVKVHDFPSG
NGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLVVRGY
GRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAVRQYS
LQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEEGSKDTVGGKRGRAQTAPAKTS
PRNAKKQDELWHDGVCPGIANPLETYLTTEPPETITFDDPSLEVTLLLRILHSISRYWFY
LYDNAACKEIISTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFPFDTR
QMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINREDLLKQAESVMQ
DLGSSRAMLEIQYENEVGTGLGPTQEFYALVSQELQRADLGLWRGEEITLANPKGNQEGT
KYMFNSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFYKWML
RHETSISSHDLMNIDPGVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMNGCSV
EDLGLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFREGFES
VFPLHHLQYFYPEELDQLLCGSKSEMWDVKTLMECCRPDHGYTHDSRAIRFLFEVLSSFD
AEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPD
YSSIEIMREKLLIAAREGQQSFHLS
NT seq
6198 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccagacagtagctggaaggttgcagtcagagcaggtaaaa
cataaaccaaattccccacctgaaagtagaagacctaattctaaggctcccaaagccact
gccagttcagccactggccagtccagagggcacagctcaagaagaagtggtcttacccta
tccgtggcttcgtttgttttgcaagacgacccagaggctgcaggaacatccgaacaggaa
cgaccaggccaccaatcaaagagtgagagcacccgagggcttaaacgaagcgaagctcct
gaccaaattagtgtccttggacccacccctgccaagaagcccaaatctgtcccaccaccc
aaaagtaatatttcagagaccaagaaaggccctgctaagtccaagaagagacagcctgct
tcagagactcctgcaccgacaggtcgtagtaagagcaagaagagtgcggccagtgccgcc
tctccagtccagaaacggaaaaaaacagactctttcccaggtctaagtagcaccacaggg
tccctacccaattgcaccgaaggcagaactgcaaaaccaaccaagctggcgtctaaatcg
gccgcctcagccaaagctgggtgtagcaacgtgacagactcgtcctcctctgcctcctcc
tcttcctcttcctctaccacaggcaccaacagtgctgctacgcagggcgcccgtttgaaa
caaggaaaagatcagacaaaggctcgtcgttccagatcagcatctagtccctctccacgt
cgcagtacgcgagacaaggagcaggccaaaaccgccacctcttcaaaatttgagtgggca
acacgcttcaaccccaaagtcaacctgccaaaacccaaactttccttacctggaacctcc
aaaactgagacctccaaacctgggccatctggaatacaagctaaactagcaagtttgagg
aaatccacaaagaagcgtagcgagtctcctccagcagagctccccagttttcggcggagc
acacgccaaaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctgggc
aagcgcggggcagccgacgctcgccgacaggagaaaatggctgactccgacaacaaccaa
gatggggccaattcgtcagctgctcgcactgatgacgcctcacaaggagcttcagcttca
agctcagttgccggagcagtgggcatgaccacgtctggagagagtgagtctgatgattca
gaaatgggacggcttcaagctttactggaagccagaggactcccaccacatctttttgga
cccctgggaccccgcatgtcacagctgtttcacaggaccataggcagtggagccagttcc
aaggctcagcagctactgcagggccttcaggccacaggagatgagtctcaacagctccaa
gctgcgattgagatgtgccagctgctggtgatgggcaatgaggaaacacttggtggattt
ccggtcaagagtgtggtgcctgccttgattacactgttacagatggagcataattttgaa
attatgaatcacgcctcacgcgcgctcacctacatgatggaggcacttcctcgttcttct
gctgtggtggtcgatgctattcccgtcttcttggagaagcttaaggtgatacagttcata
gacgtagcagagcaggccttgacagccttggaaatgttgtcaaggcgtcacagcaaggca
attttgcaagctggcgggctcgctgactgtctcctctacctggagttcttcagcatcaat
gcccagaggaacgctttggccatagcagcgaactgctgccagagcattactccagacgag
ttccactttgttgatgattctctgtcactgttgactcagagactgacacatcaggataag
aagtctgttgaaagcacttgtctgtgttttgccagactggtagacaactttcaacatgag
gaggtctgtactaacctgctgcagcaggtggcatcgcgggacctattgaccaacattcag
cagctgctggttgtgacccctcctgttcttagctcggggatgttcatcatggttgtccgc
atgctttcgcttatgtgctccaactgcccgagtctggcagtccagcttatgaaacagaac
atagcagaaactctgcggttcctcttgtgtggagcatcaaatggaagctgccaggagcaa
attgagctggtgcctcgaagcccccaggaactctatgaactgacctccctcatttgtgaa
ctgatgccctgcctccccagagagggcatctttgcagttgatgctatgctgaagaaaggc
agtgctcaaacaacagagggtgcaatctggcagtggagggatgaccggggcttgtggcat
ccgtacaaccgcatcgacagccgcattattgagacggcccaccagaacggagaagatgag
atcagcttgtcgacgctgggccgtgtatacacaattgacttcaactctatgcagcagata
aatgaagacacaggaaccgcacgtggtatccagaggaagcctaatcctcttgccaatcct
aacacagggagtcaccaagaggttcgtcgagaagatgccagagcccagctgatgaaggag
gaccctgagctggcaaagtgctttattaaaacactgtttggggtcttgtatgaggtgtac
agctcatcggctggccctgctgtccgacacaagtgccttagagccatcctcaggatcatc
tactttgctgacgctgagctgctgaaggatgtgctgaggaaccatgctgtgtccagtcac
attgcctccatgctgtccagccaggacttgaagattgtggttggttctctgcagatggca
gagatcctcatgcagaagctgcctgatgtcttcagtgtctattttagaagagaaggtgta
atgcaccaagtaaagaaccttgctgagtctgagagctttcttgtcactagtcctccgaag
gcctgctccagtggcactgccagtctctgtaccacaacgatcactagtgtatccacaact
tcagctaacatagcgacatctgacctgggctcccccagcttccagcacagcatggacgac
tctctggacctcagtccacaggggcggttaagtgacgtcttaaagagaaaacgcctccca
aaaagaggacccagaaggcccaagtactctccgccaagagatgacgataaagcagacaat
caggtcttctttgcagccaagagccctaccagtactcagtcacccaagtcatccttcttg
gcaagcctcaaccccaagacctgggggaagctgggtgctcaaactaacaatgccaactct
gagccatcacgcacagcgggagtaagcggcctggcaagggtgccccccaaagactcgatt
tcaaataacagagacaaaatcaaagcctggattaaggagcaggctagtaagtttgtggag
cgctacttcaactctgagaatgtggacggcagcaaccctgctctcaatgttctccagaga
ctgtgcacggctacggagcagcttaacctgcaggtggatggtgggttggagtgcctggtg
gagatctccaacattgtatcagaatcggatgtgtcgtcttttgagatccagcacagcggg
ctggtgaagcagcttctggtctacctgacctccaacacagacagagacctgctcagccgc
gacatgcgactcaggaggttcctcaacatcttcgctggttgtccggttcctggcatagat
cctttaggtcgtctggatcccgccaataactctgcgtacctggcacttgtacacaagatg
aacagctgtctgagccagatggagcagttccctgtcaaggtgcacgacttccccagtggc
aacggcaatggcagcaggggatctcaggcgctgaagttcttcaacacacatcagctcaag
tgtcagctgcaaagacacccagactgcactaatgttaaacagtggaaaggtggccctgtg
aagattgaccccctggccctagtgcaagcaattgagaggtatcttgtggtcagaggttat
ggaagaatcagggaagaagatgaggacagtgatgatgacggctctgatgatgaaatagat
gaatcgctggcggcacagttcctaaattctggcagcgtgcgtcacagactacagttctac
attggtgatcacctgctaccatacaacatgacggtgtaccaggctgtacggcaatacagt
cttcaggcagaagaagaaagggagtctacagatgatgaagcaaatccacttgggagggct
ggaatctggaccaaaacgcacacaatatggtataagcctgttagagaagacgaggaaggt
agtaaggacacagtgggaggaaagagaggccgagcccagaccgctcccgctaaaacctca
ccacgcaacgccaagaaacaggatgagctgtggcatgacggtgtatgtcccggcatcgcc
aatcctttggaaacatacctcactacagagccaccagagaccataacctttgacgacccc
tctttagaggtcaccctgctgctgaggatcctacactccatcagtagatactggttctac
ttgtatgataatgctgcatgtaaggaaattatttcaacctctgagttcattaatagtaaa
ctgactgccaaagccaatcgtcagctacaagacccactggtcatcatgacggggaacatc
cctacatggctcattgagctgggaaagacctgccccttcttcttccccttcgacactcgg
cagatgctgttttatgtaaccgcctttgatcgagacagagccatgcaacgcctgctggac
acaaaccccgagatcaaccaatcagattctcaggacagcagagtcgcaccacgtctggat
aggaaaaagagaacgataaaccgtgaggatctattaaaacaggcagagtctgtgatgcag
gatctcggcagctccagggcaatgctggagattcagtatgagaatgaggtgggcacaggt
cttggtcccacacaggaattctacgctctggtatctcaggagcttcagagagcagatctt
ggtctttggagaggtgaagagattactctggccaatcctaaaggaaaccaagagggcacg
aagtacatgttcaactccagaggactgtttgcggttcccttcggcagaacaacaaaacca
gcacacatagctaaaattaaaatgaagttccgtttcttaggaaagttgatggccaaagcc
attatggactttagactgctggatctgccgttgggacttccgttctataagtggatgctg
cggcatgagacgtctataagctctcacgacttgatgaacattgatccaggtgtggccaag
tccatccagcacctggaggatatcattcgccagaagaagaggttggaacaggaccgatca
cagaccagggaaaccctccagcaggccctagagagcctgaacatgaacggctgctcagta
gaggacctgggtttggacttcactctgccaggattcccaaacatcgagctgaaaaagggt
ggaaaagacgtgccagtcacaatctacaacctggaggagtatctcaggttggtggtttac
tggactttaaatgaaggagtatcaagacaatttgagtcctttagggaagggtttgagtca
gtcttccccctgcatcacctgcagtatttctacccagaggagcttgaccagttgctgtgt
ggcagtaaatcagagatgtgggatgtcaagacgctgatggagtgctgtcgaccagaccac
ggctacacacacgacagccgggccattcggttcctattcgaggtgttgagcagcttcgac
gctgaacagcagcgactctttctccagtttgtcacaggaagcccaaggctgcctgtcgga
ggcttccggagcctgaacccccctctgacaattgtgaggaagacgttcgagtcgacggag
aacccggacgacttcctcccctcagtcatgacctgcgtcaactacctgaagctgcctgac
tactccagcatagagatcatgcgagaaaaactgttgattgctgctcgcgagggccagcag
tctttccacctttcctga
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integrated database retrieval system
