Girardinichthys multiradiatus (darkedged splitfin): 124884412
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Entry
124884412 CDS
T08099
Name
(RefSeq) protein Atg16l2 isoform X1
KO
K20868
autophagy-related protein 16-2
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124884412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124884412
03029 Mitochondrial biogenesis [BR:
gmu03029
]
124884412
Membrane trafficking [BR:
gmu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124884412
Others
Specific organelles associated proteins
Auto phagosome
124884412
Mitochondrial biogenesis [BR:
gmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124884412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_NWD2_C
ATG16
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
WD40_RFWD3
Cytochrom_D1
Beta-prop_NOL10_N
TFIIIC_delta
Ge1_WD40
FapA
Motif
Other DBs
NCBI-GeneID:
124884412
NCBI-ProteinID:
XP_047248282
LinkDB
All DBs
Position
18:50605391..50617082
Genome browser
AA seq
596 aa
AA seq
DB search
MDLGGASQRSGRSVETWRGHIIQQLKDRDRTQSAMFQDLIRFYTLLLEKTNLTKGILNHS
GRPPSEGCFHSSLQQQNSYLKKTTGELAYQAVELQQQIKIREWVLQEQQTRLQEEACRLA
GASDAKRALKEQVEQVEEKNKTLKTKYDALLQRQREAESKLREEKEKEERMLEDMMHQKK
QAAARLNHRNERRSRARQATVQKELQTAARSKVIVDSSSSAPTSRATSPKNEDKVEEDKS
TRRGPTRLFRSASATSPRFFFSSKFSIREMFDRKKRGRSVHSLEEDLLYPVGICLSARVP
ARPLQVLEAHEQGINAVRFSFGSDLLATGGTDRVIKVWDVRAGSLTHRATLDGSTEGITC
VEFDPTGRRILAASHNKSALLWRPDDSVPKVTLTGHSRKVTAARFTCVPHQVVTGSTDRT
VRLWDLNRAACVQQREVPSFCSDLVCSESSIISGHYDCKIRVWDSRTVNCVQELPSQGRV
TSLDLSSDRRKLLSCCRDDCLQLLDLRWSNDRLCFRADGFKCGSDSTKAVISPDGCYLAV
GSADGAVYIWNVSTGDLETRLPDQHSSSIAAVSWSLSGEYVVSVDRSRRAVLWSDI
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggatcttggcggagcgtcgcagcgaagcggccggtccgtagagacctggaggggccac
atcatccagcagctgaaggaccgagatcggacccagagcgccatgttccaggatctgatc
cgcttctacactctgctgctggagaaaaccaatctgaccaaagggatcctgaaccactcc
ggcagacctccctctgagggctgcttccattcatctctgcagcagcagaacagctacctg
aagaagacaacgggagagctggcctatcaggcggtggagctgcagcagcagattaagatc
agagaatgggtcctgcaggagcaacaaaccagactgcaggaggaggcgtgtcggctggca
ggagcgtctgatgctaaacgggctctgaaggagcaggtggagcaggtcgaagagaagaac
aagaccctgaaaacgaagtatgatgcactgctgcagcgtcagagggaggcggagtcaaaa
ctcagggaagagaaggagaaagaggagcgaatgctggaggacatgatgcaccagaagaag
caggccgctgcccgtctgaaccaccgcaacgaacgccgctctagagctcgacaggcaaca
gtacagaaggagctgcagacggctgccaggtcaaaggtcatcgtcgacagttcatccagc
gctccgacctccagggccacgtctccaaagaacgaagataaggttgaggaagataagtcc
accagacgaggaccgactcgtctcttcaggtcggcgtcggccacgtccccaaggttcttc
ttctcgtccaagttctccatcagagagatgtttgacagaaagaaaaggggtcgttcggtc
cacagcctggaggaggacctgctgtatccggtcggaatctgtttatcagccagagttcct
gccagacctctgcaagttctggaggcccatgagcaaggcatcaacgcggtgcggttcagc
tttggctcagaccttctggccaccggcgggacagatcgggtcatcaaagtttgggacgtc
cgagcaggctcgctgacccacagagccacgctggacggcagcactgaggggatcacctgc
gtggagtttgaccccacgggtcgcaggatcctcgcagcgtcccacaacaagtctgctctg
ctgtggcgcccggatgactccgttcccaaggtgactctaacgggtcacagcaggaaggtg
accgcagcccggttcacctgcgtcccccaccaggtggtgacaggaagcacagaccggacc
gtccggctctgggacctgaacagagctgcctgtgtgcagcagagggaggtgccgtcgttc
tgcagtgacctggtctgttctgagagcagcatcatcagtggacattacgactgcaagatc
agagtctgggacagcaggacggtgaactgcgttcaggagcttccttctcagggcagagtc
acctcattggacctgagctctgaccgccgcaagctgctcagctgttgccgtgacgactgc
ctccagctactggacctcaggtggagcaacgaccggttgtgcttcagggccgacggcttc
aagtgtggcagcgacagcaccaaagcggtcatcagccctgacggatgctacctggcagtc
ggatcagctgacggagccgtttacatctggaacgtctccaccggggacctggagacccgc
cttcctgaccaacacagctcgtccattgctgccgtgtcctggtctctctcaggagaatac
gtcgtcagcgtggacaggagccggcgggccgtgctatggagtgacatctga
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