Girardinichthys multiradiatus (darkedged splitfin): 124884417
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Entry
124884417 CDS
T08099
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu03440
Homologous recombination
gmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124884417 (brca2)
03460 Fanconi anemia pathway
124884417 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124884417 (brca2)
03036 Chromosome and associated proteins [BR:
gmu03036
]
124884417 (brca2)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124884417 (brca2)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
124884417 (brca2)
Chromosome and associated proteins [BR:
gmu03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
124884417 (brca2)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
124884417 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
124884417 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
124884417
NCBI-ProteinID:
XP_047248296
LinkDB
All DBs
Position
18:complement(32296454..32314917)
Genome browser
AA seq
3139 aa
AA seq
DB search
MDFFINNMYDGFKDEIWKELGPLDPNWFEELTAQASLDEGNVLDNDDLCANQEGNFKAPV
EKPATESQLFSTPKVFRHRRIVSSDTEDEPSFTAAQEKETLPWTATQSPCLFQVSKHSVS
GIKCVLPQSEERFDVLDTPKASARYDKHISESLGAQINPDISWTSSLNTPPALPSTLILS
KNDESPCPVSVTGDRNVVFVRKLFPSLSNFSLKTPKKSTVSSSSQGAVFPVASGCPDSPL
KSESHWQQKVPDAAEGEEVCRADGPKNAPSDFFVNSSLALRKVKPDRVKRKQIMLTNVAV
CSREDLSEADNGGCSDVAAANLESGGLPSTPLVKTGDTAISQWSPLSLSEISSCSVGSSK
TLQGDTDSVRLPGPSSNITDSGFIRKKRTFVYIVAATKSQVESQDSEFQKTGPSPKPSDC
EQEVNTESLQVTPAKAECQRTENQRELVGETITSSVGTKLQDIDMSQLCRDFAQEFNQMP
DLKIADDTQSNFSPAACLSAMKQAKQKAKQENLPNACSSICNNRHMTTSCQPCSIGEGTM
FDSGFQTGVADVTHMTSLSFGLPHLENVGRGRPLLGFKTDEHHFPSTNGSGKVKVDTELP
RQRSSKGQTPDHGKEIQLHIESTSTRQSWCREKTADDSKCGQPERTPVSLPSSNASGFKT
ASNKGIRISLANLERAKRLFEETEDKKTFRDHGTKTNHAINDNSNFSPETMKNSPTNSNP
PPYDGKSFKHISSQLTASEKADVTELCSLLEEADSQFEFTQYKPAKNIQNHQDKKEDSGS
DSGKHPEVTVMSEKIPSVVENRTNGMNKYTEMSVSASLDSLSENISEDRKCLKLGEPNIL
PGNKDTSELENNSTVMHGEAFRKAEGNVLKVSKTCLSKARALFADLENNLTDQKPSVKQN
KENAAKTEQKCNVGSDMCKKDSAFNLKESCDVGNNFENCFSKLGVVCSSKHVIIFGDKHD
TKGLKKNEADTKMGESGFRMASGKGISISARFMQEADAFFKDCQVMGHEEDENIKAPQPP
PESAVIKKSFSNLKSQQVSISKERGAGCTKLDDVNAGLIAHHTKGPHLDEVEMDSKFTSA
LKNEDGKPSSTSKPFSMLRTSKSIDSSAFEELRPGDGFCTASGKNVFVSAAAMRKAESLL
NQIHTPEEINNQPNQKEKTSKCHESSKIDNGGFQTVSRTKSAISSAALKKGGFFAASGKP
VVLSSEAWEKAKALFSDISLKMDNVSETAPARRDKKHEKYQSIAEIINNRDFTTADGVKD
HVSQKSLLKVKDHLKEFDNLVLAKAMQEEDALFTDCDLGSNSAMLDSVSKKEHLEKPFPA
QRVIINISEEVGKGCFRDTEQQKENILPQVSYGFKTASGGRVDVSFEALKRAETLLGECV
GVEEKRNAAPPESNAITLPLRNGGFQSASGKSVLPSSESLGKAKSLFSDISLGAEDPNIS
QTRISSKNQDSTNNTEKICCGFTTARGEKVDVLQKNLQKAKVLFKELDDLVLTKEVQDED
AFSADCDVGINNEMLGKDTKCKVNVGGSKRATVEKCYPDDKMRSNISMEAGCSRDLDKQG
EQREDILPQAGREFQTASGKRFAVLSEALKRAETVLREFEGIEDKTNAIVSQFKATAPPL
RNGGFHSASGKPIALSTEAVEKAKSFFGNMTFSAEDPDFSQTKKTDGKQGSQNKTEKICC
RFTTARGEKVDVSQKNLQKAKFLFKELDDLALTKAMQDADDIFKEEEGWTLEGNCKILSE
QTNKIPVNESGSIKGNMSKPNERETGSICEEPKNGSIKAKQNKGSSLPALNGGFQTASGK
TVAVSCEALSKAKLLLSENKADEDRTCVSLPLSEPPVTDPGLTNGGFFAASGKPVAFSSK
ALQKAKTFFGYISLNAALPHTGEENVHVSEKSLLKANLLREPAKGEGQYSFSRSANLQTP
VNPELSNVKNPERTSTLKSSPTSANRKNHSGVKSFLSVADSRSDSHEEVKSRLLVCDLST
KNSIKISEVTGTNESSDPELQSLNLTGCSETQHRFFAQEALDCTKALLEDEVLVGRTLLT
TAEHFQLPEDQESNGKSTEDDKRRKRRSSEDVTAQPPSKRRLLEEFARTTDGPRSSGLHP
VKSCPNGLMDRGVFKYSASHHPNVTRPHSFVDARLQRSTQTHHSDPGGGRSAPSKMPAFV
PPFIKNSKRDIPKNPEAEDRKRAPAFVPPFKKQRVVLQGVALDQQEANKQHHSLLLESNS
NKDAPLTKNSHSSTDVIPLVNSSVTDIVINQSVPVNVGPVSCTEMLPVDDRLSRSQDITQ
NIELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVERIPLKVALNGRNPGRYSAQELYE
WGVHKHVPEITCGNAESFRFNLLQFVKQESLADGGGVQLADGGWLIPSNDWTAGKEEFYK
ALCDTSGVDPKLISQQWVYNHYKWIVWKQASMEKSFPEMIGSLCLTPDQVLLQLKYRYDV
EVDHSRRPALRKIMERDDTPAKTLVLCVCEIVSRGHSLNVHSRSYTKTPKSAETKVETQF
AVIQLTDGWYAIKAQLDEPLTAMLHKGQLAVGGKLIIHGAQLVGSQDACSPLEAPDSLML
KIYANSTRRARWDTKLGFHRDPRPFLLPISCLYSNGGPVGCVDIIILRSYPIQWMERKSD
GGVVFRSARAEEKEARRFNSLKQKAIEMLFAKVQAEFEKEEEGSIKPQRRRQTISKQDIE
NLQDGEELYEAVGDDPADLETHLNEQQLETLRAYRCSLMEKKQAELQDRYRRALEAEDNE
KSCPKRDVTPVWRFCIADSRVQSSCVYQLNLWRPSSDLQSLLKEGCRFKVYNLVASDGKK
RSSVETVQLTGTKKTQFQELQASQEWLSSRFQQRVSTNFVDLQNEEFKPLCGDVDLIGYV
ISVIDQQGSSPAFYLVDGKLNFVKVRCFCSLSQAGLEDVLKPRVLLALSNLQLRGQSIYP
TPVVYAGDLTAFSTNPKEIHLQESLYQLKNIVQCQDNFFLTAEEKLAHIVKSDGMNSVCS
PSLQPQTPVSATDRRQDSKTSVTFQKPVRSLGSFTPVSSNLPAATSSAEKDPKSLKRKRA
LDYLSRIPSPPPISPLGSVVSPCVNKTFNPPRRSGTPSTLKPVQTAAPKPADSLVEDEWV
NDEELAMIDTQALHVGSLF
NT seq
9420 nt
NT seq
+upstream
nt +downstream
nt
atggattttttcataaacaacatgtatgacggctttaaagatgaaatctggaaagagctg
ggcccgttggacccaaactggtttgaggaactgacagcccaagcttctcttgatgaaggg
aatgtcttggataatgatgacctgtgcgctaatcaagagggtaatttcaaagctcctgtg
gagaagccggcaacagaaagccaactgttttcaacccctaaagttttcagacacaggcga
attgtgtcgtctgacactgaggatgagccgtcgttcacagctgcacaagaaaaagaaaca
ctaccatggacggcaacgcaaagtccttgtttgtttcaggtgtcaaaacatagtgtctca
ggcataaaatgtgtcctacctcaaagtgaggagagatttgatgttcttgataccccaaaa
gcctcagcccgctatgacaagcatatttctgaaagtctcggtgcacagatcaatcctgat
atttcttggaccagttctctgaatacaccaccagcattgccatctaccctgattttatct
aaaaatgatgagagtccctgcccagtgagtgttactggagacagaaatgttgtttttgta
cggaagcttttcccttcactttcaaatttctcacttaagacaccgaaaaaaagcaccgtg
tcttctagttcccaaggtgctgtttttcctgtggcgagtggctgccctgactctccattg
aagagtgaaagtcattggcaacagaaagtcccagatgccgctgaaggagaagaagtttgt
agggcagatggacctaaaaatgctccgtctgatttctttgttaacagcagtttggctctg
agaaaagtgaaacctgacagagttaaacgtaagcaaataatgctgacaaatgtagccgtt
tgcagccgtgaagatctctcagaagcagacaatggtggatgcagtgatgtggcagctgct
aatctggagtctggtggattaccttcaaccccattggttaaaactggagatacagcaatc
agccaatggtcccctttaagtttatctgaaatctcatcttgttctgtgggtagcagtaaa
acactgcaaggtgacacggattctgtccggctccccggaccatcatcgaacatcacagac
tctggatttattaggaaaaagagaacatttgtttacatcgttgcagctacaaagtcacaa
gttgaaagccaagactctgagttccagaagacgggtccctcaccaaagccctcagattgt
gaacaagaagtgaacactgagtcattgcaggtcaccccagctaaagcagagtgtcagagg
actgaaaatcaaagagaactagtaggagaaaccataacttcctctgtaggcacaaaactt
caggatatcgacatgtctcaactttgcagagattttgcacaggaattcaaccaaatgcct
gacttaaaaattgcagatgacactcaaagtaacttctctcctgcagcttgtctatctgct
atgaaacaagcaaaacagaaagcaaagcaagaaaaccttcccaatgcctgcagtagcatc
tgtaacaacaggcacatgactactagttgtcaaccttgctcaatcggtgaaggcacaatg
tttgacagcggtttccagactggtgtagcagacgtcactcatatgacttccttgtcattt
ggtcttcctcacttagagaatgttggcagaggccgacctttgttgggcttcaaaaccgat
gagcatcattttccatcaacaaatggaagtggaaaagtaaaagttgacactgaactgcct
cggcagagatctagcaaagggcagactccggaccatggaaaagaaatccagttgcacata
gagagcacatcaacaaggcagtcgtggtgtagagagaaaactgctgatgacagtaagtgt
ggtcagccagaaagaactcctgtttctcttccatcctccaatgcatcaggattcaaaacc
gcttcaaataaaggcatacgcatttccctcgccaacctggagagagccaagcgtcttttt
gaagagactgaagataaaaagacttttcgtgaccatggcaccaaaaccaaccatgccatt
aatgataatagtaactttagtcctgaaacaatgaaaaattcaccaactaactcaaaccca
ccaccctatgatgggaagtcatttaaacatattagttcccaattaacagcctcagaaaaa
gctgacgtgacagaactttgctctctcttagaagaggcagacagccagtttgaatttaca
caatacaaacctgcaaaaaatatacaaaaccatcaagataaaaaagaagactctggttca
gatagtggaaagcatccagaagtcactgttatgagtgaaaaaataccctcagttgtagaa
aacagaacaaatggcatgaataaatacacagaaatgtcagtgtcagcttctttagattcg
ttgtcggagaacatttctgaagacaggaaatgtctaaagttaggtgaaccaaatattctt
ccaggcaataaggatactagcgagctggagaacaacagtactgtgatgcatggtgaggct
tttaggaaggcagagggaaatgttttgaaagtctctaaaacatgtctgagcaaagcaaga
gctttgtttgcagatctggagaataacttgacagatcagaaaccatctgttaagcagaac
aaggagaatgctgccaaaacagaacagaaatgtaacgtgggttctgacatgtgcaagaag
gattcagctttcaacctcaaagaaagctgtgatgtagggaataactttgagaattgcttt
tccaaattaggagttgtctgttcaagtaaacatgtcataatttttggagataagcatgac
accaaaggtttgaaaaagaatgaagctgacacaaaaatgggtgaaagtggattcagaatg
gcaagtgggaaaggaatctccatttcagctagattcatgcaagaggcagatgcgtttttt
aaagactgtcaggtaatggggcatgaagaagatgagaacataaaggctcctcagcctccg
ccagaaagcgctgtaatcaagaaaagcttttcaaacctaaaaagccagcaggtcagcatt
tctaaagagagaggcgctgggtgtactaagcttgatgatgtaaatgcagggctgatcgca
catcacacaaaaggaccacatctggatgaagtggaaatggacagcaagtttacatcagct
ttgaagaatgaagatggaaaaccatcttcaacttcaaagccattttctatgcttcgcaca
tcaaagagcattgattcgtctgctttcgaagaattgcgcccaggtgatgggttctgtaca
gcttctgggaagaacgttttcgtgtctgctgctgcaatgaggaaggctgaatctcttttg
aatcagatccacacccctgaggagataaacaatcaacctaatcaaaaagaaaagacgtca
aaatgccatgagagctcaaaaatagataatggtggttttcaaactgttagtaggacaaaa
agtgcaatttcatcagcggctctaaagaaaggcgggttttttgcagccagtggtaaacct
gtcgtgttgtcatctgaagcctgggagaaggcaaaggcattattcagtgacatcagtttg
aaaatggataatgtgtcagaaactgctccggcaaggagggataagaaacatgaaaagtat
caaagtattgcagagattataaacaaccgtgatttcacaactgcagatggagtgaaggac
catgtgtcacagaaaagtcttttaaaagtgaaagatcatttgaaagaatttgataatttg
gttttagccaaagcaatgcaagaggaagatgctctcttcactgactgtgatctgggaagc
aacagtgcaatgttggacagtgtgagcaagaaggaacatcttgaaaaaccttttccagct
caaagggttataataaacatttctgaagaggttgggaaaggatgcttcagggatacagaa
caacaaaaagaaaacattttacctcaagtaagctatggatttaagaccgccagcggggga
agagttgatgtgtcatttgaagctctaaagagagcagaaaccttgttaggtgagtgtgta
ggagtcgaggagaaaagaaatgcagcaccgccggaatccaatgcgattactcttccactc
agaaatggtggatttcaatctgccagtggtaaatctgttctaccttcatcagagtccctt
ggaaaagcaaagtctctcttcagtgacatcagtcttggtgcagaggacccaaacatttca
cagacaaggataagtagcaagaatcaagacagtactaacaatacagagaaaatatgttgt
ggttttacaactgcaagaggagaaaaagttgatgtgttgcagaaaaatcttcaaaaggca
aaagtcctttttaaagaacttgatgatctggttttaaccaaagaggtacaggatgaagac
gctttctccgcagactgtgatgtgggcattaataatgaaatgttgggaaaggacacaaaa
tgtaaagttaacgtgggagggagcaaaagggccactgttgaaaaatgttatccagatgac
aaaatgaggtcaaacatttctatggaggctggatgctccagggatttagacaaacaaggg
gaacaaagagaagacattttaccacaagcaggccgtgaatttcagacagccagtgggaaa
agatttgctgttttgtctgaagccctaaagagagcagaaaccgttttaagggagtttgaa
ggaattgaggataaaacaaatgcaattgtgtcacaattcaaggctactgctcctccactc
agaaatggtgggtttcattctgccagtggtaaaccaatagcactttcgactgaggctgtt
gaaaaggcaaaatccttctttggtaacatgactttcagtgcagaagacccagatttttca
caaacaaagaaaactgatgggaaacaaggcagtcagaacaaaactgagaaaatctgttgt
aggtttacaactgcaaggggagaaaaagttgacgtgtcgcagaaaaatcttcaaaaggca
aaattcctctttaaggagcttgatgatttagctttaacaaaagcaatgcaagatgcagat
gacattttcaaagaagaggaaggctggaccttggaaggtaactgtaaaatattatcagaa
caaactaacaaaatacctgttaatgaaagtggcagcataaagggaaacatgtccaaacca
aatgaaagggaaacgggcagtatttgtgaagagcctaaaaatggttccatcaaagcaaaa
caaaacaaaggcagctctttgccagcgctgaatggtggatttcagacagccagtgggaaa
acagttgctgtttcatgtgaagctctctcaaaagcaaaacttctgctgagtgaaaacaag
gcagatgaggataggacttgtgtttcattgccactttctgagcctccggttacagatcca
ggtctcaccaatggtgggttttttgcagcaagcggtaaacctgtggcattttcatctaag
gccttacagaaagcaaagactttctttggctacatcagtctgaatgccgctcttccacac
acaggtgaagaaaatgttcatgtgtcagagaaaagccttttgaaagcaaatcttttgaga
gagcctgctaaaggggaaggccaatattcattctcaagatcagcaaacctacaaactcct
gtaaatccagaattatcaaatgtaaaaaatcctgaaagaacctcaaccctcaagtcttct
ccaacaagtgcaaatagaaagaaccactctggagttaagtcgtttctttcagtagcagac
agccggagtgacagccatgaggaagtaaagtcacgcttgttggtttgtgatttaagtact
aaaaacagcatcaagatatctgaagttacaggaacaaatgagtcttcagacccagaactt
cagtcattaaacctcactggctgctcagaaacccagcacaggttttttgcccaggaagct
ttggattgcacaaaggccttactagaagatgaagttctagttggccgaactctgttgacg
actgcagaacatttccaactgccagaagaccaagaatcaaacggcaaatctactgaagac
gacaaaaggaggaaaaggagaagttctgaagatgtaactgctcagcccccttctaaaaga
agattactggaagagtttgccagaaccactgatggtccaagaagttcaggactccatcct
gtaaaaagttgtccaaatggtttaatggacaggggagttttcaagtacagtgcctctcat
catccaaatgtcacaaggccacacagctttgtggacgcaagactacaaaggtcaacacaa
acacatcattcagacccaggaggtggaagatccgcaccttccaagatgccggcatttgtt
ccaccgtttatcaaaaactcaaagagagatattcctaagaatccagaggccgaagatcgc
aaaagagcccctgcgtttgttccaccgtttaaaaaacaaagggttgtcctacaaggggtg
gcccttgaccaacaggaggccaataagcaacatcattccttattattggagtctaacagc
aacaaagatgcaccacttactaaaaactctcacagctctacagatgttatccctttagtc
aattcttcagtcactgatattgtgattaatcaaagtgttcccgtaaatgtggggccagtc
agctgtacggaaatgttacctgtggatgacaggctttctagaagccaagacataactcag
aacattgagctggcccgggatatgcaggacatgaggatcaggaaaaagaagcgccagacc
attcgaccgctacctgggagcttatttctgacaaaaacctcaggggtggagagaatccca
ttaaaagttgcattaaatggacgtaacccaggaagatactctgcacaagagctgtatgag
tggggagtccataagcatgttccagagatcacctgtgggaacgctgaatcgtttcgcttc
aatttgctgcagttcgtcaaacaggaatcattagcagatggaggtggcgttcagctcgct
gatggaggctggttgatccccagcaatgactggacagcaggaaaagaggaattctataaa
gcattatgtgacacttctggtgtagatcctaaactgatcagccagcagtgggtgtacaat
cactacaagtggattgtgtggaagcaagcttctatggaaaaatcttttccagaaatgatt
ggcagcctctgcctcaccccagatcaggttctcctacagctgaagtacagatatgatgta
gaggtggaccacagccgcaggccagctctgaggaagatcatggaaagggacgacacacct
gccaaaactcttgttctgtgtgtctgtgagatcgtctccagaggtcactccctaaatgta
cacagccgcagctacaccaagacaccaaaaagtgctgaaaccaaagtggaaactcaattt
gcagtcatccagcttacagatggttggtatgccattaaagcacagctggatgaacctttg
actgcaatgcttcacaaaggtcagcttgctgttggtggcaaattgataatccatggagct
caactggtggggtcccaagacgcttgctcccctttggaggcaccggattctctcatgttg
aagatatatgccaatagcactaggcgtgcacggtgggacactaagctgggatttcacaga
gatccacgaccatttctgcttccgatctcctgcttatatagtaatggtgggccagttgga
tgtgttgatattatcatactcagaagctaccccattcagtggatggagaggaaatcagat
ggaggtgttgtgtttcggtctgctcgggcagaagagaaggaggcgagacgcttcaacagc
ctcaaacaaaaagcaatagagatgctgtttgccaaggttcaagctgaatttgaaaaagag
gaggaagggagtatcaaacctcagcgcagaaggcaaacaatcagcaagcaggatattgag
aacttgcaggacggggaagaattgtatgaagcagtcggagatgaccctgctgacctggag
actcatttaaatgaacaacagctggagactcttcgtgcctacaggtgttcactgatggag
aagaagcaggctgagctgcaggacagatatcgtcgtgccctggaggcagaggacaatgaa
aagagctgtccaaaaagagacgtgacacctgtatggagattctgcattgctgactcaaga
gtccagtccagctgtgtttatcagttaaatctttggcggccttcttcagatcttcagtct
ttactgaaggaaggttgtcgattcaaagtgtataaccttgttgcgtctgatggaaaaaaa
cgtagcagcgttgaaactgttcagctgaccgggacaaagaaaacacagttccaggaactt
caggcgtcccaagaatggctgtcatcgcgtttccagcaaagagtttccacaaactttgta
gatcttcaaaatgaggaattcaagcccctgtgtggagatgttgatctcataggatatgtc
atcagtgttatagatcaacagggttcctctcctgcattttatttggttgatgggaaactg
aattttgtgaaagtgcgctgtttctgcagcttgtctcaggccggccttgaagatgtgcta
aaaccacgtgtcctgttggcactgagcaacctgcagctcagaggccagtctatatacccc
actcctgttgtgtatgctggagatctgactgccttctctacaaaccccaaggagattcat
ctacaggaatccctttaccaactcaaaaacatagtccagtgtcaggacaacttctttcta
actgctgaggaaaaactggcacatatagttaagtctgatggcatgaactctgtctgctct
ccatctttgcaaccacaaacaccagtctctgcaacagatagaagacaagactcaaagaca
agtgtgacctttcagaaaccagttagaagccttggatcatttacacctgtcagcagtaac
cttcctgcagcaacatcttcagcagaaaaagaccctaaaagcctgaaaagaaaaagggct
ttggattatctttctcgcatcccgtctccaccgcctatttctcccctgggctcagtagtt
tcaccttgtgtaaataaaacattcaacccccctcggaggtctgggacacctagcacttta
aaacctgtacagactgctgcaccaaaaccagctgattctctggtggaagatgagtgggtg
aacgatgaggaactggcaatgattgatactcaggcattgcatgttggcagtttattttag
DBGET
integrated database retrieval system
