Girardinichthys multiradiatus (darkedged splitfin): 124884501
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Entry
124884501 CDS
T08099
Symbol
farsb
Name
(RefSeq) phenylalanine--tRNA ligase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124884501 (farsb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gmu01007
]
124884501 (farsb)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gmu03016
]
124884501 (farsb)
Enzymes [BR:
gmu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
124884501 (farsb)
Amino acid related enzymes [BR:
gmu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
124884501 (farsb)
Transfer RNA biogenesis [BR:
gmu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124884501 (farsb)
Prokaryotic type
124884501 (farsb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
PhetRS_B1
EF1_GNE
B5
EF-1_beta_acid
B3_4
Arc1p_N_like
PX
EAD7
GST_C_6
Motif
Other DBs
NCBI-GeneID:
124884501
NCBI-ProteinID:
XP_047248395
LinkDB
All DBs
Position
18:7463433..7482611
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AA seq
847 aa
AA seq
DB search
MPTVGVKRDFLFKALGRTYTDEEFDELCFEFGLELDEITSEKEIISREQGDSKASGASDV
ILYKIDVPANRYDLLCLEGLVRGLQVFKNKLEPPRYRRVSPDSGGPQRLIITKETAAVRP
HAVAAVLRNITFTQERYDSFIELQEKLHQNICRKRSLVAIGTHDLDTISGPFTYTAKAPG
DICFRPLNQTKEYTATQLMSLYRTDSHLRHYLPIIEDKPVYPLIQDSNGTVLSMPPIING
DHSRIRLQTKNIFIECTATDLTKAKIVLDIIVTTFSEYCAQPFTVEQAEVVYPDGKTCIY
PELAYRKEKLSAEFINKKVGISESTERIAQLLTRMCLLSQPTGVRDEIEVEIPPTRPDVI
HACDIMEDAAIAYGFNNITRTTPPTYTVANQFPLNKLTELLRQDMAAAGFTEALNFALCS
QEDIADKLGKKISQTRAIHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLQLFEISD
VVLKDESKDVGARNCRRFCAIYYNKTPGFEVIHGLLDRTMQLLEVKAARGEGYHIQAADD
STFFPGRCAEIFVRGKSVGRLGVLHPDVINRFELTMPCSALEMDIEPFLGHTAETLLTHD
VPMQETIKHQFPAHSQSQAALPSRTPTTKTVFGDMSSQAGLKALNDFLADRSYIEGFAAT
QADAAVFDAIPSPPSQAFCHVRRWYSHIKSFQTERVRLPSAKSQFVLPPTPPASTNNTSE
DDIDLFASDDEEESTEAARIREQRLAEYVAKKSKKPALVAKSSILLDVKPWDDDTDMAKL
EECVRSIAMEGLLWGQSKLVPVGYGIKKLQIGCVVEDDKVGTDLLEGAITAFEEYVQSVD
VAAFNKI
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtcggagtgaaacgagactttctctttaaagctttgggcagaacatacact
gatgaagagtttgacgaattgtgcttcgagtttgggctggagctggatgaaattacctca
gagaaggagatcatcagcagggaacagggcgactccaaggcttcgggagcatctgatgtt
attctgtacaagattgacgtgcctgctaaccgctacgacctgctgtgtctggaggggctc
gtccgtggtctgcaggtcttcaagaataagctcgagcctcctcgatacagacgtgtgagc
cctgacagtggggggcctcagaggttgatcatcactaaagagacggcagcagtgcgaccc
catgccgtggcagcagtgctaaggaacatcactttcactcaggagcgctatgatagtttc
atcgagctgcaggagaagctacatcagaacatctgcaggaagaggagcctggtggccatc
ggcacccatgacctggacaccatctccggccctttcacctacacagccaaagctcctgga
gacatctgcttcagaccgctaaaccagaccaaagagtacactgcaacccagctcatgagc
ctctacaggacagacagtcacttgaggcattatcttcctattattgaagacaaacccgtg
tatccactcatccaagacagcaacggtactgtcctgtctatgcctcctataatcaacggg
gaccattcaagaatccgtttacagacgaagaacatctttatcgagtgcacggcgaccgat
cttactaaggcaaagatcgtgttggacattattgtgaccacgttcagtgagtactgtgca
cagcctttcacggtggagcaggctgaagtggtgtacccggatgggaagacctgcatatat
cctgaactggcttacaggaaggagaagctgtctgctgagttcattaacaaaaaagttggc
ataagtgagtcaacagagagaattgctcagctcctaacccgaatgtgcctcctctcccag
ccaaccggtgtccgcgatgagatcgaggtggagatcccacccacccgtcctgatgtcatc
cacgcctgcgacatcatggaggacgccgccatcgcctacggttttaacaacatcacccgc
acaacgccacctacctacactgtagctaaccagttccctctcaataaactgacagagctg
ctgagacaagacatggcagctgctggcttcacggaggctctcaactttgctttgtgttct
caagaagatatagctgacaagcttggcaaaaagatctcacagacccgtgctattcatatt
tccaaccctaagactgcagagttccaggtggcgcgcaccactttacttcctggcctgctg
aaaactatagctgccaacaggaagatgccccttcctctccagctgtttgaaatatctgat
gtggtgctgaaggatgagagcaaagatgttggggcgagaaactgtcgccgtttctgtgcc
atttattacaacaaaactcccggcttcgaggtgatccacggcctgctggaccgaaccatg
cagctgctggaggtgaaggcagcccgtggagaggggtaccacatccaggctgcggacgat
tcaacctttttcccgggtcgctgtgctgagatctttgtccgcgggaagagcgtgggacgc
ttaggagtccttcacccagatgtcatcaaccgcttcgagctgaccatgccctgctctgcc
ctggagatggacatcgagccattccttggccacactgctgaaaccctcctgacacatgac
gttcccatgcaggaaaccatcaagcaccagtttccagcacacagccaatcccaggcagct
ctgccatcccgcacgcccacaactaaaacggtgtttggcgacatgagctcgcaggctggc
ctcaaggcgctcaatgatttcctggccgacagaagctatatagagggttttgcggcgacc
caagctgacgccgcagtgtttgatgccatcccctctcctccctcgcaggccttctgccac
gtccggcgctggtacagccacatcaagtccttccagacggagagagtgcgtcttccatca
gccaagagtcagtttgttctcccacccactccccccgcctccacaaacaacaccagtgaa
gacgacatcgaccttttcgcttctgatgacgaggaggagagcacagaggcagctagaatc
cgagagcagcgcctcgccgagtacgtcgccaagaaatctaagaagccagcgctcgtcgcc
aagtcctccatcctgctggatgtcaagccttgggacgatgacacagacatggccaagctg
gaggagtgtgtccgcagcatcgccatggagggcctgctgtgggggcagtccaagctggtg
ccagtgggctacgggatcaagaagctgcagatagggtgcgtggtggaggatgataaagtg
ggcacggatctgctggagggagccatcactgccttcgaggaatatgttcaatctgtggac
gtggctgccttcaataagatctga
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