Girardinichthys multiradiatus (darkedged splitfin): 124884539
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Entry
124884539 CDS
T08099
Symbol
lrfn1
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1
KO
K16354
leucine-rich repeat and fibronectin type-III domain-containing protein 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmu04515
]
124884539 (lrfn1)
04990 Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
124884539 (lrfn1)
Cell adhesion molecules [BR:
gmu04515
]
Immunoglobulin superfamily
SALM family
124884539 (lrfn1)
Domain-containing proteins not elsewhere classified [BR:
gmu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
124884539 (lrfn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
LRR_5
Ig_2
ig
fn3
LRR_9
Ig_DSCAM-DSCAML_C
C2-set_3
Protocadherin
Sp38
DUF4834
Motif
Other DBs
NCBI-GeneID:
124884539
NCBI-ProteinID:
XP_047248445
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Position
18:36474772..36696601
Genome browser
AA seq
755 aa
AA seq
DB search
MDRLVLCVLLCAALVKGYSCPGRCICQHLSPTLTLLCAKTGLLFVPPTIDRKTVELRLTD
NFITIIRKKDFLNMTSLVHLTLSRNTISQIVPHAFLSLRSLRALHMDGNRLSIIKSDHFK
GLSNLRHLILGNNQIHQVAPTSFDVFVFTIEDLDLSNNNLRSLPWEAIARMTNINTLTLD
HNLIDHIEAGTFTLLTKLVRLDMTSNRLQKLPPDSLFQHAQVLSDAKGSSSSTLAVSFGG
NPLHCNCELLWLRRLTREDDLETCASPEHLLDKYFWSIQEEEFICEPPLITKYYASKPYV
MEGQGVTLKCKAMGDPDPDIHWRSPDGKLVHNNSRTILYDNGTLDILITTLKDSGSFNCV
ASNAAGIATAAVEISMIPLPLFVNNTGHMREDPGLSDITTSSKAGNDTKGYDKHDRRVLV
TELTSSSAVIRWPSERHIPGIRMYQIQYNSTTDDTLVYRMIPSTSKSFLINDLAGGREYD
LCVLAVYDDGITSLTATRVVGCVQFHTASEVSQCRFMHSQFLGGTMIIIIGGIIVASVLV
FIIILMIRYKAYSSPVDSKAKVSSTMHSQTNGSQQRLQRSASRQPSDEGEAQAPKECMAL
VLRVDSEKKEDPAATTSILEVELPPNVDKIKRRSSMDAQRSGPPSEDTQTDSSLTGSTMS
LCLIGSNAGTKEAPRLKDKKSALASVGLLPNELARTRHRFSFDGGDYSIFQSHSYPRRAR
TRWHRSTNQLNMESSPLANRRVTFSSTEWMLESTV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggaccggctggttctgtgcgtgctgctgtgtgcagctctggtgaaaggctacagctgc
cccggccggtgcatctgccagcacctctcgcccactctgaccttgctttgtgcaaaaaca
gggttgctattcgtgccccccaccattgaccgcaagacagtggagctgcgacttacagac
aactttatcaccatcatccgcaagaaggactttctcaacatgaccagcttggtccacctc
accctatcccgaaacacgatcagccagatcgtcccccatgcctttctaagcctgcgctca
ctgagggctctccacatggatgggaatcgactcagcatcataaagagcgatcacttcaag
ggcctcagcaacctgcggcacctcattctgggaaacaaccagatccaccaagtggcccca
acttcctttgacgtgtttgtcttcactattgaggacttggatctttccaacaacaacctg
cgcagccttccatgggaagccatagccagaatgaccaatattaacacactcaccttggac
cacaacctaattgatcacattgaagcaggaactttcactctgctaactaaactggtccgc
ctggacatgacctctaatcgtttacagaagcttccgccagacagcctgttccagcatgct
caggtcttgtccgatgctaagggctccagctcatccaccctggctgttagctttggcggg
aatcctcttcactgcaactgcgagctgctgtggctgcgtcggctaactcgggaggacgac
ttggagacctgtgcctcgccggaacacctcttggacaaatatttctggtctatacaagag
gaggagtttatctgcgagcccccgctgatcaccaaatattacgcctctaagccctatgtc
atggaggggcaaggtgtaactttaaagtgcaaagccatgggggatccagacccagacatt
cactggaggtcaccagatggcaagctggtgcataacaactctcgcaccatcctgtatgat
aacggcacccttgatattctcatcactacgctgaaggacagcgggtcatttaactgcgtg
gcttccaatgctgcaggtatcgccacagctgctgtcgagatcagcatgatccccttaccc
ttgttcgttaacaacacaggccacatgcgtgaggaccccggcctttctgacatcaccacc
tcctctaaagccggcaacgacacaaaaggctacgacaagcatgacaggagggtgctggtc
acggagctgacctcttcctccgccgtgatccgctggccatctgaacgccacatccccggt
atcagaatgtaccagattcagtacaacagcacaacagatgacactttggtgtacagaatg
attccgtctactagcaagagctttctcatcaatgatctggctggaggacgggagtacgac
ctttgcgtgctggccgtgtacgacgacggcatcacgtcgctcacagccacacgtgtagtc
ggctgtgtgcagttccacacagccagcgaagtcagccagtgccggttcatgcacagccag
ttcctgggaggcaccatgatcatcattatcggcggcatcatcgttgcttcggtgctggtg
ttcatcatcatcctgatgatccgctacaaggcctatagcagccctgtcgacagcaaggct
aaggtcagttccaccatgcactcgcaaaccaatggcagtcagcagcggctgcagcgctcg
gcttccaggcagccatctgacgagggtgaagctcaagcacccaaagagtgcatggctctg
gtactcagggtggacagtgagaagaaggaggaccctgccgccactacctctatcctcgaa
gtggaattgcctccaaatgtggacaagattaagagaaggagcagcatggatgctcagcgc
tccggaccaccatcagaggacacgcagacagacagcagcctgacaggctccaccatgtcc
ctctgtctcataggctccaacgccggcactaaggaggctcccaggcttaaggacaagaaa
agcgccctggccagcgtgggattactccccaacgagctggcacgaactaggcacagattc
tcttttgacggtggggattattccatatttcagagtcatagttacccgcgcagagcgagg
acgaggtggcacaggtccaccaaccagcttaacatggaatcatcgccacttgccaacagg
agagttacatttagcagcactgagtggatgctggagagcactgtctga
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integrated database retrieval system
