Girardinichthys multiradiatus (darkedged splitfin): 124884564
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Entry
124884564 CDS
T08099
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169 isoform X1
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmu04121
]
124884564 (rnf169)
03400 DNA repair and recombination proteins [BR:
gmu03400
]
124884564 (rnf169)
Enzymes [BR:
gmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
124884564 (rnf169)
Ubiquitin system [BR:
gmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
124884564 (rnf169)
DNA repair and recombination proteins [BR:
gmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
124884564 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZR_2
Motif
Other DBs
NCBI-GeneID:
124884564
NCBI-ProteinID:
XP_047248495
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All DBs
Position
18:50848601..50857130
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AA seq
624 aa
AA seq
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MGDVRAFILKILTPATAASRRCVPAPRLAGCTSSFRSRCFRQGAGFVFRADLRDKMATAG
FAERRASPAGTVVNTSRSGPGTARAARYRSGSGPPEKCLACSENRSGSGSACSRCLARRV
PGREERIRRRSDPERGSSRAGKRDSESRREVFICPTLLPKSADGTSGPTGKHKLLVSDDR
DEMRRWNSLMGKDEPGSVRRVVEPGVLSDSENEEPISRRIRNISAFIRKTKNSSAVSSGS
QRSRSCTDSMEDRGQKMKVIVPPVAIMERVGISHSSAAGILLSSENSRSISAPITAPDRR
FTWRAVLTSSAPLSLPPPRAERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRLVE
PTIVKATPRNLSRSLQKATSYEASPAVLQKWRQIELDRQGLKVNSRATLTSPVSELGKTN
GGGGASKTRQHRAGVELSNRRRLLFEPPDMDNFQKQSMKIRVPAVRYSCGTTLRGCSDFE
PGGGMPEPCGGPAPFSRKHSFSPCNSSRFQPGKFVPKDTSSPRKEWDSTIHDQSTSRRGK
KRNQKTKHLDPALDLDLKRRRPGLQQEAIQQERQDRAFALKLQKQFNLEICRTSPNRYFL
RSWKSTQNRRRRGLRTSRRISKKV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatgtgcgtgcttttattttgaaaattctgactcccgccacagcagcctcgcgc
cgctgtgtcccggccccgcggttggcgggctgtacgtccagctttcgctcgcgctgtttt
cggcagggggcggggtttgtttttagagcggacctgagagacaagatggcgaccgcaggg
tttgccgaacgtcgagccagtccggccggcaccgtcgtaaacacgtcccggtcagggccc
ggcaccgccagggccgcccggtatcgctcaggttccggcccgccggagaagtgcttagct
tgctcagagaaccggtctgggtccggctcggcctgttcccggtgcctggcccggagagtc
ccgggcagagaggagagaatccggagaagaagtgaccccgagagaggcagcagtagagcg
ggaaagagggacagcgagagccggagagaggtcttcatctgtccaaccctcctcccgaag
tctgcagacggtacttcaggtccaacagggaaacacaagctcctggtgtctgacgacagg
gatgagatgaggaggtggaactctctgatgggcaaagacgaacccggatcagtccgacgt
gttgtcgagccgggagttctgtcggactcggagaacgaggagccaatcagcaggaggatc
aggaacatctctgcattcatcaggaaaaccaaaaactcatctgctgtcagcagtggttct
cagaggagtcgtagctgcaccgattcaatggaggacagaggacaaaagatgaaggtcatt
gtcccgcctgtggccataatggagcgggtgggaatcagccacagctcggcagctggaatc
ctgctgtcatctgagaatagccgctccatctccgctcccatcaccgctcccgaccggagg
ttcacctggagggcggtgctgacatcctcggctcctctgagtctgccgccgcccagagcc
gagcgctccatcagtccagagagcaacgacagcatctctgaggagctcaaccacttcaag
cccatcgtctgctcaccatgcaccccgcccaaacggctgccggacggccgcctggtggag
cccaccatcgtcaaggcgacgcctcggaacctgagccgcagcctgcaaaaggccaccagt
tatgaggcaagtccggccgtcctgcagaagtggaggcagatcgaactggaccgacagggc
ctaaaagtcaattccagggccactctcaccagtcctgtctctgagctcggcaagacaaac
ggagggggcggagcctcaaagacgcgtcagcatcgagccggcgtagagttgtcaaacagg
aggaggctgctgttcgagcctccagacatggacaacttccagaaacaatccatgaagatc
cgggtccctgctgtccgctacagctgtggcaccaccctgagaggatgttcggactttgag
ccaggaggcggtatgcctgagccctgcggcgggccggcgccgttcagccggaaacactca
ttctcaccatgcaatagctccagattccagcctggaaaatttgtgccaaaggacacttca
agtcccaggaaggagtgggacagcaccatccacgaccagtctacctcaaggaggggcaag
aagagaaaccagaagaccaaacacctggatccagctctggatctggacctgaagaggagg
cggccaggcctccagcaggaggcgatccaacaggagcgacaggacagagcatttgccctc
aaactgcagaaacagttcaacctagagatctgcaggaccagccccaacaggtatttcctg
cggtcctggaagtccacccagaaccgcaggaggcggggcctgaggacatccagacgaatc
agcaagaaggtctga
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