Girardinichthys multiradiatus (darkedged splitfin): 124884568
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Entry
124884568 CDS
T08099
Symbol
scarf1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
gmu
Girardinichthys multiradiatus (darkedged splitfin)
Pathway
gmu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124884568 (scarf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmu04131
]
124884568 (scarf1)
Membrane trafficking [BR:
gmu04131
]
Endocytosis
Phagocytosis
Scavenger receptors
124884568 (scarf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_Teneurin
EGF_2
Motif
Other DBs
NCBI-GeneID:
124884568
NCBI-ProteinID:
XP_047248507
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All DBs
Position
18:complement(26173107..26183667)
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AA seq
900 aa
AA seq
DB search
MFLRALSTLLCCSLSSAQTLDPGGKNVCKDSRDSTLVCCSGWRQQGKQCTMPVCEGEHAC
LENEICMFPGVCRCPPGYYGAQCKTRCPSEFWAPDCRLVCPCYPHGHCNPVTGECTCNST
RWGPLCQNTCKCTRNGRCHPVNGNCICDKGWWSPTCSKTCQCSGGGSMDSSCDPLTGRCQ
CYRGYWGMKCLGRCNCNQSPCNERTGVCECEAGSWGPSCDRKCNCDLSHSTCDPASGQCL
CQPGYMGDSCNYPCKAGVYGIGCKMRCGYCKDNQPCSSTDGACAACEPGWNGTRCDRPCS
PGFHGDGCKNKCPRCRKNETCDPKTGKCFRCDPGWTGPRCEEPCSDGTFGDACHFLCNPC
FHGNCHHVTGRCVCQPGFQGESCNSTCPALLFGLNCSSICDCGEGVSCHPVTGTCPYSGR
GAVLAGVLVPLFLLFFAVLCCCLCCGGGPADGKNSAIVADGGLLVRMKYHVYSVLANIGA
ALPCMSDWSSGLPRVTVSHHDPELTFNHSFIEPPSSGWVTEGSSFDSDEEEGEALYCVPP
REDIPAVAGGEFQEMSSKCNMFLDPSGFSSEDITSSFNIPRTSSIAKSKRPSVSFAEGTR
FSPKERSGSGQDPGAPPRSKAKTTWGVLMLSALQGQGGTARTGEEDGTEEEERENGENVQ
TTENQESSFEVVDQEVDKTPSYVNLQVPGTSGRRRTMSNTAAHKGTPPLTSDGEVGASHK
ITTVYVTVTKAGRPITKTESSSEGPVQAMLRRLGSLQRQKEQDGGKSKSKAAEGITKPPR
RKLGVRAAVWEQGGPSGVEPKPIRRKKAFNAASEAPPSEGNTPKRPLSSILKSVPEVAAT
ACGSGPRGEGGTMQGVDAAAGLIESSYLTVGPAGEATQFITNQGAANDEPCYENVLITQP
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcagagctctgagcactctgctctgctgctcgctgtcatctgcacagacactg
gatcctggtgggaaaaatgtttgcaaggattcaagggactccaccctggtctgttgctct
ggatggcgtcagcagggaaaacagtgcaccatgcctgtctgtgaaggtgaacacgcgtgt
cttgagaatgagatctgtatgtttcctggagtgtgtcgctgcccacccggctactacgga
gctcagtgtaaaacacgctgtccttctgagttctgggccccagactgccgtctggtgtgt
ccgtgctaccctcatggccactgtaatcctgtcactggcgagtgtacatgcaactccacc
cgctggggtcccctttgccagaacacctgcaagtgcactcgcaatggccgctgccaccct
gtcaacggaaactgcatctgcgataaaggctggtggtccccgacctgctccaaaacgtgc
cagtgctccggtggtggatccatggactccagctgtgacccactaacaggccgctgccag
tgctacagggggtactggggtatgaaatgcctcggcagatgcaactgtaaccagtctccg
tgtaatgagcggactggcgtgtgtgagtgtgaggcaggctcctggggacccagctgtgac
aggaaatgtaactgtgacctctcacacagcacctgtgacccggcctctgggcagtgcctt
tgccaaccaggttacatgggtgattcatgcaactacccttgtaaggctggagtctatggc
attggctgcaaaatgagatgtggttactgtaaagacaaccagccgtgctcatccactgac
ggtgcctgtgctgcctgtgaacccggctggaatggcacacgatgtgaccgtccgtgctcc
cctggttttcacggcgatggctgcaagaataagtgtccgcggtgcaggaaaaatgaaacc
tgtgatccaaaaaccgggaaatgtttcaggtgtgaccctggatggaccggacccaggtgt
gaggagccctgctctgatgggacgtttggagacgcctgccacttcttgtgtaatccctgt
tttcatggcaactgccatcatgtgacaggaagatgtgtctgtcagccaggttttcaagga
gaaagctgtaacagcacctgtcctgctctgctgtttgggctcaattgttcgtccatctgt
gactgtggtgagggggtcagctgccaccctgtcactggtacctgcccctacagtggaaga
ggcgctgtgcttgcaggcgtactggttcctctgttcctgctgttttttgccgttctctgt
tgctgcctgtgttgtggtggaggtccggctgatgggaaaaacagtgctattgtggctgat
ggaggtctgttggtcaggatgaaatatcacgtctacagtgtcctggcaaacatcggtgct
gccctgccctgtatgtctgactggtcctccggcctgcctcgggtcactgtgtctcatcat
gacccagagctgacttttaaccacagcttcattgagcctccgtcctctggctgggtcact
gaggggtcgtccttcgacagcgatgaagaggagggagaggctctctactgcgttcctcca
agagaagatatcccagccgtggcgggtggggagttccaagagatgagctccaagtgtaac
atgttcctagacccatctgggttcagcagcgaggacatcacctcgtccttcaacattcct
cgcacctccagcattgccaagtccaagcggccgtctgtgtcatttgctgagggcacccgc
tttagtcctaaagagaggagtggatctggtcaggaccctggtgctcctccacgcagcaaa
gctaagaccacctggggggttctgatgctgtcggccctccaaggtcaggggggcaccgct
aggactggggaagaggatggaactgaggaagaggagagggaaaatggggaaaatgttcaa
acaacagagaaccaggagtcaagctttgaggttgtggaccaggaagttgacaaaacccca
tcatatgtgaatttacaagttcctgggacatcaggacgaagacggaccatgtccaacaca
gctgctcataaaggaaccccgccgctgacatctgatggcgaggtgggagcttctcataag
attactacagtatatgtgacagttactaaagctggcaggcccataacaaaaacagagtcg
agctctgaaggacccgtccaggccatgctgcgcagactcggcagcctgcagagacaaaaa
gaacaggacggtgggaagtcaaagtcaaaggcagctgaggggatcacaaaacccccaaga
aggaagctgggagttcgggctgccgtgtgggagcagggaggcccatcaggagtggagcct
aagccaatcaggcggaagaaggcctttaatgctgcttcagaggctcctccatcagaggga
aacactccaaaacggcctctctcatcgatcctgaagagcgtcccggaagtggccgccact
gcttgtgggtcaggtccaagaggtgaaggaggaaccatgcagggggtggatgcagctgca
ggactaatagagagcagctatctgacagtgggaccagcaggagaggccactcagtttatc
accaaccaaggagcagcaaacgatgaaccctgctatgaaaatgtcttaattacacaacca
taa
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